RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF11B-201ENST00000297350 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
TNFRSF11B-201ENST00000297350 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF11B-201ENST00000297350 MYOM2P54296 1465 aa13.43□□□□□ -0.26
TNFRSF11B-201ENST00000297350 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
TNFRSF11B-201ENST00000297350 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
TNFRSF11B-201ENST00000297350 DISP3Q9P2K9 1392 aa13.43□□□□□ -0.26
TNFRSF11B-201ENST00000297350 NBPF1Q3BBV0 1214 aa13.42□□□□□ -0.26
TNFRSF11B-201ENST00000297350 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
TNFRSF11B-201ENST00000297350 FRMPD1Q5SYB0 1578 aa13.41□□□□□ -0.26
TNFRSF11B-201ENST00000297350 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
TNFRSF11B-201ENST00000297350 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
TNFRSF11B-201ENST00000297350 EFCAB6Q5THR3 1501 aa13.4□□□□□ -0.26
TNFRSF11B-201ENST00000297350 KIF1BO60333 1816 aa13.4□□□□□ -0.26
TNFRSF11B-201ENST00000297350 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
TNFRSF11B-201ENST00000297350 PPRC1Q5VV67 1664 aaKnown RBP13.39□□□□□ -0.27
TNFRSF11B-201ENST00000297350 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
TNFRSF11B-201ENST00000297350 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
TNFRSF11B-201ENST00000297350 MYO3AQ8NEV4 1616 aa13.36□□□□□ -0.27
TNFRSF11B-201ENST00000297350 ZC3H13Q5T200 1668 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11B-201ENST00000297350 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
TNFRSF11B-201ENST00000297350 PANK3Q9H999 370 aa13.35□□□□□ -0.27
TNFRSF11B-201ENST00000297350 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
TNFRSF11B-201ENST00000297350 MYOM1P52179 1685 aa13.35□□□□□ -0.27
TNFRSF11B-201ENST00000297350 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
TNFRSF11B-201ENST00000297350 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
TNFRSF11B-201ENST00000297350 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
TNFRSF11B-201ENST00000297350 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
TNFRSF11B-201ENST00000297350 SBNO2Q9Y2G9 1366 aa13.33□□□□□ -0.27
TNFRSF11B-201ENST00000297350 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
TNFRSF11B-201ENST00000297350 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
TNFRSF11B-201ENST00000297350 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
TNFRSF11B-201ENST00000297350 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
TNFRSF11B-201ENST00000297350 ADGRB3O60242 1522 aa13.31□□□□□ -0.28
TNFRSF11B-201ENST00000297350 KIF13AQ9H1H9 1805 aa13.31□□□□□ -0.28
TNFRSF11B-201ENST00000297350 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF11B-201ENST00000297350 CAMSAP1Q5T5Y3 1602 aa13.3□□□□□ -0.28
TNFRSF11B-201ENST00000297350 CYB5RLQ6IPT4 315 aa13.3□□□□□ -0.28
TNFRSF11B-201ENST00000297350 ABCC3O15438 1527 aa13.29□□□□□ -0.28
TNFRSF11B-201ENST00000297350 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF11B-201ENST00000297350 KIF3BO15066 747 aa13.29□□□□□ -0.28
TNFRSF11B-201ENST00000297350 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
TNFRSF11B-201ENST00000297350 CC2D1BQ5T0F9 858 aaKnown RBP13.28□□□□□ -0.28
TNFRSF11B-201ENST00000297350 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF11B-201ENST00000297350 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
TNFRSF11B-201ENST00000297350 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
TNFRSF11B-201ENST00000297350 PPLO60437 1756 aa13.27□□□□□ -0.29
TNFRSF11B-201ENST00000297350 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
TNFRSF11B-201ENST00000297350 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
TNFRSF11B-201ENST00000297350 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
TNFRSF11B-201ENST00000297350 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
TNFRSF11B-201ENST00000297350 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNFRSF11B-201ENST00000297350 PIK3C2BO00750 1634 aa13.25□□□□□ -0.29
TNFRSF11B-201ENST00000297350 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
TNFRSF11B-201ENST00000297350 AGLP35573 1532 aa13.24□□□□□ -0.29
TNFRSF11B-201ENST00000297350 TSPOAP1O95153 1857 aa13.24□□□□□ -0.29
TNFRSF11B-201ENST00000297350 MSH5O43196 834 aa13.23□□□□□ -0.29
TNFRSF11B-201ENST00000297350 ARHGAP31Q2M1Z3 1444 aa13.23□□□□□ -0.29
TNFRSF11B-201ENST00000297350 TCERG1O14776 1098 aaKnown RBP13.23□□□□□ -0.29
TNFRSF11B-201ENST00000297350 UGGT1Q9NYU2 1555 aa13.22□□□□□ -0.29
TNFRSF11B-201ENST00000297350 ARHGEF40Q8TER5 1519 aa13.22□□□□□ -0.29
TNFRSF11B-201ENST00000297350 MS4A1P11836 297 aa13.22□□□□□ -0.29
TNFRSF11B-201ENST00000297350 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
TNFRSF11B-201ENST00000297350 NPATQ14207 1427 aa13.21□□□□□ -0.29
TNFRSF11B-201ENST00000297350 PUS7Q96PZ0 661 aaKnown RBP13.21□□□□□ -0.3
TNFRSF11B-201ENST00000297350 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
TNFRSF11B-201ENST00000297350 NOS1P29475 1434 aa13.2□□□□□ -0.3
TNFRSF11B-201ENST00000297350 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
TNFRSF11B-201ENST00000297350 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
TNFRSF11B-201ENST00000297350 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11B-201ENST00000297350 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
TNFRSF11B-201ENST00000297350 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
TNFRSF11B-201ENST00000297350 ADGRB1O14514 1584 aa13.19□□□□□ -0.3
TNFRSF11B-201ENST00000297350 RAPGEF3O95398 923 aa13.18□□□□□ -0.3
TNFRSF11B-201ENST00000297350 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF11B-201ENST00000297350 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
TNFRSF11B-201ENST00000297350 ADGRF5Q8IZF2 1346 aa13.17□□□□□ -0.3
TNFRSF11B-201ENST00000297350 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
TNFRSF11B-201ENST00000297350 CENPJQ9HC77 1338 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF11B-201ENST00000297350 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF11B-201ENST00000297350 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
TNFRSF11B-201ENST00000297350 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
TNFRSF11B-201ENST00000297350 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
TNFRSF11B-201ENST00000297350 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
TNFRSF11B-201ENST00000297350 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
TNFRSF11B-201ENST00000297350 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
TNFRSF11B-201ENST00000297350 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
TNFRSF11B-201ENST00000297350 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
TNFRSF11B-201ENST00000297350 NSD2O96028 1365 aa13.14□□□□□ -0.31
TNFRSF11B-201ENST00000297350 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11B-201ENST00000297350 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
TNFRSF11B-201ENST00000297350 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11B-201ENST00000297350 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11B-201ENST00000297350 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
TNFRSF11B-201ENST00000297350 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF11B-201ENST00000297350 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
TNFRSF11B-201ENST00000297350 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
TNFRSF11B-201ENST00000297350 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
TNFRSF11B-201ENST00000297350 E9PSI1 815 aa13.11□□□□□ -0.31
TNFRSF11B-201ENST00000297350 PPP6R1Q9UPN7 881 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms