RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 IRX6P78412 446 aaPredicted RBP33.88■■■■□ 3.01
ROM1-201ENST00000278833 NBPF1Q3BBV0 1214 aa33.87■■■■□ 3.01
ROM1-201ENST00000278833 ABCA6Q8N139 1617 aa33.87■■■■□ 3.01
ROM1-201ENST00000278833 DIP2CQ9Y2E4 1556 aa33.86■■■■□ 3.01
ROM1-201ENST00000278833 CLTCL1P53675 1640 aa33.86■■■■□ 3.01
ROM1-201ENST00000278833 PER1O15534 1290 aaPredicted RBP33.84■■■■□ 3.01
ROM1-201ENST00000278833 NLRP13Q86W25 1043 aa33.84■■■■□ 3.01
ROM1-201ENST00000278833 RGL3Q3MIN7 710 aa33.83■■■■□ 3.01
ROM1-201ENST00000278833 DISP3Q9P2K9 1392 aa33.82■■■■□ 3
ROM1-201ENST00000278833 MROH1Q8NDA8 1641 aa33.8■■■■□ 3
ROM1-201ENST00000278833 SIGLEC1Q9BZZ2 1709 aa33.76■■■□□ 2.99
ROM1-201ENST00000278833 TMF1P82094 1093 aa33.75■■■□□ 2.99
ROM1-201ENST00000278833 SYNMO15061 1565 aa33.74■■■□□ 2.99
ROM1-201ENST00000278833 ANP32EQ9BTT0 268 aa33.73■■■□□ 2.99
ROM1-201ENST00000278833 KANK1Q14678 1352 aa33.73■■■□□ 2.99
ROM1-201ENST00000278833 FANCIQ9NVI1 1328 aa33.72■■■□□ 2.99
ROM1-201ENST00000278833 SCAF11Q99590 1463 aaKnown RBP33.72■■■□□ 2.99
ROM1-201ENST00000278833 REREQ9P2R6 1566 aa33.71■■■□□ 2.99
ROM1-201ENST00000278833 LMTK2Q8IWU2 1503 aa33.7■■■□□ 2.99
ROM1-201ENST00000278833 BLMP54132 1417 aaPredicted RBP33.7■■■□□ 2.99
ROM1-201ENST00000278833 MYOM2P54296 1465 aa33.7■■■□□ 2.99
ROM1-201ENST00000278833 IFT172Q9UG01 1749 aa33.68■■■□□ 2.98
ROM1-201ENST00000278833 EFCAB6Q5THR3 1501 aa33.67■■■□□ 2.98
ROM1-201ENST00000278833 PDE3BQ13370 1112 aa33.67■■■□□ 2.98
ROM1-201ENST00000278833 AGLP35573 1532 aa33.62■■■□□ 2.97
ROM1-201ENST00000278833 MYOM1P52179 1685 aa33.61■■■□□ 2.97
ROM1-201ENST00000278833 KIF1BO60333 1816 aa33.61■■■□□ 2.97
ROM1-201ENST00000278833 MLECQ14165 292 aa33.61■■■□□ 2.97
ROM1-201ENST00000278833 CNGB1Q14028 1251 aaPredicted RBP33.6■■■□□ 2.97
ROM1-201ENST00000278833 B4GALNT3Q6L9W6 998 aa33.59■■■□□ 2.97
ROM1-201ENST00000278833 PANK3Q9H999 370 aa33.58■■■□□ 2.97
ROM1-201ENST00000278833 CDCA8Q53HL2 280 aa33.57■■■□□ 2.96
ROM1-201ENST00000278833 EIF3AQ14152 1382 aaKnown RBP33.57■■■□□ 2.96
ROM1-201ENST00000278833 NPC1L1Q9UHC9 1359 aa33.56■■■□□ 2.96
ROM1-201ENST00000278833 MYO3AQ8NEV4 1616 aa33.55■■■□□ 2.96
ROM1-201ENST00000278833 KIF3BO15066 747 aa33.55■■■□□ 2.96
ROM1-201ENST00000278833 KDM5AP29375 1690 aaKnown RBP33.55■■■□□ 2.96
ROM1-201ENST00000278833 NRXN1Q9ULB1 1477 aa33.55■■■□□ 2.96
ROM1-201ENST00000278833 KDM4FA0A1W2PPD8 638 aa33.54■■■□□ 2.96
ROM1-201ENST00000278833 SLC24A1O60721 1099 aa33.5■■■□□ 2.95
ROM1-201ENST00000278833 GGT6Q6P531 493 aa33.5■■■□□ 2.95
ROM1-201ENST00000278833 ASXL1Q8IXJ9 1541 aa33.5■■■□□ 2.95
ROM1-201ENST00000278833 MROH2AA6NES4 1674 aa33.48■■■□□ 2.95
ROM1-201ENST00000278833 ADGRB3O60242 1522 aa33.48■■■□□ 2.95
ROM1-201ENST00000278833 ADAMTSL3P82987 1691 aa33.46■■■□□ 2.95
ROM1-201ENST00000278833 SETBP1Q9Y6X0 1596 aa33.46■■■□□ 2.95
ROM1-201ENST00000278833 PIK3C2GO75747 1445 aa33.45■■■□□ 2.95
ROM1-201ENST00000278833 RRP1P56182 461 aaKnown RBP33.44■■■□□ 2.94
ROM1-201ENST00000278833 CC2D1BQ5T0F9 858 aaKnown RBP33.42■■■□□ 2.94
ROM1-201ENST00000278833 SBNO2Q9Y2G9 1366 aa33.42■■■□□ 2.94
ROM1-201ENST00000278833 UGGT1Q9NYU2 1555 aa33.4■■■□□ 2.94
ROM1-201ENST00000278833 AMER1Q5JTC6 1135 aaPredicted RBP33.39■■■□□ 2.94
ROM1-201ENST00000278833 CCDC136Q96JN2 1154 aa33.39■■■□□ 2.94
ROM1-201ENST00000278833 RCAN3Q9UKA8 241 aa33.39■■■□□ 2.94
ROM1-201ENST00000278833 ERVK-7P63135 1459 aa33.36■■■□□ 2.93
ROM1-201ENST00000278833 FER1L4A9Z1Z3 1794 aa33.36■■■□□ 2.93
ROM1-201ENST00000278833 PPLO60437 1756 aa33.36■■■□□ 2.93
ROM1-201ENST00000278833 KNSTRNQ9Y448 316 aa33.35■■■□□ 2.93
ROM1-201ENST00000278833 MSH5O43196 834 aa33.35■■■□□ 2.93
ROM1-201ENST00000278833 PPP6R1Q9UPN7 881 aa33.34■■■□□ 2.93
ROM1-201ENST00000278833 ESF1Q9H501 851 aaKnown RBP33.33■■■□□ 2.93
ROM1-201ENST00000278833 ZC3H13Q5T200 1668 aaKnown RBP33.32■■■□□ 2.93
ROM1-201ENST00000278833 RIMS1Q86UR5 1692 aaKnown RBP33.31■■■□□ 2.92
ROM1-201ENST00000278833 PPP2R1AP30153 589 aa33.31■■■□□ 2.92
ROM1-201ENST00000278833 PTPRMP28827 1452 aa33.26■■■□□ 2.92
ROM1-201ENST00000278833 CLTCQ00610 1675 aaKnown RBP33.25■■■□□ 2.91
ROM1-201ENST00000278833 ABCC3O15438 1527 aa33.25■■■□□ 2.91
ROM1-201ENST00000278833 NPATQ14207 1427 aa33.24■■■□□ 2.91
ROM1-201ENST00000278833 ADGRF5Q8IZF2 1346 aa33.23■■■□□ 2.91
ROM1-201ENST00000278833 PIK3C2BO00750 1634 aa33.22■■■□□ 2.91
ROM1-201ENST00000278833 CAMSAP1Q5T5Y3 1602 aa33.22■■■□□ 2.91
ROM1-201ENST00000278833 CEBPAP49715 358 aaPredicted RBP33.22■■■□□ 2.91
ROM1-201ENST00000278833 PLPPR3Q6T4P5 718 aa33.22■■■□□ 2.91
ROM1-201ENST00000278833 ZMYM3Q14202 1370 aa33.21■■■□□ 2.91
ROM1-201ENST00000278833 ADGRB1O14514 1584 aa33.2■■■□□ 2.91
ROM1-201ENST00000278833 ZNF521Q96K83 1311 aa33.19■■■□□ 2.9
ROM1-201ENST00000278833 USP32Q8NFA0 1604 aa33.19■■■□□ 2.9
ROM1-201ENST00000278833 SENP3-EIF4A1A0A087X0R7 540 aa33.18■■■□□ 2.9
ROM1-201ENST00000278833 CFAP70Q5T0N1 1121 aa33.18■■■□□ 2.9
ROM1-201ENST00000278833 NOS1P29475 1434 aa33.18■■■□□ 2.9
ROM1-201ENST00000278833 CDCA7LQ96GN5 454 aa33.18■■■□□ 2.9
ROM1-201ENST00000278833 ADAMTS8Q9UP79 889 aa33.18■■■□□ 2.9
ROM1-201ENST00000278833 RPGRIP1LQ68CZ1 1315 aa33.17■■■□□ 2.9
ROM1-201ENST00000278833 QRICH2Q9H0J4 1663 aa33.16■■■□□ 2.9
ROM1-201ENST00000278833 WDR43Q15061 677 aaKnown RBP eCLIP33.15■■■□□ 2.9
ROM1-201ENST00000278833 EXOC6Q8TAG9 804 aa33.14■■■□□ 2.9
ROM1-201ENST00000278833 C3P01024 1663 aa33.14■■■□□ 2.9
ROM1-201ENST00000278833 PLEKHH1Q9ULM0 1364 aa33.12■■■□□ 2.89
ROM1-201ENST00000278833 ARHGAP31Q2M1Z3 1444 aa33.1■■■□□ 2.89
ROM1-201ENST00000278833 SALL2Q9Y467 1007 aaPredicted RBP33.1■■■□□ 2.89
ROM1-201ENST00000278833 NGEFQ8N5V2 710 aa33.09■■■□□ 2.89
ROM1-201ENST00000278833 AEBP2Q6ZN18 517 aaPredicted RBP33.07■■■□□ 2.88
ROM1-201ENST00000278833 C14orf93Q9H972 538 aaKnown RBP33.07■■■□□ 2.88
ROM1-201ENST00000278833 CENPJQ9HC77 1338 aaPredicted RBP33.06■■■□□ 2.88
ROM1-201ENST00000278833 TCERG1O14776 1098 aaKnown RBP33.05■■■□□ 2.88
ROM1-201ENST00000278833 FBXO31Q5XUX0 539 aaPredicted RBP33.05■■■□□ 2.88
ROM1-201ENST00000278833 NEXMIFQ5QGS0 1516 aa33.04■■■□□ 2.88
ROM1-201ENST00000278833 DUSP27Q5VZP5 1158 aa33.03■■■□□ 2.88
ROM1-201ENST00000278833 POLR3AO14802 1390 aaPredicted RBP33.03■■■□□ 2.88
ROM1-201ENST00000278833 PUS7Q96PZ0 661 aaKnown RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms