RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
TRAPPC10-201ENST00000291574 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
TRAPPC10-201ENST00000291574 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
TRAPPC10-201ENST00000291574 MRE11P49959 708 aa16.67■□□□□ 0.26
TRAPPC10-201ENST00000291574 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
TRAPPC10-201ENST00000291574 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
TRAPPC10-201ENST00000291574 TRAK2O60296 914 aa16.66■□□□□ 0.26
TRAPPC10-201ENST00000291574 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
TRAPPC10-201ENST00000291574 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC10-201ENST00000291574 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC10-201ENST00000291574 NUCB2P80303 420 aa16.65■□□□□ 0.26
TRAPPC10-201ENST00000291574 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC10-201ENST00000291574 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC10-201ENST00000291574 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC10-201ENST00000291574 AKNAQ7Z591 1439 aa16.64■□□□□ 0.25
TRAPPC10-201ENST00000291574 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
TRAPPC10-201ENST00000291574 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
TRAPPC10-201ENST00000291574 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC10-201ENST00000291574 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
TRAPPC10-201ENST00000291574 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
TRAPPC10-201ENST00000291574 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC10-201ENST00000291574 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
TRAPPC10-201ENST00000291574 API5Q9BZZ5 524 aaKnown RBP16.62■□□□□ 0.25
TRAPPC10-201ENST00000291574 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
TRAPPC10-201ENST00000291574 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
TRAPPC10-201ENST00000291574 COG3Q96JB2 828 aa16.61■□□□□ 0.25
TRAPPC10-201ENST00000291574 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC10-201ENST00000291574 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
TRAPPC10-201ENST00000291574 BACH2Q9BYV9 841 aa16.61■□□□□ 0.25
TRAPPC10-201ENST00000291574 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
TRAPPC10-201ENST00000291574 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
TRAPPC10-201ENST00000291574 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
TRAPPC10-201ENST00000291574 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
TRAPPC10-201ENST00000291574 UACAQ9BZF9 1416 aa16.59■□□□□ 0.25
TRAPPC10-201ENST00000291574 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
TRAPPC10-201ENST00000291574 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
TRAPPC10-201ENST00000291574 IFT57Q9NWB7 429 aa16.59■□□□□ 0.25
TRAPPC10-201ENST00000291574 SMC3Q9UQE7 1217 aa16.59■□□□□ 0.25
TRAPPC10-201ENST00000291574 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC10-201ENST00000291574 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC10-201ENST00000291574 BRD4O60885 1362 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC10-201ENST00000291574 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
TRAPPC10-201ENST00000291574 HMOX1P09601 288 aa16.57■□□□□ 0.24
TRAPPC10-201ENST00000291574 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
TRAPPC10-201ENST00000291574 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
TRAPPC10-201ENST00000291574 TSR1Q2NL82 804 aaKnown RBP16.56■□□□□ 0.24
TRAPPC10-201ENST00000291574 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC10-201ENST00000291574 TEFQ10587 303 aa16.56■□□□□ 0.24
TRAPPC10-201ENST00000291574 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
TRAPPC10-201ENST00000291574 FOSBP53539 338 aa16.55■□□□□ 0.24
TRAPPC10-201ENST00000291574 GPS2Q13227 327 aa16.55■□□□□ 0.24
TRAPPC10-201ENST00000291574 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
TRAPPC10-201ENST00000291574 RBM10P98175 930 aaKnown RBP16.55■□□□□ 0.24
TRAPPC10-201ENST00000291574 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
TRAPPC10-201ENST00000291574 CDC45O75419 566 aa16.54■□□□□ 0.24
TRAPPC10-201ENST00000291574 BCAR3O75815 825 aa16.54■□□□□ 0.24
TRAPPC10-201ENST00000291574 SASS6Q6UVJ0 657 aa16.54■□□□□ 0.24
TRAPPC10-201ENST00000291574 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
TRAPPC10-201ENST00000291574 MSH5O43196 834 aa16.53■□□□□ 0.24
TRAPPC10-201ENST00000291574 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAPPC10-201ENST00000291574 TPM1P09493 284 aa16.53■□□□□ 0.24
TRAPPC10-201ENST00000291574 CPLX1O14810 134 aa16.53■□□□□ 0.24
TRAPPC10-201ENST00000291574 PRPF40AO75400 957 aaKnown RBP16.53■□□□□ 0.24
TRAPPC10-201ENST00000291574 CPLX2Q6PUV4 134 aaKnown RBP16.52■□□□□ 0.24
TRAPPC10-201ENST00000291574 MTHFSP49914 203 aa16.52■□□□□ 0.23
TRAPPC10-201ENST00000291574 MARCH6O60337 910 aa16.52■□□□□ 0.23
TRAPPC10-201ENST00000291574 CCDC39Q9UFE4 941 aa16.52■□□□□ 0.23
TRAPPC10-201ENST00000291574 MPNDQ8N594 471 aa16.51■□□□□ 0.23
TRAPPC10-201ENST00000291574 AKAP17AQ02040 695 aaKnown RBP16.51■□□□□ 0.23
TRAPPC10-201ENST00000291574 GNAI1P63096 354 aa16.51■□□□□ 0.23
TRAPPC10-201ENST00000291574 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
TRAPPC10-201ENST00000291574 AAMPQ13685 434 aa16.51■□□□□ 0.23
TRAPPC10-201ENST00000291574 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 NEK4P51957 841 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 TEX35Q5T0J7 233 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 KIF21BO75037 1637 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
TRAPPC10-201ENST00000291574 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
TRAPPC10-201ENST00000291574 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
TRAPPC10-201ENST00000291574 NBPF8Q3BBV2 869 aa16.49■□□□□ 0.23
TRAPPC10-201ENST00000291574 C1orf115Q9H7X2 142 aa16.49■□□□□ 0.23
TRAPPC10-201ENST00000291574 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 ROCK1Q13464 1354 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 IGF1RP08069 1367 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 APPP05067 770 aa16.48■□□□□ 0.23
TRAPPC10-201ENST00000291574 SETQ01105 290 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC10-201ENST00000291574 TRIM29Q14134 588 aa16.47■□□□□ 0.23
TRAPPC10-201ENST00000291574 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC10-201ENST00000291574 MAP7D2Q96T17 732 aa16.47■□□□□ 0.23
TRAPPC10-201ENST00000291574 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
TRAPPC10-201ENST00000291574 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms