RNA–Protein interactions for RNA: ENST00000281589.4

PABPC3-201, Transcript of poly(A) binding protein cytoplasmic 3, humanhuman

APPRIS P1 BASIC

Gene PABPC3, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC3-201ENST00000281589 ABCA8O94911 1581 aa11.82□□□□□ -0.52
PABPC3-201ENST00000281589 IRX3P78415 501 aaPredicted RBP11.81□□□□□ -0.52
PABPC3-201ENST00000281589 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
PABPC3-201ENST00000281589 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
PABPC3-201ENST00000281589 CDK11BP21127 795 aaKnown RBP11.8□□□□□ -0.52
PABPC3-201ENST00000281589 RALGAPBQ86X10 1494 aa11.8□□□□□ -0.52
PABPC3-201ENST00000281589 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
PABPC3-201ENST00000281589 ZBTB22O15209 634 aa11.8□□□□□ -0.52
PABPC3-201ENST00000281589 UHRF1BP1Q6BDS2 1440 aa11.8□□□□□ -0.52
PABPC3-201ENST00000281589 E9PSI1 815 aa11.79□□□□□ -0.52
PABPC3-201ENST00000281589 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
PABPC3-201ENST00000281589 SHANK2Q9UPX8 1470 aa11.79□□□□□ -0.52
PABPC3-201ENST00000281589 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
PABPC3-201ENST00000281589 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
PABPC3-201ENST00000281589 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
PABPC3-201ENST00000281589 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
PABPC3-201ENST00000281589 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
PABPC3-201ENST00000281589 RIPK4P57078 832 aa11.78□□□□□ -0.52
PABPC3-201ENST00000281589 POGKQ9P215 609 aa11.78□□□□□ -0.52
PABPC3-201ENST00000281589 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
PABPC3-201ENST00000281589 KDM5DQ9BY66 1539 aa11.77□□□□□ -0.53
PABPC3-201ENST00000281589 ARHGEF12Q9NZN5 1544 aa11.77□□□□□ -0.53
PABPC3-201ENST00000281589 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
PABPC3-201ENST00000281589 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
PABPC3-201ENST00000281589 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
PABPC3-201ENST00000281589 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
PABPC3-201ENST00000281589 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
PABPC3-201ENST00000281589 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
PABPC3-201ENST00000281589 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
PABPC3-201ENST00000281589 CHD1O14646 1710 aa11.75□□□□□ -0.53
PABPC3-201ENST00000281589 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
PABPC3-201ENST00000281589 CERS3Q8IU89 383 aa11.75□□□□□ -0.53
PABPC3-201ENST00000281589 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
PABPC3-201ENST00000281589 PNISRQ8TF01 805 aaKnown RBP11.75□□□□□ -0.53
PABPC3-201ENST00000281589 MAP7D2Q96T17 732 aa11.75□□□□□ -0.53
PABPC3-201ENST00000281589 KIAA1211Q6ZU35 1233 aa11.74□□□□□ -0.53
PABPC3-201ENST00000281589 ARID3AQ99856 593 aa11.74□□□□□ -0.53
PABPC3-201ENST00000281589 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
PABPC3-201ENST00000281589 MMP14P50281 582 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 CCDC144AA2RUR9 1427 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
PABPC3-201ENST00000281589 PDE4AP27815 886 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 ARHGEF5Q12774 1597 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 EFCAB2Q5VUJ9 269 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 PANK2Q9BZ23 570 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
PABPC3-201ENST00000281589 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
PABPC3-201ENST00000281589 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
PABPC3-201ENST00000281589 FAM135AQ9P2D6 1515 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 ESPNB1AK53 854 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 KIF20AO95235 890 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 DNTTIP2Q5QJE6 756 aaKnown RBP11.71□□□□□ -0.53
PABPC3-201ENST00000281589 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
PABPC3-201ENST00000281589 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 E9PCH4 1651 aa11.71□□□□□ -0.53
PABPC3-201ENST00000281589 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.54
PABPC3-201ENST00000281589 PSEN1P49768 467 aa11.71□□□□□ -0.54
PABPC3-201ENST00000281589 NGEFQ8N5V2 710 aa11.71□□□□□ -0.54
PABPC3-201ENST00000281589 FBXO3Q9UK99 471 aa11.71□□□□□ -0.54
PABPC3-201ENST00000281589 FAM193AP78312 1265 aa11.7□□□□□ -0.54
PABPC3-201ENST00000281589 PREX2Q70Z35 1606 aa11.7□□□□□ -0.54
PABPC3-201ENST00000281589 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
PABPC3-201ENST00000281589 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
PABPC3-201ENST00000281589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.69□□□□□ -0.54
PABPC3-201ENST00000281589 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
PABPC3-201ENST00000281589 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
PABPC3-201ENST00000281589 FAM43BQ6ZT52 329 aaPredicted RBP11.68□□□□□ -0.54
PABPC3-201ENST00000281589 BRD4O60885 1362 aaPredicted RBP11.68□□□□□ -0.54
PABPC3-201ENST00000281589 PATL2C9JE40 543 aaKnown RBP11.68□□□□□ -0.54
PABPC3-201ENST00000281589 SOX12O15370 315 aa11.68□□□□□ -0.54
PABPC3-201ENST00000281589 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
PABPC3-201ENST00000281589 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
PABPC3-201ENST00000281589 RALBP1Q15311 655 aa11.67□□□□□ -0.54
PABPC3-201ENST00000281589 AEBP1Q8IUX7 1158 aa11.67□□□□□ -0.54
PABPC3-201ENST00000281589 CHMP4CQ96CF2 233 aa11.67□□□□□ -0.54
PABPC3-201ENST00000281589 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
PABPC3-201ENST00000281589 CLGNO14967 610 aa11.66□□□□□ -0.54
PABPC3-201ENST00000281589 KIF3BO15066 747 aa11.66□□□□□ -0.54
PABPC3-201ENST00000281589 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
PABPC3-201ENST00000281589 GRIPAP1Q4V328 841 aa11.65□□□□□ -0.54
PABPC3-201ENST00000281589 ABCC2Q92887 1545 aa11.65□□□□□ -0.55
PABPC3-201ENST00000281589 PLA2R1Q13018 1463 aa11.64□□□□□ -0.55
PABPC3-201ENST00000281589 KTN1Q86UP2 1357 aaKnown RBP11.64□□□□□ -0.55
PABPC3-201ENST00000281589 LETM1O95202 739 aaPredicted RBP11.64□□□□□ -0.55
PABPC3-201ENST00000281589 A2MP01023 1474 aa11.64□□□□□ -0.55
PABPC3-201ENST00000281589 UNC13BO14795 1591 aa11.64□□□□□ -0.55
PABPC3-201ENST00000281589 GTPBP4Q9BZE4 634 aaKnown RBP11.63□□□□□ -0.55
PABPC3-201ENST00000281589 PANK3Q9H999 370 aa11.63□□□□□ -0.55
PABPC3-201ENST00000281589 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
PABPC3-201ENST00000281589 PARD3Q8TEW0 1356 aa11.63□□□□□ -0.55
PABPC3-201ENST00000281589 FSD2A1L4K1 749 aa11.62□□□□□ -0.55
PABPC3-201ENST00000281589 MYO5CQ9NQX4 1742 aa11.62□□□□□ -0.55
PABPC3-201ENST00000281589 APPP05067 770 aa11.62□□□□□ -0.55
PABPC3-201ENST00000281589 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
PABPC3-201ENST00000281589 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
PABPC3-201ENST00000281589 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms