RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
SLX4-201ENST00000294008 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
SLX4-201ENST00000294008 SYCP1Q15431 976 aa15.16■□□□□ 0.02
SLX4-201ENST00000294008 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
SLX4-201ENST00000294008 STK11IPQ8N1F8 1099 aa15.15■□□□□ 0.02
SLX4-201ENST00000294008 NEXNQ0ZGT2 675 aa15.14■□□□□ 0.01
SLX4-201ENST00000294008 PDCL3Q9H2J4 239 aa15.14■□□□□ 0.01
SLX4-201ENST00000294008 ZRSR2Q15696 482 aaKnown RBP15.14■□□□□ 0.01
SLX4-201ENST00000294008 HOOK1Q9UJC3 728 aaKnown RBP15.14■□□□□ 0.01
SLX4-201ENST00000294008 TEFQ10587 303 aa15.14■□□□□ 0.01
SLX4-201ENST00000294008 RRP7AQ9Y3A4 280 aaKnown RBP15.14■□□□□ 0.01
SLX4-201ENST00000294008 SEPT7Q16181 437 aaKnown RBP15.13■□□□□ 0.01
SLX4-201ENST00000294008 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
SLX4-201ENST00000294008 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
SLX4-201ENST00000294008 RBM5P52756 815 aaKnown RBP eCLIP15.13■□□□□ 0.01
SLX4-201ENST00000294008 TTC16Q8NEE8 873 aa15.13■□□□□ 0.01
SLX4-201ENST00000294008 ENOX2Q16206 610 aaKnown RBP15.12■□□□□ 0.01
SLX4-201ENST00000294008 KRT18P05783 430 aaKnown RBP15.12■□□□□ 0.01
SLX4-201ENST00000294008 LRRFIP1Q32MZ4 808 aaKnown RBP15.12■□□□□ 0.01
SLX4-201ENST00000294008 TEX35Q5T0J7 233 aa15.12■□□□□ 0.01
SLX4-201ENST00000294008 ANKRD45Q5TZF3 282 aa15.11■□□□□ 0.01
SLX4-201ENST00000294008 CA8P35219 290 aa15.11■□□□□ 0.01
SLX4-201ENST00000294008 ZHX3Q9H4I2 956 aa15.11■□□□□ 0.01
SLX4-201ENST00000294008 LMOD3Q0VAK6 560 aa15.11■□□□□ 0.01
SLX4-201ENST00000294008 H0YHG0 523 aa15.11■□□□□ 0.01
SLX4-201ENST00000294008 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
SLX4-201ENST00000294008 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
SLX4-201ENST00000294008 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
SLX4-201ENST00000294008 CDK5RAP3Q96JB5 506 aa15.1■□□□□ 0.01
SLX4-201ENST00000294008 ATP2B1P20020 1258 aa15.1■□□□□ 0.01
SLX4-201ENST00000294008 BRPF1P55201 1214 aaPredicted RBP15.09■□□□□ 0.01
SLX4-201ENST00000294008 HSP90AB3PQ58FF7 597 aa15.09■□□□□ 0.01
SLX4-201ENST00000294008 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
SLX4-201ENST00000294008 FOXD1Q16676 465 aa15.09■□□□□ 0.01
SLX4-201ENST00000294008 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
SLX4-201ENST00000294008 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0.01
SLX4-201ENST00000294008 SAFBQ15424 915 aaKnown RBP eCLIP15.08■□□□□ 0
SLX4-201ENST00000294008 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
SLX4-201ENST00000294008 BCL2L13Q9BXK5 485 aa15.08■□□□□ 0
SLX4-201ENST00000294008 DDX49Q9Y6V7 483 aaKnown RBP15.08■□□□□ 0
SLX4-201ENST00000294008 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
SLX4-201ENST00000294008 DCTN1Q14203 1278 aa15.08■□□□□ 0
SLX4-201ENST00000294008 ZNF428Q96B54 188 aa15.08■□□□□ 0
SLX4-201ENST00000294008 VPS37CA5D8V6 355 aaPredicted RBP15.07■□□□□ 0
SLX4-201ENST00000294008 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
SLX4-201ENST00000294008 NUTM2BA6NNL0 878 aaPredicted RBP15.06■□□□□ 0
SLX4-201ENST00000294008 NUTM2EB1AL46 878 aaPredicted RBP15.06■□□□□ 0
SLX4-201ENST00000294008 NUTM2AQ8IVF1 878 aaPredicted RBP15.06■□□□□ 0
SLX4-201ENST00000294008 WDR78Q5VTH9 848 aa15.06■□□□□ 0
SLX4-201ENST00000294008 PSME1Q06323 249 aa15.06■□□□□ 0
SLX4-201ENST00000294008 BRMS1Q9HCU9 246 aa15.06■□□□□ 0
SLX4-201ENST00000294008 SEPT11Q9NVA2 429 aaKnown RBP15.05■□□□□ 0
SLX4-201ENST00000294008 RCAN3Q9UKA8 241 aa15.05■□□□□ 0
SLX4-201ENST00000294008 MNS1Q8NEH6 495 aa15.05■□□□□ 0
SLX4-201ENST00000294008 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ 0
SLX4-201ENST00000294008 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
SLX4-201ENST00000294008 TAX1BP1Q86VP1 789 aa15.04■□□□□ -0
SLX4-201ENST00000294008 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
SLX4-201ENST00000294008 TSPYL1Q9H0U9 437 aa15.04■□□□□ -0
SLX4-201ENST00000294008 MYO6Q9UM54 1294 aa15.04■□□□□ -0
SLX4-201ENST00000294008 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
SLX4-201ENST00000294008 ROCK2O75116 1388 aaKnown RBP15.03■□□□□ -0
SLX4-201ENST00000294008 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
SLX4-201ENST00000294008 SSR1P43307 286 aaKnown RBP15.02■□□□□ -0
SLX4-201ENST00000294008 SASS6Q6UVJ0 657 aa15.02■□□□□ -0
SLX4-201ENST00000294008 ZKSCAN1P17029 563 aaPredicted RBP15.02■□□□□ -0
SLX4-201ENST00000294008 GRM1Q13255 1194 aa15.02■□□□□ -0
SLX4-201ENST00000294008 HSP90B2PQ58FF3 399 aa15.02□□□□□ -0.01
SLX4-201ENST00000294008 ANKRD18AQ8IVF6 992 aa15.02□□□□□ -0.01
SLX4-201ENST00000294008 SCLT1Q96NL6 688 aa15.02□□□□□ -0.01
SLX4-201ENST00000294008 G3BP1Q13283 466 aaKnown RBP eCLIP15.02□□□□□ -0.01
SLX4-201ENST00000294008 RALYLQ86SE5 291 aaKnown RBP15.02□□□□□ -0.01
SLX4-201ENST00000294008 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
SLX4-201ENST00000294008 PODXL2Q9NZ53 605 aa15.01□□□□□ -0.01
SLX4-201ENST00000294008 CBX1P83916 185 aa15.01□□□□□ -0.01
SLX4-201ENST00000294008 OLFM4Q6UX06 510 aa15.01□□□□□ -0.01
SLX4-201ENST00000294008 RUFY2Q8WXA3 655 aa15□□□□□ -0.01
SLX4-201ENST00000294008 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
SLX4-201ENST00000294008 SCRIBQ14160 1630 aa15□□□□□ -0.01
SLX4-201ENST00000294008 NUTM2GQ5VZR2 741 aa15□□□□□ -0.01
SLX4-201ENST00000294008 CENPHQ9H3R5 247 aa15□□□□□ -0.01
SLX4-201ENST00000294008 ACBD3Q9H3P7 528 aa15□□□□□ -0.01
SLX4-201ENST00000294008 NOM1Q5C9Z4 860 aaKnown RBP14.99□□□□□ -0.01
SLX4-201ENST00000294008 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
SLX4-201ENST00000294008 ZSCAN29Q8IWY8 852 aaPredicted RBP14.99□□□□□ -0.01
SLX4-201ENST00000294008 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
SLX4-201ENST00000294008 RIC3Q7Z5B4 369 aa14.99□□□□□ -0.01
SLX4-201ENST00000294008 TTLL12Q14166 644 aaPredicted RBP14.98□□□□□ -0.01
SLX4-201ENST00000294008 MAGEC2Q9UBF1 373 aaPredicted RBP14.98□□□□□ -0.01
SLX4-201ENST00000294008 AXDND1Q5T1B0 1012 aaPredicted RBP14.98□□□□□ -0.01
SLX4-201ENST00000294008 TANGO6Q9C0B7 1094 aa14.98□□□□□ -0.01
SLX4-201ENST00000294008 BCCIPQ9P287 314 aaKnown RBP eCLIP14.98□□□□□ -0.01
SLX4-201ENST00000294008 FAM13BQ9NYF5 915 aa14.98□□□□□ -0.01
SLX4-201ENST00000294008 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
SLX4-201ENST00000294008 COG3Q96JB2 828 aa14.97□□□□□ -0.01
SLX4-201ENST00000294008 GRIPAP1Q4V328 841 aa14.97□□□□□ -0.01
SLX4-201ENST00000294008 COMMD10Q9Y6G5 202 aa14.97□□□□□ -0.01
SLX4-201ENST00000294008 CLASRPQ8N2M8 674 aaKnown RBP14.97□□□□□ -0.01
SLX4-201ENST00000294008 CLIP1P30622 1438 aa14.97□□□□□ -0.01
SLX4-201ENST00000294008 KIF3BO15066 747 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms