RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 NLRP1Q9C000 1473 aa34.91■■■■□ 3.18
GTF2A1-201ENST00000298173 STAG3Q9UJ98 1225 aa34.89■■■■□ 3.18
GTF2A1-201ENST00000298173 ZFYVE9O95405 1425 aa34.89■■■■□ 3.18
GTF2A1-201ENST00000298173 GPRASP1Q5JY77 1395 aa34.89■■■■□ 3.18
GTF2A1-201ENST00000298173 KIAA1210Q9ULL0 1709 aa34.87■■■■□ 3.17
GTF2A1-201ENST00000298173 EIF4G2P78344 907 aaKnown RBP eCLIP34.87■■■■□ 3.17
GTF2A1-201ENST00000298173 NBPF1Q3BBV0 1214 aa34.87■■■■□ 3.17
GTF2A1-201ENST00000298173 VGFO15240 615 aaPredicted RBP34.86■■■■□ 3.17
GTF2A1-201ENST00000298173 UBR1Q8IWV7 1749 aa34.85■■■■□ 3.17
GTF2A1-201ENST00000298173 ROCK2O75116 1388 aaKnown RBP34.85■■■■□ 3.17
GTF2A1-201ENST00000298173 HSPA5P11021 654 aaKnown RBP34.83■■■■□ 3.17
GTF2A1-201ENST00000298173 CARD11Q9BXL7 1154 aa34.83■■■■□ 3.17
GTF2A1-201ENST00000298173 PIK3C2GO75747 1445 aa34.83■■■■□ 3.17
GTF2A1-201ENST00000298173 LAMC1P11047 1609 aa34.83■■■■□ 3.17
GTF2A1-201ENST00000298173 PLPPR3Q6T4P5 718 aa34.82■■■■□ 3.17
GTF2A1-201ENST00000298173 HIRIP3Q9BW71 556 aaPredicted RBP34.8■■■■□ 3.16
GTF2A1-201ENST00000298173 SETD1BQ9UPS6 1966 aaKnown RBP34.79■■■■□ 3.16
GTF2A1-201ENST00000298173 PTPRMP28827 1452 aa34.77■■■■□ 3.16
GTF2A1-201ENST00000298173 NUTM2DQ5VT03 806 aaPredicted RBP34.77■■■■□ 3.16
GTF2A1-201ENST00000298173 USP47Q96K76 1375 aa34.77■■■■□ 3.16
GTF2A1-201ENST00000298173 MYO3AQ8NEV4 1616 aa34.77■■■■□ 3.16
GTF2A1-201ENST00000298173 CFAP70Q5T0N1 1121 aa34.76■■■■□ 3.16
GTF2A1-201ENST00000298173 C14orf93Q9H972 538 aaKnown RBP34.76■■■■□ 3.16
GTF2A1-201ENST00000298173 RIMS2Q9UQ26 1411 aa34.76■■■■□ 3.16
GTF2A1-201ENST00000298173 TMEM2Q9UHN6 1383 aa34.72■■■■□ 3.15
GTF2A1-201ENST00000298173 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.7■■■■□ 3.14
GTF2A1-201ENST00000298173 SETBP1Q9Y6X0 1596 aa34.69■■■■□ 3.14
GTF2A1-201ENST00000298173 HDGFP51858 240 aaKnown RBP34.67■■■■□ 3.14
GTF2A1-201ENST00000298173 CEP170BQ9Y4F5 1589 aaPredicted RBP34.66■■■■□ 3.14
GTF2A1-201ENST00000298173 IQGAP1P46940 1657 aa34.65■■■■□ 3.14
GTF2A1-201ENST00000298173 SLIT1O75093 1534 aa34.65■■■■□ 3.14
GTF2A1-201ENST00000298173 ARHGAP23Q9P227 1491 aa34.64■■■■□ 3.14
GTF2A1-201ENST00000298173 THEMISQ8N1K5 641 aaPredicted RBP34.64■■■■□ 3.14
GTF2A1-201ENST00000298173 ADGRB1O14514 1584 aa34.64■■■■□ 3.14
GTF2A1-201ENST00000298173 ZNF142P52746 1687 aaPredicted RBP34.63■■■■□ 3.13
GTF2A1-201ENST00000298173 SCAF11Q99590 1463 aaKnown RBP34.62■■■■□ 3.13
GTF2A1-201ENST00000298173 ST20-MTHFSA0A0A6YYL1 179 aa34.61■■■■□ 3.13
GTF2A1-201ENST00000298173 KDM4FA0A1W2PPD8 638 aa34.6■■■■□ 3.13
GTF2A1-201ENST00000298173 ALKQ9UM73 1620 aa34.57■■■■□ 3.13
GTF2A1-201ENST00000298173 LTKP29376 864 aa34.57■■■■□ 3.13
GTF2A1-201ENST00000298173 C11orf95C9JLR9 678 aaPredicted RBP34.55■■■■□ 3.12
GTF2A1-201ENST00000298173 NRXN3Q9Y4C0 1643 aa34.55■■■■□ 3.12
GTF2A1-201ENST00000298173 TMEM132EQ6IEE7 984 aa34.54■■■■□ 3.12
GTF2A1-201ENST00000298173 TXNDC2Q86VQ3 553 aa34.53■■■■□ 3.12
GTF2A1-201ENST00000298173 SETD1AO15047 1707 aaKnown RBP34.52■■■■□ 3.12
GTF2A1-201ENST00000298173 ASXL1Q8IXJ9 1541 aa34.52■■■■□ 3.12
GTF2A1-201ENST00000298173 WASHC2AQ641Q2 1341 aa34.51■■■■□ 3.11
GTF2A1-201ENST00000298173 POLR1AO95602 1720 aaPredicted RBP34.51■■■■□ 3.11
GTF2A1-201ENST00000298173 DIEXFQ68CQ4 756 aaKnown RBP34.5■■■■□ 3.11
GTF2A1-201ENST00000298173 EID1Q9Y6B2 187 aa34.5■■■■□ 3.11
GTF2A1-201ENST00000298173 TESK2Q96S53 571 aa34.5■■■■□ 3.11
GTF2A1-201ENST00000298173 PLEKHG1Q9ULL1 1385 aa34.49■■■■□ 3.11
GTF2A1-201ENST00000298173 SENP3Q9H4L4 574 aaPredicted RBP34.47■■■■□ 3.11
GTF2A1-201ENST00000298173 EIF3AQ14152 1382 aaKnown RBP34.46■■■■□ 3.11
GTF2A1-201ENST00000298173 CCDC7Q96M83 1385 aa34.44■■■■□ 3.1
GTF2A1-201ENST00000298173 ADAMTS13Q76LX8 1427 aa34.43■■■■□ 3.1
GTF2A1-201ENST00000298173 KIF7Q2M1P5 1343 aa34.42■■■■□ 3.1
GTF2A1-201ENST00000298173 TRAK1Q9UPV9 953 aa34.41■■■■□ 3.1
GTF2A1-201ENST00000298173 MED14O60244 1454 aa34.41■■■■□ 3.1
GTF2A1-201ENST00000298173 YTHDC2Q9H6S0 1430 aaKnown RBP34.4■■■■□ 3.1
GTF2A1-201ENST00000298173 DDX10Q13206 875 aaKnown RBP34.38■■■■□ 3.09
GTF2A1-201ENST00000298173 ARHGEF28Q8N1W1 1705 aaKnown RBP34.37■■■■□ 3.09
GTF2A1-201ENST00000298173 ANKLE2Q86XL3 938 aa34.36■■■■□ 3.09
GTF2A1-201ENST00000298173 METP08581 1390 aa34.36■■■■□ 3.09
GTF2A1-201ENST00000298173 BCANQ96GW7 911 aa34.34■■■■□ 3.09
GTF2A1-201ENST00000298173 LRPPRCP42704 1394 aaKnown RBP34.33■■■■□ 3.09
GTF2A1-201ENST00000298173 SBNO2Q9Y2G9 1366 aa34.33■■■■□ 3.09
GTF2A1-201ENST00000298173 CENPJQ9HC77 1338 aaPredicted RBP34.32■■■■□ 3.09
GTF2A1-201ENST00000298173 TBX22Q9Y458 520 aa34.32■■■■□ 3.08
GTF2A1-201ENST00000298173 ABCC11Q96J66 1382 aa34.31■■■■□ 3.08
GTF2A1-201ENST00000298173 SLC24A1O60721 1099 aa34.31■■■■□ 3.08
GTF2A1-201ENST00000298173 STK26Q9P289 416 aa34.31■■■■□ 3.08
GTF2A1-201ENST00000298173 DISP3Q9P2K9 1392 aa34.3■■■■□ 3.08
GTF2A1-201ENST00000298173 TMF1P82094 1093 aa34.3■■■■□ 3.08
GTF2A1-201ENST00000298173 DLC1Q96QB1 1528 aa34.28■■■■□ 3.08
GTF2A1-201ENST00000298173 DIP2AQ14689 1571 aa34.27■■■■□ 3.08
GTF2A1-201ENST00000298173 SLC26A8Q96RN1 970 aa34.27■■■■□ 3.08
GTF2A1-201ENST00000298173 QRICH2Q9H0J4 1663 aa34.27■■■■□ 3.08
GTF2A1-201ENST00000298173 TECPR2O15040 1411 aa34.24■■■■□ 3.07
GTF2A1-201ENST00000298173 KNDC1Q76NI1 1749 aa34.24■■■■□ 3.07
GTF2A1-201ENST00000298173 SIRT1Q96EB6 747 aa34.23■■■■□ 3.07
GTF2A1-201ENST00000298173 PRAM1Q96QH2 718 aa34.19■■■■□ 3.06
GTF2A1-201ENST00000298173 PTPRUQ92729 1446 aa34.18■■■■□ 3.06
GTF2A1-201ENST00000298173 CDCA8Q53HL2 280 aa34.17■■■■□ 3.06
GTF2A1-201ENST00000298173 NPHP4O75161 1426 aaPredicted RBP34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 CPS1P31327 1500 aa34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 LMTK3Q96Q04 1460 aa34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 POLR3GLQ9BT43 218 aa34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 FAM135BQ49AJ0 1406 aa34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 PIK3R4Q99570 1358 aa34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 NCKAP5LQ9HCH0 1330 aa34.16■■■■□ 3.06
GTF2A1-201ENST00000298173 POGKQ9P215 609 aa34.15■■■■□ 3.06
GTF2A1-201ENST00000298173 WAPLQ7Z5K2 1190 aa34.12■■■■□ 3.05
GTF2A1-201ENST00000298173 PLEKHH1Q9ULM0 1364 aa34.11■■■■□ 3.05
GTF2A1-201ENST00000298173 SAFB2Q14151 953 aaKnown RBP eCLIP34.1■■■■□ 3.05
GTF2A1-201ENST00000298173 AMOTL2Q9Y2J4 779 aa34.1■■■■□ 3.05
GTF2A1-201ENST00000298173 PUS7Q96PZ0 661 aaKnown RBP34.09■■■■□ 3.05
GTF2A1-201ENST00000298173 ROBO2Q9HCK4 1378 aa34.08■■■■□ 3.05
GTF2A1-201ENST00000298173 TULP4Q9NRJ4 1543 aa34.07■■■■□ 3.05
GTF2A1-201ENST00000298173 CHD2O14647 1828 aaKnown RBP34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms