RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 RAI14Q9P0K7 980 aa13.26□□□□□ -0.29
ERGIC3-201ENST00000279052 CALCOCO1Q9P1Z2 691 aa13.26□□□□□ -0.29
ERGIC3-201ENST00000279052 WDR97A6NE52 1622 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 CT47A1Q5JQC4 288 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 GABPB1Q06547 395 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 HS1BP3Q53T59 392 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 NCAPGQ9BPX3 1015 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 SMC4Q9NTJ3 1288 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 NINLQ9Y2I6 1382 aa13.25□□□□□ -0.29
ERGIC3-201ENST00000279052 CCDC172P0C7W6 258 aa13.24□□□□□ -0.29
ERGIC3-201ENST00000279052 TNNT3P45378 269 aaPredicted RBP13.24□□□□□ -0.29
ERGIC3-201ENST00000279052 MLECQ14165 292 aa13.24□□□□□ -0.29
ERGIC3-201ENST00000279052 MPNDQ8N594 471 aa13.24□□□□□ -0.29
ERGIC3-201ENST00000279052 MCM4P33991 863 aa13.22□□□□□ -0.29
ERGIC3-201ENST00000279052 NBPF9Q3BBW0 867 aa13.22□□□□□ -0.29
ERGIC3-201ENST00000279052 TRAK2O60296 914 aa13.22□□□□□ -0.29
ERGIC3-201ENST00000279052 MFAP1P55081 439 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-201ENST00000279052 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-201ENST00000279052 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-201ENST00000279052 FAM161AQ3B820 660 aa13.21□□□□□ -0.29
ERGIC3-201ENST00000279052 RNF217Q8TC41 542 aa13.21□□□□□ -0.3
ERGIC3-201ENST00000279052 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
ERGIC3-201ENST00000279052 MAFGO15525 162 aa13.2□□□□□ -0.3
ERGIC3-201ENST00000279052 MYRIPQ8NFW9 859 aa13.2□□□□□ -0.3
ERGIC3-201ENST00000279052 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
ERGIC3-201ENST00000279052 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
ERGIC3-201ENST00000279052 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-201ENST00000279052 ZNF710Q8N1W2 664 aa13.18□□□□□ -0.3
ERGIC3-201ENST00000279052 FEZ2Q9UHY8 353 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-201ENST00000279052 FAM9BQ8IZU0 186 aa13.18□□□□□ -0.3
ERGIC3-201ENST00000279052 STK26Q9P289 416 aa13.18□□□□□ -0.3
ERGIC3-201ENST00000279052 PCF11O94913 1555 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-201ENST00000279052 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 FEZ1Q99689 392 aa13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-201ENST00000279052 CFAP43Q8NDM7 1665 aa13.16□□□□□ -0.3
ERGIC3-201ENST00000279052 MCM5P33992 734 aa13.16□□□□□ -0.3
ERGIC3-201ENST00000279052 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
ERGIC3-201ENST00000279052 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
ERGIC3-201ENST00000279052 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-201ENST00000279052 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
ERGIC3-201ENST00000279052 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
ERGIC3-201ENST00000279052 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-201ENST00000279052 OTUD6BQ8N6M0 293 aa13.15□□□□□ -0.3
ERGIC3-201ENST00000279052 HIRIP3Q9BW71 556 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-201ENST00000279052 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
ERGIC3-201ENST00000279052 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-201ENST00000279052 FYCO1Q9BQS8 1478 aa13.14□□□□□ -0.31
ERGIC3-201ENST00000279052 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
ERGIC3-201ENST00000279052 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
ERGIC3-201ENST00000279052 HMGN5P82970 282 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 PANK3Q9H999 370 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 SLFN14P0C7P3 912 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 OGFRQ9NZT2 677 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
ERGIC3-201ENST00000279052 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 ICE2Q659A1 982 aa13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
ERGIC3-201ENST00000279052 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 DHX16O60231 1041 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 ZKSCAN8Q15776 578 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 MRS2Q9HD23 443 aa13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
ERGIC3-201ENST00000279052 CASC1Q6TDU7 716 aa13.1□□□□□ -0.31
ERGIC3-201ENST00000279052 ZKSCAN5Q9Y2L8 839 aa13.1□□□□□ -0.31
ERGIC3-201ENST00000279052 TDO2P48775 406 aa13.1□□□□□ -0.31
ERGIC3-201ENST00000279052 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.313e-8■■■■□ 19.7
ERGIC3-201ENST00000279052 ZNF853P0CG23 659 aa13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-201ENST00000279052 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms