RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PMFBP1Q8TBY8 1022 aa15.81■□□□□ 0.12
SLC6A1-201ENST00000287766 SLC12A5Q9H2X9 1139 aa15.81■□□□□ 0.12
SLC6A1-201ENST00000287766 USP35Q9P2H5 1018 aa15.81■□□□□ 0.12
SLC6A1-201ENST00000287766 UGGT2Q9NYU1 1516 aa15.8■□□□□ 0.12
SLC6A1-201ENST00000287766 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
SLC6A1-201ENST00000287766 MTHFSP49914 203 aa15.79■□□□□ 0.12
SLC6A1-201ENST00000287766 CABP2Q9NPB3 220 aa15.79■□□□□ 0.12
SLC6A1-201ENST00000287766 IL27Q8NEV9 243 aa15.79■□□□□ 0.12
SLC6A1-201ENST00000287766 BACH2Q9BYV9 841 aa15.78■□□□□ 0.12
SLC6A1-201ENST00000287766 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
SLC6A1-201ENST00000287766 CGNL1Q0VF96 1302 aa15.78■□□□□ 0.12
SLC6A1-201ENST00000287766 TERF2IPQ9NYB0 399 aa15.78■□□□□ 0.12
SLC6A1-201ENST00000287766 TCP11L2Q8N4U5 519 aa15.77■□□□□ 0.12
SLC6A1-201ENST00000287766 LMOD2Q6P5Q4 547 aa15.77■□□□□ 0.11
SLC6A1-201ENST00000287766 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
SLC6A1-201ENST00000287766 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
SLC6A1-201ENST00000287766 MAGI1Q96QZ7 1491 aaPredicted RBP15.75■□□□□ 0.11
SLC6A1-201ENST00000287766 CFAP43Q8NDM7 1665 aa15.75■□□□□ 0.11
SLC6A1-201ENST00000287766 TNNT3P45378 269 aaPredicted RBP15.74■□□□□ 0.11
SLC6A1-201ENST00000287766 ZKSCAN2Q63HK3 967 aa15.74■□□□□ 0.11
SLC6A1-201ENST00000287766 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
SLC6A1-201ENST00000287766 NFKBIBQ15653 356 aa15.74■□□□□ 0.11
SLC6A1-201ENST00000287766 EVC2Q86UK5 1308 aa15.74■□□□□ 0.11
SLC6A1-201ENST00000287766 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
SLC6A1-201ENST00000287766 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
SLC6A1-201ENST00000287766 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
SLC6A1-201ENST00000287766 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
SLC6A1-201ENST00000287766 A0A0U1RQG5 324 aaPredicted RBP15.72■□□□□ 0.11
SLC6A1-201ENST00000287766 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
SLC6A1-201ENST00000287766 GBP4Q96PP9 640 aa15.72■□□□□ 0.11
SLC6A1-201ENST00000287766 NUP153P49790 1475 aaKnown RBP15.72■□□□□ 0.11
SLC6A1-201ENST00000287766 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
SLC6A1-201ENST00000287766 RIPK4P57078 832 aa15.71■□□□□ 0.11
SLC6A1-201ENST00000287766 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
SLC6A1-201ENST00000287766 DISP3Q9P2K9 1392 aa15.71■□□□□ 0.11
SLC6A1-201ENST00000287766 HMOX1P09601 288 aa15.71■□□□□ 0.1
SLC6A1-201ENST00000287766 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.1
SLC6A1-201ENST00000287766 DRC7Q8IY82 874 aa15.7■□□□□ 0.1
SLC6A1-201ENST00000287766 ANKRD45Q5TZF3 282 aa15.69■□□□□ 0.1
SLC6A1-201ENST00000287766 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
SLC6A1-201ENST00000287766 SLC4A10Q6U841 1118 aa15.69■□□□□ 0.1
SLC6A1-201ENST00000287766 CTTNBP2Q8WZ74 1663 aa15.69■□□□□ 0.1
SLC6A1-201ENST00000287766 BRPF3Q9ULD4 1205 aa15.68■□□□□ 0.1
SLC6A1-201ENST00000287766 FRAT2O75474 233 aaPredicted RBP15.68■□□□□ 0.1
SLC6A1-201ENST00000287766 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
SLC6A1-201ENST00000287766 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
SLC6A1-201ENST00000287766 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
SLC6A1-201ENST00000287766 LNPKQ9C0E8 428 aa15.67■□□□□ 0.1
SLC6A1-201ENST00000287766 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
SLC6A1-201ENST00000287766 CCDC141Q6ZP82 1450 aa15.66■□□□□ 0.1
SLC6A1-201ENST00000287766 MAGI3Q5TCQ9 1506 aa15.66■□□□□ 0.1
SLC6A1-201ENST00000287766 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
SLC6A1-201ENST00000287766 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
SLC6A1-201ENST00000287766 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
SLC6A1-201ENST00000287766 NRDCO43847 1150 aa15.64■□□□□ 0.09
SLC6A1-201ENST00000287766 EXOSC9Q06265 439 aaKnown RBP15.64■□□□□ 0.09
SLC6A1-201ENST00000287766 SLFN5Q08AF3 891 aa15.64■□□□□ 0.09
SLC6A1-201ENST00000287766 NOL8Q76FK4 1167 aaKnown RBP15.64■□□□□ 0.09
SLC6A1-201ENST00000287766 DHX29Q7Z478 1369 aaKnown RBP15.64■□□□□ 0.09
SLC6A1-201ENST00000287766 LTV1Q96GA3 475 aaPredicted RBP15.64■□□□□ 0.09
SLC6A1-201ENST00000287766 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
SLC6A1-201ENST00000287766 PDZRN3Q9UPQ7 1066 aa15.63■□□□□ 0.09
SLC6A1-201ENST00000287766 RAPGEF3O95398 923 aa15.63■□□□□ 0.09
SLC6A1-201ENST00000287766 OS9Q13438 667 aaPredicted RBP15.63■□□□□ 0.09
SLC6A1-201ENST00000287766 ADGRF5Q8IZF2 1346 aa15.63■□□□□ 0.09
SLC6A1-201ENST00000287766 FOXD4L5Q5VV16 416 aaPredicted RBP15.62■□□□□ 0.09
SLC6A1-201ENST00000287766 FOXD4L4Q8WXT5 416 aaPredicted RBP15.62■□□□□ 0.09
SLC6A1-201ENST00000287766 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
SLC6A1-201ENST00000287766 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
SLC6A1-201ENST00000287766 WWC1Q8IX03 1113 aa15.61■□□□□ 0.09
SLC6A1-201ENST00000287766 ATP10BO94823 1461 aa15.61■□□□□ 0.09
SLC6A1-201ENST00000287766 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
SLC6A1-201ENST00000287766 GOLGA6L6A8MZA4 724 aa15.6■□□□□ 0.09
SLC6A1-201ENST00000287766 DDX19BQ9UMR2 479 aa15.6■□□□□ 0.09
SLC6A1-201ENST00000287766 A0A0G2JS52 829 aa15.59■□□□□ 0.09
SLC6A1-201ENST00000287766 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
SLC6A1-201ENST00000287766 PZPP20742 1482 aa15.59■□□□□ 0.09
SLC6A1-201ENST00000287766 NECTIN2Q92692 538 aa15.59■□□□□ 0.09
SLC6A1-201ENST00000287766 WDR62O43379 1518 aa15.59■□□□□ 0.09
SLC6A1-201ENST00000287766 PRAM1Q96QH2 718 aa15.58■□□□□ 0.09
SLC6A1-201ENST00000287766 KDM6BO15054 1643 aa15.58■□□□□ 0.09
SLC6A1-201ENST00000287766 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.08
SLC6A1-201ENST00000287766 FGD1P98174 961 aa15.58■□□□□ 0.08
SLC6A1-201ENST00000287766 TESK2Q96S53 571 aa15.58■□□□□ 0.08
SLC6A1-201ENST00000287766 KIF14Q15058 1648 aa15.58■□□□□ 0.08
SLC6A1-201ENST00000287766 KCNJ4P48050 445 aa15.58■□□□□ 0.08
SLC6A1-201ENST00000287766 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
SLC6A1-201ENST00000287766 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
SLC6A1-201ENST00000287766 COG3Q96JB2 828 aa15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 C22orf23Q9BZE7 217 aa15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 PRKAR2BP31323 418 aa15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 FOXD4L6Q3SYB3 417 aaPredicted RBP15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 FOXD4L3Q6VB84 417 aaPredicted RBP15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
SLC6A1-201ENST00000287766 TEX14Q8IWB6 1497 aa15.55■□□□□ 0.08
SLC6A1-201ENST00000287766 TRIM6-TRIM34B2RNG4 842 aa15.55■□□□□ 0.08
SLC6A1-201ENST00000287766 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
SLC6A1-201ENST00000287766 PER1O15534 1290 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms