RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
LRTOMT-201ENST00000289488 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
LRTOMT-201ENST00000289488 ADAMTSL3P82987 1691 aa13.6□□□□□ -0.23
LRTOMT-201ENST00000289488 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
LRTOMT-201ENST00000289488 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
LRTOMT-201ENST00000289488 TNRQ92752 1358 aa13.58□□□□□ -0.24
LRTOMT-201ENST00000289488 PPLO60437 1756 aa13.58□□□□□ -0.24
LRTOMT-201ENST00000289488 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
LRTOMT-201ENST00000289488 NEURL4Q96JN8 1562 aa13.57□□□□□ -0.24
LRTOMT-201ENST00000289488 TRPM1Q7Z4N2 1603 aa13.57□□□□□ -0.24
LRTOMT-201ENST00000289488 NEXMIFQ5QGS0 1516 aa13.56□□□□□ -0.24
LRTOMT-201ENST00000289488 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
LRTOMT-201ENST00000289488 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
LRTOMT-201ENST00000289488 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
LRTOMT-201ENST00000289488 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
LRTOMT-201ENST00000289488 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
LRTOMT-201ENST00000289488 CFAP70Q5T0N1 1121 aa13.55□□□□□ -0.24
LRTOMT-201ENST00000289488 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
LRTOMT-201ENST00000289488 MYOM2P54296 1465 aa13.52□□□□□ -0.24
LRTOMT-201ENST00000289488 UBR1Q8IWV7 1749 aa13.52□□□□□ -0.24
LRTOMT-201ENST00000289488 USP47Q96K76 1375 aa13.52□□□□□ -0.25
LRTOMT-201ENST00000289488 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
LRTOMT-201ENST00000289488 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
LRTOMT-201ENST00000289488 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
LRTOMT-201ENST00000289488 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
LRTOMT-201ENST00000289488 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
LRTOMT-201ENST00000289488 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
LRTOMT-201ENST00000289488 PTPRMP28827 1452 aa13.5□□□□□ -0.25
LRTOMT-201ENST00000289488 C11orf95C9JLR9 678 aaPredicted RBP13.49□□□□□ -0.25
LRTOMT-201ENST00000289488 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
LRTOMT-201ENST00000289488 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
LRTOMT-201ENST00000289488 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
LRTOMT-201ENST00000289488 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
LRTOMT-201ENST00000289488 SETD1BQ9UPS6 1966 aaKnown RBP13.48□□□□□ -0.25
LRTOMT-201ENST00000289488 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
LRTOMT-201ENST00000289488 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
LRTOMT-201ENST00000289488 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
LRTOMT-201ENST00000289488 LTKP29376 864 aa13.47□□□□□ -0.25
LRTOMT-201ENST00000289488 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
LRTOMT-201ENST00000289488 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.26
LRTOMT-201ENST00000289488 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
LRTOMT-201ENST00000289488 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
LRTOMT-201ENST00000289488 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
LRTOMT-201ENST00000289488 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
LRTOMT-201ENST00000289488 DDX10Q13206 875 aaKnown RBP13.43□□□□□ -0.26
LRTOMT-201ENST00000289488 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
LRTOMT-201ENST00000289488 ADGRB1O14514 1584 aa13.42□□□□□ -0.26
LRTOMT-201ENST00000289488 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
LRTOMT-201ENST00000289488 BCANQ96GW7 911 aa13.42□□□□□ -0.26
LRTOMT-201ENST00000289488 TRAK1Q9UPV9 953 aa13.42□□□□□ -0.26
LRTOMT-201ENST00000289488 LAMC1P11047 1609 aa13.42□□□□□ -0.26
LRTOMT-201ENST00000289488 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
LRTOMT-201ENST00000289488 THEMISQ8N1K5 641 aaPredicted RBP13.41□□□□□ -0.26
LRTOMT-201ENST00000289488 STK26Q9P289 416 aa13.41□□□□□ -0.26
LRTOMT-201ENST00000289488 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
LRTOMT-201ENST00000289488 ASXL1Q8IXJ9 1541 aa13.41□□□□□ -0.26
LRTOMT-201ENST00000289488 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
LRTOMT-201ENST00000289488 SCAF11Q99590 1463 aaKnown RBP13.4□□□□□ -0.26
LRTOMT-201ENST00000289488 TESK2Q96S53 571 aa13.4□□□□□ -0.26
LRTOMT-201ENST00000289488 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
LRTOMT-201ENST00000289488 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
LRTOMT-201ENST00000289488 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
LRTOMT-201ENST00000289488 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
LRTOMT-201ENST00000289488 SLIT1O75093 1534 aa13.39□□□□□ -0.27
LRTOMT-201ENST00000289488 ZNF142P52746 1687 aaPredicted RBP13.39□□□□□ -0.27
LRTOMT-201ENST00000289488 SETD1AO15047 1707 aaKnown RBP13.38□□□□□ -0.27
LRTOMT-201ENST00000289488 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
LRTOMT-201ENST00000289488 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
LRTOMT-201ENST00000289488 EID1Q9Y6B2 187 aa13.38□□□□□ -0.27
LRTOMT-201ENST00000289488 METP08581 1390 aa13.38□□□□□ -0.27
LRTOMT-201ENST00000289488 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
LRTOMT-201ENST00000289488 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
LRTOMT-201ENST00000289488 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
LRTOMT-201ENST00000289488 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
LRTOMT-201ENST00000289488 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
LRTOMT-201ENST00000289488 HSPA2P54652 639 aa13.35□□□□□ -0.27
LRTOMT-201ENST00000289488 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
LRTOMT-201ENST00000289488 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
LRTOMT-201ENST00000289488 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
LRTOMT-201ENST00000289488 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.28
LRTOMT-201ENST00000289488 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
LRTOMT-201ENST00000289488 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
LRTOMT-201ENST00000289488 ANKLE2Q86XL3 938 aa13.32□□□□□ -0.28
LRTOMT-201ENST00000289488 PRAM1Q96QH2 718 aa13.32□□□□□ -0.28
LRTOMT-201ENST00000289488 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
LRTOMT-201ENST00000289488 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
LRTOMT-201ENST00000289488 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
LRTOMT-201ENST00000289488 TMF1P82094 1093 aa13.3□□□□□ -0.28
LRTOMT-201ENST00000289488 MED14O60244 1454 aa13.3□□□□□ -0.28
LRTOMT-201ENST00000289488 FKBP8Q14318 412 aa13.29□□□□□ -0.28
LRTOMT-201ENST00000289488 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
LRTOMT-201ENST00000289488 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
LRTOMT-201ENST00000289488 CNGB1Q14028 1251 aaPredicted RBP13.28□□□□□ -0.28
LRTOMT-201ENST00000289488 POGKQ9P215 609 aa13.28□□□□□ -0.28
LRTOMT-201ENST00000289488 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
LRTOMT-201ENST00000289488 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
LRTOMT-201ENST00000289488 LMTK3Q96Q04 1460 aa13.27□□□□□ -0.28
LRTOMT-201ENST00000289488 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
LRTOMT-201ENST00000289488 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
LRTOMT-201ENST00000289488 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms