RNA–Protein interactions for RNA: ENST00000290294.4

PRAC1-201, Transcript of PRAC1 small nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAC1, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1-201ENST00000290294 MROH1Q8NDA8 1641 aa12.2□□□□□ -0.46
PRAC1-201ENST00000290294 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
PRAC1-201ENST00000290294 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRAC1-201ENST00000290294 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
PRAC1-201ENST00000290294 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
PRAC1-201ENST00000290294 STRCP1A6NGW2 1772 aa12.18□□□□□ -0.46
PRAC1-201ENST00000290294 EFCAB6Q5THR3 1501 aa12.18□□□□□ -0.46
PRAC1-201ENST00000290294 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
PRAC1-201ENST00000290294 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
PRAC1-201ENST00000290294 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
PRAC1-201ENST00000290294 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
PRAC1-201ENST00000290294 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
PRAC1-201ENST00000290294 ALKQ9UM73 1620 aa12.17□□□□□ -0.46
PRAC1-201ENST00000290294 MSH6P52701 1360 aa12.17□□□□□ -0.46
PRAC1-201ENST00000290294 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
PRAC1-201ENST00000290294 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
PRAC1-201ENST00000290294 TBX22Q9Y458 520 aa12.15□□□□□ -0.46
PRAC1-201ENST00000290294 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
PRAC1-201ENST00000290294 NOS1P29475 1434 aa12.14□□□□□ -0.47
PRAC1-201ENST00000290294 CROCC2H7BZ55 1655 aa12.14□□□□□ -0.47
PRAC1-201ENST00000290294 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
PRAC1-201ENST00000290294 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
PRAC1-201ENST00000290294 NCOA3Q9Y6Q9 1424 aa12.13□□□□□ -0.47
PRAC1-201ENST00000290294 RGS17Q9UGC6 210 aaPredicted RBP12.13□□□□□ -0.47
PRAC1-201ENST00000290294 TET3O43151 1660 aa12.13□□□□□ -0.47
PRAC1-201ENST00000290294 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
PRAC1-201ENST00000290294 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
PRAC1-201ENST00000290294 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
PRAC1-201ENST00000290294 PLEKHG1Q9ULL1 1385 aa12.11□□□□□ -0.47
PRAC1-201ENST00000290294 HAX1O00165 279 aa12.11□□□□□ -0.47
PRAC1-201ENST00000290294 ATF3P18847 181 aa12.11□□□□□ -0.47
PRAC1-201ENST00000290294 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
PRAC1-201ENST00000290294 ADGRL2O95490 1459 aa12.1□□□□□ -0.47
PRAC1-201ENST00000290294 JCADQ9P266 1359 aa12.1□□□□□ -0.47
PRAC1-201ENST00000290294 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
PRAC1-201ENST00000290294 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
PRAC1-201ENST00000290294 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
PRAC1-201ENST00000290294 ADGRB3O60242 1522 aa12.09□□□□□ -0.47
PRAC1-201ENST00000290294 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
PRAC1-201ENST00000290294 XIRP1Q702N8 1843 aaKnown RBP12.09□□□□□ -0.47
PRAC1-201ENST00000290294 PIK3R4Q99570 1358 aa12.08□□□□□ -0.48
PRAC1-201ENST00000290294 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
PRAC1-201ENST00000290294 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
PRAC1-201ENST00000290294 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
PRAC1-201ENST00000290294 SPATA31A6Q5VVP1 1343 aa12.08□□□□□ -0.48
PRAC1-201ENST00000290294 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
PRAC1-201ENST00000290294 LHX8Q68G74 356 aa12.05□□□□□ -0.48
PRAC1-201ENST00000290294 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
PRAC1-201ENST00000290294 ZFYVE9O95405 1425 aa12.04□□□□□ -0.48
PRAC1-201ENST00000290294 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
PRAC1-201ENST00000290294 ROCK1Q13464 1354 aa12.04□□□□□ -0.48
PRAC1-201ENST00000290294 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
PRAC1-201ENST00000290294 NUP155O75694 1391 aa12.03□□□□□ -0.48
PRAC1-201ENST00000290294 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
PRAC1-201ENST00000290294 ABCB7O75027 752 aa12.01□□□□□ -0.49
PRAC1-201ENST00000290294 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
PRAC1-201ENST00000290294 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
PRAC1-201ENST00000290294 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
PRAC1-201ENST00000290294 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
PRAC1-201ENST00000290294 GCC2Q8IWJ2 1684 aa12□□□□□ -0.49
PRAC1-201ENST00000290294 RXRBP28702 533 aa12□□□□□ -0.49
PRAC1-201ENST00000290294 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
PRAC1-201ENST00000290294 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
PRAC1-201ENST00000290294 TRPM2O94759 1503 aa11.98□□□□□ -0.49
PRAC1-201ENST00000290294 ITGAEP38570 1179 aa11.98□□□□□ -0.49
PRAC1-201ENST00000290294 ADAMTS13Q76LX8 1427 aa11.97□□□□□ -0.49
PRAC1-201ENST00000290294 UNC13BO14795 1591 aa11.96□□□□□ -0.49
PRAC1-201ENST00000290294 DCCP43146 1447 aa11.96□□□□□ -0.49
PRAC1-201ENST00000290294 MYO5BQ9ULV0 1848 aa11.96□□□□□ -0.49
PRAC1-201ENST00000290294 BRINP3Q76B58 766 aa11.96□□□□□ -0.49
PRAC1-201ENST00000290294 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
PRAC1-201ENST00000290294 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
PRAC1-201ENST00000290294 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
PRAC1-201ENST00000290294 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
PRAC1-201ENST00000290294 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.94□□□□□ -0.5
PRAC1-201ENST00000290294 TRIM52Q96A61 297 aa11.94□□□□□ -0.5
PRAC1-201ENST00000290294 E9PCH4 1651 aa11.94□□□□□ -0.5
PRAC1-201ENST00000290294 IQGAP3Q86VI3 1631 aa11.93□□□□□ -0.5
PRAC1-201ENST00000290294 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.5
PRAC1-201ENST00000290294 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
PRAC1-201ENST00000290294 AHDC1Q5TGY3 1603 aaPredicted RBP11.93□□□□□ -0.5
PRAC1-201ENST00000290294 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
PRAC1-201ENST00000290294 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
PRAC1-201ENST00000290294 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
PRAC1-201ENST00000290294 SETD5Q9C0A6 1442 aa11.91□□□□□ -0.5
PRAC1-201ENST00000290294 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
PRAC1-201ENST00000290294 AFF2P51816 1311 aa11.9□□□□□ -0.5
PRAC1-201ENST00000290294 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
PRAC1-201ENST00000290294 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
PRAC1-201ENST00000290294 PTPRUQ92729 1446 aa11.89□□□□□ -0.51
PRAC1-201ENST00000290294 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
PRAC1-201ENST00000290294 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
PRAC1-201ENST00000290294 LRP6O75581 1613 aa11.87□□□□□ -0.51
PRAC1-201ENST00000290294 METP08581 1390 aa11.87□□□□□ -0.51
PRAC1-201ENST00000290294 MST1RQ04912 1400 aa11.86□□□□□ -0.51
PRAC1-201ENST00000290294 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
PRAC1-201ENST00000290294 ADGRL3Q9HAR2 1447 aa11.86□□□□□ -0.51
PRAC1-201ENST00000290294 SPHKAPQ2M3C7 1700 aa11.85□□□□□ -0.51
PRAC1-201ENST00000290294 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
PRAC1-201ENST00000290294 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms