RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 IQGAP3Q86VI3 1631 aa14.88□□□□□ -0.03
CCDC58-201ENST00000291458 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
CCDC58-201ENST00000291458 E9PCH4 1651 aa14.87□□□□□ -0.03
CCDC58-201ENST00000291458 NPHP4O75161 1426 aaPredicted RBP14.87□□□□□ -0.03
CCDC58-201ENST00000291458 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
CCDC58-201ENST00000291458 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
CCDC58-201ENST00000291458 ADGRB3O60242 1522 aa14.85□□□□□ -0.03
CCDC58-201ENST00000291458 SCAF11Q99590 1463 aaKnown RBP14.83□□□□□ -0.03
CCDC58-201ENST00000291458 NUP155O75694 1391 aa14.83□□□□□ -0.04
CCDC58-201ENST00000291458 NOS1P29475 1434 aa14.83□□□□□ -0.04
CCDC58-201ENST00000291458 RPRD2Q5VT52 1461 aaKnown RBP14.81□□□□□ -0.04
CCDC58-201ENST00000291458 SLIT1O75093 1534 aa14.81□□□□□ -0.04
CCDC58-201ENST00000291458 STRCP1A6NGW2 1772 aa14.8□□□□□ -0.04
CCDC58-201ENST00000291458 IDI1Q13907 227 aa14.8□□□□□ -0.04
CCDC58-201ENST00000291458 ARHGAP23Q9P227 1491 aa14.8□□□□□ -0.04
CCDC58-201ENST00000291458 MED14O60244 1454 aa14.79□□□□□ -0.04
CCDC58-201ENST00000291458 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
CCDC58-201ENST00000291458 KDM5AP29375 1690 aaKnown RBP14.79□□□□□ -0.04
CCDC58-201ENST00000291458 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
CCDC58-201ENST00000291458 SPHKAPQ2M3C7 1700 aa14.78□□□□□ -0.04
CCDC58-201ENST00000291458 NAIPQ13075 1403 aa14.78□□□□□ -0.04
CCDC58-201ENST00000291458 LTKP29376 864 aa14.78□□□□□ -0.04
CCDC58-201ENST00000291458 TMEM2Q9UHN6 1383 aa14.77□□□□□ -0.04
CCDC58-201ENST00000291458 EID1Q9Y6B2 187 aa14.77□□□□□ -0.05
CCDC58-201ENST00000291458 CPS1P31327 1500 aa14.76□□□□□ -0.05
CCDC58-201ENST00000291458 TMEM131LA2VDJ0 1609 aa14.76□□□□□ -0.05
CCDC58-201ENST00000291458 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
CCDC58-201ENST00000291458 UBAP1LF5GYI3 381 aa14.75□□□□□ -0.05
CCDC58-201ENST00000291458 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
CCDC58-201ENST00000291458 BCANQ96GW7 911 aa14.75□□□□□ -0.05
CCDC58-201ENST00000291458 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
CCDC58-201ENST00000291458 HFM1A2PYH4 1435 aa14.74□□□□□ -0.05
CCDC58-201ENST00000291458 PPP1R15AO75807 674 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-201ENST00000291458 NUTM2DQ5VT03 806 aaPredicted RBP14.73□□□□□ -0.05
CCDC58-201ENST00000291458 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
CCDC58-201ENST00000291458 RIMS2Q9UQ26 1411 aa14.72□□□□□ -0.05
CCDC58-201ENST00000291458 CLTCL1P53675 1640 aa14.71□□□□□ -0.05
CCDC58-201ENST00000291458 SLC26A8Q96RN1 970 aa14.7□□□□□ -0.06
CCDC58-201ENST00000291458 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
CCDC58-201ENST00000291458 PIP4K2BP78356 416 aa14.69□□□□□ -0.06
CCDC58-201ENST00000291458 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
CCDC58-201ENST00000291458 XIRP1Q702N8 1843 aaKnown RBP14.69□□□□□ -0.06
CCDC58-201ENST00000291458 KIF1BO60333 1816 aa14.67□□□□□ -0.06
CCDC58-201ENST00000291458 TRPM2O94759 1503 aa14.66□□□□□ -0.06
CCDC58-201ENST00000291458 ZNF326Q5BKZ1 582 aaKnown RBP14.65□□□□□ -0.06
CCDC58-201ENST00000291458 RBM33Q96EV2 1170 aaKnown RBP14.64□□□□□ -0.07
CCDC58-201ENST00000291458 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
CCDC58-201ENST00000291458 PLEKHG1Q9ULL1 1385 aa14.63□□□□□ -0.07
CCDC58-201ENST00000291458 NWD1Q149M9 1564 aa14.63□□□□□ -0.07
CCDC58-201ENST00000291458 CHD2O14647 1828 aaKnown RBP14.6□□□□□ -0.07
CCDC58-201ENST00000291458 TOM1O60784 492 aa14.6□□□□□ -0.07
CCDC58-201ENST00000291458 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC58-201ENST00000291458 TMEM94Q12767 1356 aa14.6□□□□□ -0.07
CCDC58-201ENST00000291458 NRXN3Q9Y4C0 1643 aa14.59□□□□□ -0.07
CCDC58-201ENST00000291458 HDGFP51858 240 aaKnown RBP14.59□□□□□ -0.07
CCDC58-201ENST00000291458 NEXMIFQ5QGS0 1516 aa14.59□□□□□ -0.07
CCDC58-201ENST00000291458 DIP2AQ14689 1571 aa14.59□□□□□ -0.07
CCDC58-201ENST00000291458 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.07
CCDC58-201ENST00000291458 NKTRP30414 1462 aaKnown RBP14.58□□□□□ -0.08
CCDC58-201ENST00000291458 KCNA6P17658 529 aa14.58□□□□□ -0.08
CCDC58-201ENST00000291458 PROSER2Q86WR7 435 aaPredicted RBP14.58□□□□□ -0.08
CCDC58-201ENST00000291458 SETD5Q9C0A6 1442 aa14.57□□□□□ -0.08
CCDC58-201ENST00000291458 HSPA1LP34931 641 aa14.56□□□□□ -0.08
CCDC58-201ENST00000291458 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
CCDC58-201ENST00000291458 PPLO60437 1756 aa14.55□□□□□ -0.08
CCDC58-201ENST00000291458 RAB3GAP2Q9H2M9 1393 aa14.55□□□□□ -0.08
CCDC58-201ENST00000291458 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
CCDC58-201ENST00000291458 SETBP1Q9Y6X0 1596 aa14.55□□□□□ -0.08
CCDC58-201ENST00000291458 C14orf37Q86TY3 774 aa14.54□□□□□ -0.08
CCDC58-201ENST00000291458 CCDC144AA2RUR9 1427 aa14.53□□□□□ -0.08
CCDC58-201ENST00000291458 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
CCDC58-201ENST00000291458 PTPRUQ92729 1446 aa14.52□□□□□ -0.08
CCDC58-201ENST00000291458 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.09
CCDC58-201ENST00000291458 ROBO1Q9Y6N7 1651 aa14.52□□□□□ -0.09
CCDC58-201ENST00000291458 MSH6P52701 1360 aa14.51□□□□□ -0.09
CCDC58-201ENST00000291458 TBX22Q9Y458 520 aa14.51□□□□□ -0.09
CCDC58-201ENST00000291458 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
CCDC58-201ENST00000291458 METP08581 1390 aa14.49□□□□□ -0.09
CCDC58-201ENST00000291458 RGL3Q3MIN7 710 aa14.49□□□□□ -0.09
CCDC58-201ENST00000291458 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
CCDC58-201ENST00000291458 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
CCDC58-201ENST00000291458 IFT172Q9UG01 1749 aa14.48□□□□□ -0.09
CCDC58-201ENST00000291458 MED1Q15648 1581 aaPredicted RBP14.47□□□□□ -0.09
CCDC58-201ENST00000291458 PIK3R4Q99570 1358 aa14.46□□□□□ -0.1
CCDC58-201ENST00000291458 PHLPP1O60346 1717 aa14.45□□□□□ -0.1
CCDC58-201ENST00000291458 NALCNQ8IZF0 1738 aa14.45□□□□□ -0.1
CCDC58-201ENST00000291458 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
CCDC58-201ENST00000291458 VGFO15240 615 aaPredicted RBP14.42□□□□□ -0.1
CCDC58-201ENST00000291458 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
CCDC58-201ENST00000291458 ATF3P18847 181 aa14.41□□□□□ -0.1
CCDC58-201ENST00000291458 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
CCDC58-201ENST00000291458 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
CCDC58-201ENST00000291458 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
CCDC58-201ENST00000291458 ASXL1Q8IXJ9 1541 aa14.39□□□□□ -0.11
CCDC58-201ENST00000291458 ILDR2Q71H61 639 aa14.38□□□□□ -0.11
CCDC58-201ENST00000291458 ADGRL3Q9HAR2 1447 aa14.38□□□□□ -0.11
CCDC58-201ENST00000291458 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
CCDC58-201ENST00000291458 ANKRD30BQ9BXX2 1392 aa14.37□□□□□ -0.11
CCDC58-201ENST00000291458 ROBO2Q9HCK4 1378 aa14.37□□□□□ -0.11
CCDC58-201ENST00000291458 CADPS2Q86UW7 1296 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms