RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
PDCD4-201ENST00000280154 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
PDCD4-201ENST00000280154 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
PDCD4-201ENST00000280154 PLA2R1Q13018 1463 aa13.35□□□□□ -0.27
PDCD4-201ENST00000280154 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
PDCD4-201ENST00000280154 CLTCL1P53675 1640 aa13.33□□□□□ -0.28
PDCD4-201ENST00000280154 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
PDCD4-201ENST00000280154 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
PDCD4-201ENST00000280154 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
PDCD4-201ENST00000280154 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
PDCD4-201ENST00000280154 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
PDCD4-201ENST00000280154 NPATQ14207 1427 aa13.32□□□□□ -0.28
PDCD4-201ENST00000280154 PPLO60437 1756 aa13.31□□□□□ -0.28
PDCD4-201ENST00000280154 ZMYND15Q9H091 742 aa13.31□□□□□ -0.28
PDCD4-201ENST00000280154 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
PDCD4-201ENST00000280154 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
PDCD4-201ENST00000280154 LAMC1P11047 1609 aa13.3□□□□□ -0.28
PDCD4-201ENST00000280154 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
PDCD4-201ENST00000280154 UBR1Q8IWV7 1749 aa13.3□□□□□ -0.28
PDCD4-201ENST00000280154 KIF1BO60333 1816 aa13.3□□□□□ -0.28
PDCD4-201ENST00000280154 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
PDCD4-201ENST00000280154 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
PDCD4-201ENST00000280154 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
PDCD4-201ENST00000280154 ANKRD30BQ9BXX2 1392 aa13.29□□□□□ -0.28
PDCD4-201ENST00000280154 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
PDCD4-201ENST00000280154 FKBP8Q14318 412 aa13.28□□□□□ -0.28
PDCD4-201ENST00000280154 NRXN1Q9ULB1 1477 aa13.28□□□□□ -0.28
PDCD4-201ENST00000280154 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
PDCD4-201ENST00000280154 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.28
PDCD4-201ENST00000280154 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.28
PDCD4-201ENST00000280154 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.28
PDCD4-201ENST00000280154 CHMP4BQ9H444 224 aaKnown RBP13.27□□□□□ -0.29
PDCD4-201ENST00000280154 CNPY4Q8N129 248 aa13.26□□□□□ -0.29
PDCD4-201ENST00000280154 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
PDCD4-201ENST00000280154 ZNF777Q9ULD5 760 aaPredicted RBP13.25□□□□□ -0.29
PDCD4-201ENST00000280154 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
PDCD4-201ENST00000280154 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
PDCD4-201ENST00000280154 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
PDCD4-201ENST00000280154 SLIT1O75093 1534 aa13.22□□□□□ -0.29
PDCD4-201ENST00000280154 MYOM2P54296 1465 aa13.22□□□□□ -0.29
PDCD4-201ENST00000280154 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.29
PDCD4-201ENST00000280154 NLRP1Q9C000 1473 aa13.21□□□□□ -0.29
PDCD4-201ENST00000280154 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
PDCD4-201ENST00000280154 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
PDCD4-201ENST00000280154 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
PDCD4-201ENST00000280154 RRP7BPQ9NSQ0 103 aa13.2□□□□□ -0.3
PDCD4-201ENST00000280154 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
PDCD4-201ENST00000280154 NRXN3Q9Y4C0 1643 aa13.19□□□□□ -0.3
PDCD4-201ENST00000280154 POLR1AO95602 1720 aaPredicted RBP13.18□□□□□ -0.3
PDCD4-201ENST00000280154 KANK1Q14678 1352 aa13.18□□□□□ -0.3
PDCD4-201ENST00000280154 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
PDCD4-201ENST00000280154 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
PDCD4-201ENST00000280154 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
PDCD4-201ENST00000280154 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
PDCD4-201ENST00000280154 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
PDCD4-201ENST00000280154 ZBTB22O15209 634 aa13.16□□□□□ -0.3
PDCD4-201ENST00000280154 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
PDCD4-201ENST00000280154 NUP155O75694 1391 aa13.16□□□□□ -0.3
PDCD4-201ENST00000280154 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
PDCD4-201ENST00000280154 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
PDCD4-201ENST00000280154 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
PDCD4-201ENST00000280154 PTPRMP28827 1452 aa13.15□□□□□ -0.3
PDCD4-201ENST00000280154 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
PDCD4-201ENST00000280154 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
PDCD4-201ENST00000280154 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
PDCD4-201ENST00000280154 IQGAP1P46940 1657 aa13.13□□□□□ -0.31
PDCD4-201ENST00000280154 A2ML1A8K2U0 1454 aa13.13□□□□□ -0.31
PDCD4-201ENST00000280154 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
PDCD4-201ENST00000280154 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
PDCD4-201ENST00000280154 PCGF6Q9BYE7 350 aa13.12□□□□□ -0.31
PDCD4-201ENST00000280154 MED14O60244 1454 aa13.11□□□□□ -0.31
PDCD4-201ENST00000280154 ARID4BQ4LE39 1312 aaPredicted RBP13.1□□□□□ -0.31
PDCD4-201ENST00000280154 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
PDCD4-201ENST00000280154 KIF3BO15066 747 aa13.08□□□□□ -0.31
PDCD4-201ENST00000280154 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
PDCD4-201ENST00000280154 NWD1Q149M9 1564 aa13.08□□□□□ -0.32
PDCD4-201ENST00000280154 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
PDCD4-201ENST00000280154 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
PDCD4-201ENST00000280154 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
PDCD4-201ENST00000280154 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
PDCD4-201ENST00000280154 XRN1Q8IZH2 1706 aaKnown RBP13.06□□□□□ -0.32
PDCD4-201ENST00000280154 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
PDCD4-201ENST00000280154 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
PDCD4-201ENST00000280154 GPRASP1Q5JY77 1395 aa13.04□□□□□ -0.32
PDCD4-201ENST00000280154 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
PDCD4-201ENST00000280154 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
PDCD4-201ENST00000280154 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
PDCD4-201ENST00000280154 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
PDCD4-201ENST00000280154 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
PDCD4-201ENST00000280154 ASXL1Q8IXJ9 1541 aa13.03□□□□□ -0.32
PDCD4-201ENST00000280154 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
PDCD4-201ENST00000280154 RBM25P49756 843 aaKnown RBP13.02□□□□□ -0.32
PDCD4-201ENST00000280154 SLC52A1Q9NWF4 448 aa13.02□□□□□ -0.32
PDCD4-201ENST00000280154 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.32
PDCD4-201ENST00000280154 LMTK3Q96Q04 1460 aa13.02□□□□□ -0.32
PDCD4-201ENST00000280154 BCCIPQ9P287 314 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDCD4-201ENST00000280154 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
PDCD4-201ENST00000280154 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
PDCD4-201ENST00000280154 PKD2Q13563 968 aa13.01□□□□□ -0.33
PDCD4-201ENST00000280154 TNRQ92752 1358 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms