RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 PIK3C2BO00750 1634 aa10.24□□□□□ -0.77
SSX2B-201ENST00000288839 ARHGAP31Q2M1Z3 1444 aa10.23□□□□□ -0.77
SSX2B-201ENST00000288839 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
SSX2B-201ENST00000288839 SETD5Q9C0A6 1442 aa10.22□□□□□ -0.77
SSX2B-201ENST00000288839 IQGAP3Q86VI3 1631 aa10.22□□□□□ -0.77
SSX2B-201ENST00000288839 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
SSX2B-201ENST00000288839 TET3O43151 1660 aa10.21□□□□□ -0.78
SSX2B-201ENST00000288839 STRCP1A6NGW2 1772 aa10.2□□□□□ -0.78
SSX2B-201ENST00000288839 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
SSX2B-201ENST00000288839 NPHP4O75161 1426 aaPredicted RBP10.19□□□□□ -0.78
SSX2B-201ENST00000288839 PKD2Q13563 968 aa10.19□□□□□ -0.78
SSX2B-201ENST00000288839 E9PCH4 1651 aa10.18□□□□□ -0.78
SSX2B-201ENST00000288839 ADGRB3O60242 1522 aa10.18□□□□□ -0.78
SSX2B-201ENST00000288839 NOS1P29475 1434 aa10.18□□□□□ -0.78
SSX2B-201ENST00000288839 RPRD2Q5VT52 1461 aaKnown RBP10.17□□□□□ -0.78
SSX2B-201ENST00000288839 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
SSX2B-201ENST00000288839 ARHGAP23Q9P227 1491 aa10.17□□□□□ -0.78
SSX2B-201ENST00000288839 MYO5BQ9ULV0 1848 aa10.17□□□□□ -0.78
SSX2B-201ENST00000288839 SLIT1O75093 1534 aa10.17□□□□□ -0.78
SSX2B-201ENST00000288839 MED14O60244 1454 aa10.17□□□□□ -0.78
SSX2B-201ENST00000288839 IDI1Q13907 227 aa10.16□□□□□ -0.78
SSX2B-201ENST00000288839 ALKQ9UM73 1620 aa10.15□□□□□ -0.78
SSX2B-201ENST00000288839 LTKP29376 864 aa10.15□□□□□ -0.78
SSX2B-201ENST00000288839 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
SSX2B-201ENST00000288839 MPHOSPH9Q99550 1183 aa10.15□□□□□ -0.78
SSX2B-201ENST00000288839 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
SSX2B-201ENST00000288839 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
SSX2B-201ENST00000288839 ANKLE2Q86XL3 938 aa10.14□□□□□ -0.79
SSX2B-201ENST00000288839 THEMISQ8N1K5 641 aaPredicted RBP10.14□□□□□ -0.79
SSX2B-201ENST00000288839 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
SSX2B-201ENST00000288839 IQSEC2Q5JU85 1478 aa10.14□□□□□ -0.79
SSX2B-201ENST00000288839 CHGAP10645 457 aaKnown RBP10.13□□□□□ -0.79
SSX2B-201ENST00000288839 SLC52A1Q9NWF4 448 aa10.13□□□□□ -0.79
SSX2B-201ENST00000288839 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
SSX2B-201ENST00000288839 CPS1P31327 1500 aa10.12□□□□□ -0.79
SSX2B-201ENST00000288839 KDM5AP29375 1690 aaKnown RBP10.12□□□□□ -0.79
SSX2B-201ENST00000288839 TMEM131LA2VDJ0 1609 aa10.11□□□□□ -0.79
SSX2B-201ENST00000288839 SPHKAPQ2M3C7 1700 aa10.11□□□□□ -0.79
SSX2B-201ENST00000288839 LRRC7Q96NW7 1537 aa10.11□□□□□ -0.79
SSX2B-201ENST00000288839 XIRP1Q702N8 1843 aaKnown RBP10.1□□□□□ -0.79
SSX2B-201ENST00000288839 ZFYVE9O95405 1425 aa10.1□□□□□ -0.79
SSX2B-201ENST00000288839 UBAP1LF5GYI3 381 aa10.1□□□□□ -0.79
SSX2B-201ENST00000288839 HRCP23327 699 aa10.1□□□□□ -0.79
SSX2B-201ENST00000288839 TXNDC2Q86VQ3 553 aa10.1□□□□□ -0.79
SSX2B-201ENST00000288839 ACIN1Q9UKV3 1341 aaKnown RBP10.09□□□□□ -0.79
SSX2B-201ENST00000288839 TRPM2O94759 1503 aa10.09□□□□□ -0.79
SSX2B-201ENST00000288839 CLTCL1P53675 1640 aa10.09□□□□□ -0.79
SSX2B-201ENST00000288839 NUTM2DQ5VT03 806 aaPredicted RBP10.08□□□□□ -0.8
SSX2B-201ENST00000288839 PIP4K2BP78356 416 aa10.07□□□□□ -0.8
SSX2B-201ENST00000288839 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
SSX2B-201ENST00000288839 SLC26A8Q96RN1 970 aa10.07□□□□□ -0.8
SSX2B-201ENST00000288839 EID1Q9Y6B2 187 aa10.07□□□□□ -0.8
SSX2B-201ENST00000288839 RIMS2Q9UQ26 1411 aa10.07□□□□□ -0.8
SSX2B-201ENST00000288839 NWD1Q149M9 1564 aa10.06□□□□□ -0.8
SSX2B-201ENST00000288839 ZNF326Q5BKZ1 582 aaKnown RBP10.05□□□□□ -0.8
SSX2B-201ENST00000288839 PCGF6Q9BYE7 350 aa10.05□□□□□ -0.8
SSX2B-201ENST00000288839 CCDC144AA2RUR9 1427 aa10.05□□□□□ -0.8
SSX2B-201ENST00000288839 NRXN3Q9Y4C0 1643 aa10.04□□□□□ -0.8
SSX2B-201ENST00000288839 PPP1R15AO75807 674 aaPredicted RBP10.04□□□□□ -0.8
SSX2B-201ENST00000288839 AKT1S1Q96B36 256 aa10.04□□□□□ -0.8
SSX2B-201ENST00000288839 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
SSX2B-201ENST00000288839 HSPA1LP34931 641 aa10.03□□□□□ -0.8
SSX2B-201ENST00000288839 ADAMTS13Q76LX8 1427 aa10.03□□□□□ -0.8
SSX2B-201ENST00000288839 TMEM94Q12767 1356 aa10.02□□□□□ -0.8
SSX2B-201ENST00000288839 PLEKHG1Q9ULL1 1385 aa10.02□□□□□ -0.8
SSX2B-201ENST00000288839 RGL3Q3MIN7 710 aa10.02□□□□□ -0.81
SSX2B-201ENST00000288839 BCANQ96GW7 911 aa10.02□□□□□ -0.81
SSX2B-201ENST00000288839 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.81
SSX2B-201ENST00000288839 DISP3Q9P2K9 1392 aa10.01□□□□□ -0.81
SSX2B-201ENST00000288839 KIF1BO60333 1816 aa10.01□□□□□ -0.81
SSX2B-201ENST00000288839 HDGFP51858 240 aaKnown RBP10.01□□□□□ -0.81
SSX2B-201ENST00000288839 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSX2B-201ENST00000288839 SPATA31E1Q6ZUB1 1445 aa10□□□□□ -0.81
SSX2B-201ENST00000288839 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
SSX2B-201ENST00000288839 CHD2O14647 1828 aaKnown RBP10□□□□□ -0.81
SSX2B-201ENST00000288839 DHX57Q6P158 1386 aaKnown RBP10□□□□□ -0.81
SSX2B-201ENST00000288839 MED1Q15648 1581 aaPredicted RBP9.99□□□□□ -0.81
SSX2B-201ENST00000288839 PTPRUQ92729 1446 aa9.99□□□□□ -0.81
SSX2B-201ENST00000288839 DIP2AQ14689 1571 aa9.98□□□□□ -0.81
SSX2B-201ENST00000288839 ILDR2Q71H61 639 aa9.98□□□□□ -0.81
SSX2B-201ENST00000288839 SP7Q8TDD2 431 aaPredicted RBP9.98□□□□□ -0.81
SSX2B-201ENST00000288839 ROBO1Q9Y6N7 1651 aa9.98□□□□□ -0.81
SSX2B-201ENST00000288839 XRN1Q8IZH2 1706 aaKnown RBP9.98□□□□□ -0.81
SSX2B-201ENST00000288839 SETBP1Q9Y6X0 1596 aa9.97□□□□□ -0.81
SSX2B-201ENST00000288839 TOM1O60784 492 aa9.97□□□□□ -0.81
SSX2B-201ENST00000288839 KCNA6P17658 529 aa9.97□□□□□ -0.81
SSX2B-201ENST00000288839 RPGRIP1LQ68CZ1 1315 aa9.97□□□□□ -0.81
SSX2B-201ENST00000288839 SETD1AO15047 1707 aaKnown RBP9.96□□□□□ -0.81
SSX2B-201ENST00000288839 VGFO15240 615 aaPredicted RBP9.96□□□□□ -0.82
SSX2B-201ENST00000288839 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.82
SSX2B-201ENST00000288839 ADGRF5Q8IZF2 1346 aa9.96□□□□□ -0.82
SSX2B-201ENST00000288839 PROSER2Q86WR7 435 aaPredicted RBP9.95□□□□□ -0.82
SSX2B-201ENST00000288839 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
SSX2B-201ENST00000288839 PPLO60437 1756 aa9.95□□□□□ -0.82
SSX2B-201ENST00000288839 METP08581 1390 aa9.94□□□□□ -0.82
SSX2B-201ENST00000288839 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
SSX2B-201ENST00000288839 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
SSX2B-201ENST00000288839 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
SSX2B-201ENST00000288839 NALCNQ8IZF0 1738 aa9.93□□□□□ -0.82
SSX2B-201ENST00000288839 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms