RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PANK3Q9H999 370 aa12.53□□□□□ -0.4
PRDM9-201ENST00000296682 MLECQ14165 292 aa12.52□□□□□ -0.4
PRDM9-201ENST00000296682 ADGRB3O60242 1522 aa12.52□□□□□ -0.4
PRDM9-201ENST00000296682 FANCAO15360 1455 aa12.51□□□□□ -0.41
PRDM9-201ENST00000296682 REREQ9P2R6 1566 aa12.5□□□□□ -0.41
PRDM9-201ENST00000296682 ABCA6Q8N139 1617 aa12.5□□□□□ -0.41
PRDM9-201ENST00000296682 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
PRDM9-201ENST00000296682 TMF1P82094 1093 aa12.5□□□□□ -0.41
PRDM9-201ENST00000296682 ERICH6BQ5W0A0 696 aa12.5□□□□□ -0.41
PRDM9-201ENST00000296682 RAPGEF3O95398 923 aa12.5□□□□□ -0.41
PRDM9-201ENST00000296682 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
PRDM9-201ENST00000296682 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
PRDM9-201ENST00000296682 SIGLEC1Q9BZZ2 1709 aa12.48□□□□□ -0.41
PRDM9-201ENST00000296682 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
PRDM9-201ENST00000296682 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
PRDM9-201ENST00000296682 WASHC2CQ9Y4E1 1318 aa12.48□□□□□ -0.41
PRDM9-201ENST00000296682 STK26Q9P289 416 aa12.48□□□□□ -0.41
PRDM9-201ENST00000296682 PARD3Q8TEW0 1356 aa12.48□□□□□ -0.41
PRDM9-201ENST00000296682 CAMSAP1Q5T5Y3 1602 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 CCDC136Q96JN2 1154 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 TRAK1Q9UPV9 953 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 ASXL2Q76L83 1435 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 NEO1Q92859 1461 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
PRDM9-201ENST00000296682 NEUROD2Q15784 382 aa12.46□□□□□ -0.41
PRDM9-201ENST00000296682 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.42
PRDM9-201ENST00000296682 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
PRDM9-201ENST00000296682 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
PRDM9-201ENST00000296682 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
PRDM9-201ENST00000296682 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRDM9-201ENST00000296682 KANK1Q14678 1352 aa12.44□□□□□ -0.42
PRDM9-201ENST00000296682 ADGRL1O94910 1474 aa12.44□□□□□ -0.42
PRDM9-201ENST00000296682 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
PRDM9-201ENST00000296682 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
PRDM9-201ENST00000296682 TESK2Q96S53 571 aa12.43□□□□□ -0.42
PRDM9-201ENST00000296682 NPC1L1Q9UHC9 1359 aa12.42□□□□□ -0.42
PRDM9-201ENST00000296682 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
PRDM9-201ENST00000296682 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
PRDM9-201ENST00000296682 PER1O15534 1290 aaPredicted RBP12.42□□□□□ -0.42
PRDM9-201ENST00000296682 ADGRB1O14514 1584 aa12.41□□□□□ -0.42
PRDM9-201ENST00000296682 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
PRDM9-201ENST00000296682 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
PRDM9-201ENST00000296682 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
PRDM9-201ENST00000296682 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
PRDM9-201ENST00000296682 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
PRDM9-201ENST00000296682 PLIN1O60240 522 aa12.4□□□□□ -0.42
PRDM9-201ENST00000296682 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
PRDM9-201ENST00000296682 ABCC3O15438 1527 aa12.4□□□□□ -0.42
PRDM9-201ENST00000296682 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.43
PRDM9-201ENST00000296682 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
PRDM9-201ENST00000296682 CLTCQ00610 1675 aaKnown RBP12.39□□□□□ -0.43
PRDM9-201ENST00000296682 RALBP1Q15311 655 aa12.39□□□□□ -0.43
PRDM9-201ENST00000296682 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
PRDM9-201ENST00000296682 MYBBP1AQ9BQG0 1328 aaKnown RBP12.39□□□□□ -0.43
PRDM9-201ENST00000296682 ARHGEF28Q8N1W1 1705 aaKnown RBP12.38□□□□□ -0.43
PRDM9-201ENST00000296682 NOS1P29475 1434 aa12.37□□□□□ -0.43
PRDM9-201ENST00000296682 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
PRDM9-201ENST00000296682 UGGT1Q9NYU2 1555 aa12.36□□□□□ -0.43
PRDM9-201ENST00000296682 SETD1AO15047 1707 aaKnown RBP12.36□□□□□ -0.43
PRDM9-201ENST00000296682 BCL11AQ9H165 835 aa12.36□□□□□ -0.43
PRDM9-201ENST00000296682 DISP3Q9P2K9 1392 aa12.36□□□□□ -0.43
PRDM9-201ENST00000296682 ADGRF5Q8IZF2 1346 aa12.36□□□□□ -0.43
PRDM9-201ENST00000296682 FAM69CQ0P6D2 419 aa12.35□□□□□ -0.43
PRDM9-201ENST00000296682 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
PRDM9-201ENST00000296682 PREX1Q8TCU6 1659 aa12.35□□□□□ -0.43
PRDM9-201ENST00000296682 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
PRDM9-201ENST00000296682 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
PRDM9-201ENST00000296682 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
PRDM9-201ENST00000296682 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
PRDM9-201ENST00000296682 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
PRDM9-201ENST00000296682 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
PRDM9-201ENST00000296682 SHPRHQ149N8 1683 aa12.34□□□□□ -0.43
PRDM9-201ENST00000296682 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
PRDM9-201ENST00000296682 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
PRDM9-201ENST00000296682 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.44
PRDM9-201ENST00000296682 AGLP35573 1532 aa12.33□□□□□ -0.44
PRDM9-201ENST00000296682 RCAN3Q9UKA8 241 aa12.32□□□□□ -0.44
PRDM9-201ENST00000296682 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
PRDM9-201ENST00000296682 DIP2BQ9P265 1576 aa12.32□□□□□ -0.44
PRDM9-201ENST00000296682 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
PRDM9-201ENST00000296682 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
PRDM9-201ENST00000296682 POGKQ9P215 609 aa12.31□□□□□ -0.44
PRDM9-201ENST00000296682 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
PRDM9-201ENST00000296682 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
PRDM9-201ENST00000296682 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
PRDM9-201ENST00000296682 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
PRDM9-201ENST00000296682 MYO5BQ9ULV0 1848 aa12.3□□□□□ -0.44
PRDM9-201ENST00000296682 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
PRDM9-201ENST00000296682 NPATQ14207 1427 aa12.29□□□□□ -0.44
PRDM9-201ENST00000296682 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
PRDM9-201ENST00000296682 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
PRDM9-201ENST00000296682 APAF1O14727 1248 aa12.28□□□□□ -0.44
PRDM9-201ENST00000296682 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
PRDM9-201ENST00000296682 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
PRDM9-201ENST00000296682 SKAP1Q86WV1 359 aa12.27□□□□□ -0.44
PRDM9-201ENST00000296682 CABP2Q9NPB3 220 aa12.27□□□□□ -0.44
PRDM9-201ENST00000296682 MINK1Q8N4C8 1332 aaPredicted RBP12.27□□□□□ -0.44
PRDM9-201ENST00000296682 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
PRDM9-201ENST00000296682 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms