RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 FRAT1Q92837 279 aaPredicted RBP23.48■■□□□ 1.35
SLC43A1-201ENST00000278426 C8orf34Q49A92 452 aa23.47■■□□□ 1.35
SLC43A1-201ENST00000278426 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
SLC43A1-201ENST00000278426 DAXXQ9UER7 740 aaPredicted RBP23.46■■□□□ 1.35
SLC43A1-201ENST00000278426 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
SLC43A1-201ENST00000278426 ERCC6L2Q5T890 1561 aa23.45■■□□□ 1.34
SLC43A1-201ENST00000278426 FAM161AQ3B820 660 aa23.45■■□□□ 1.34
SLC43A1-201ENST00000278426 TRAPPC8Q9Y2L5 1435 aa23.44■■□□□ 1.34
SLC43A1-201ENST00000278426 GOLGA2Q08379 1002 aa23.44■■□□□ 1.34
SLC43A1-201ENST00000278426 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
SLC43A1-201ENST00000278426 RNF17Q9BXT8 1623 aaKnown RBP23.43■■□□□ 1.34
SLC43A1-201ENST00000278426 RGS3P49796 1198 aa23.43■■□□□ 1.34
SLC43A1-201ENST00000278426 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
SLC43A1-201ENST00000278426 PLCH2O75038 1416 aa23.42■■□□□ 1.34
SLC43A1-201ENST00000278426 CHD1O14646 1710 aa23.41■■□□□ 1.34
SLC43A1-201ENST00000278426 ABCC2Q92887 1545 aa23.41■■□□□ 1.34
SLC43A1-201ENST00000278426 ZNF521Q96K83 1311 aa23.4■■□□□ 1.34
SLC43A1-201ENST00000278426 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
SLC43A1-201ENST00000278426 MADDQ8WXG6 1647 aa23.39■■□□□ 1.33
SLC43A1-201ENST00000278426 FRAT2O75474 233 aaPredicted RBP23.39■■□□□ 1.33
SLC43A1-201ENST00000278426 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
SLC43A1-201ENST00000278426 SLFN5Q08AF3 891 aa23.37■■□□□ 1.33
SLC43A1-201ENST00000278426 SPINK5Q9NQ38 1064 aaPredicted RBP23.36■■□□□ 1.33
SLC43A1-201ENST00000278426 SCAF11Q99590 1463 aaKnown RBP23.36■■□□□ 1.33
SLC43A1-201ENST00000278426 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
SLC43A1-201ENST00000278426 APAF1O14727 1248 aa23.35■■□□□ 1.33
SLC43A1-201ENST00000278426 ASXL1Q8IXJ9 1541 aa23.34■■□□□ 1.33
SLC43A1-201ENST00000278426 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
SLC43A1-201ENST00000278426 SHROOM2Q13796 1616 aa23.33■■□□□ 1.32
SLC43A1-201ENST00000278426 ABCC1P33527 1531 aa23.32■■□□□ 1.32
SLC43A1-201ENST00000278426 SYNMO15061 1565 aa23.31■■□□□ 1.32
SLC43A1-201ENST00000278426 BCAR3O75815 825 aa23.3■■□□□ 1.32
SLC43A1-201ENST00000278426 CFAP70Q5T0N1 1121 aa23.3■■□□□ 1.32
SLC43A1-201ENST00000278426 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
SLC43A1-201ENST00000278426 TRPM2O94759 1503 aa23.29■■□□□ 1.32
SLC43A1-201ENST00000278426 SCAPERQ9BY12 1400 aa23.29■■□□□ 1.32
SLC43A1-201ENST00000278426 CLTCL1P53675 1640 aa23.28■■□□□ 1.32
SLC43A1-201ENST00000278426 TRMT2AQ8IZ69 625 aaKnown RBP23.28■■□□□ 1.32
SLC43A1-201ENST00000278426 PTPRTO14522 1441 aa23.28■■□□□ 1.32
SLC43A1-201ENST00000278426 SPHKAPQ2M3C7 1700 aa23.28■■□□□ 1.32
SLC43A1-201ENST00000278426 DMRT2Q9Y5R5 561 aa23.27■■□□□ 1.32
SLC43A1-201ENST00000278426 STAC3Q96MF2 364 aa23.27■■□□□ 1.32
SLC43A1-201ENST00000278426 ZCCHC11Q5TAX3 1644 aaKnown RBP23.26■■□□□ 1.31
SLC43A1-201ENST00000278426 KIF3BO15066 747 aa23.26■■□□□ 1.31
SLC43A1-201ENST00000278426 CARD14Q9BXL6 1004 aa23.26■■□□□ 1.31
SLC43A1-201ENST00000278426 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
SLC43A1-201ENST00000278426 IGHDP01880 384 aa23.25■■□□□ 1.31
SLC43A1-201ENST00000278426 MYOM1P52179 1685 aa23.24■■□□□ 1.31
SLC43A1-201ENST00000278426 CEP152O94986 1710 aa23.24■■□□□ 1.31
SLC43A1-201ENST00000278426 NPC1L1Q9UHC9 1359 aa23.24■■□□□ 1.31
SLC43A1-201ENST00000278426 ADGRF5Q8IZF2 1346 aa23.23■■□□□ 1.31
SLC43A1-201ENST00000278426 USP19O94966 1318 aa23.23■■□□□ 1.31
SLC43A1-201ENST00000278426 NKTRP30414 1462 aaKnown RBP23.22■■□□□ 1.31
SLC43A1-201ENST00000278426 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
SLC43A1-201ENST00000278426 ZFYVE16Q7Z3T8 1539 aa23.21■■□□□ 1.31
SLC43A1-201ENST00000278426 RTEL1-TNFRSF6BF6WH68 1400 aa23.21■■□□□ 1.31
SLC43A1-201ENST00000278426 E9PSI1 815 aa23.2■■□□□ 1.3
SLC43A1-201ENST00000278426 SEC24BO95487 1268 aa23.2■■□□□ 1.3
SLC43A1-201ENST00000278426 KANK1Q14678 1352 aa23.2■■□□□ 1.3
SLC43A1-201ENST00000278426 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
SLC43A1-201ENST00000278426 KDM5AP29375 1690 aaKnown RBP23.18■■□□□ 1.3
SLC43A1-201ENST00000278426 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
SLC43A1-201ENST00000278426 TNNT2P45379 298 aaPredicted RBP23.16■■□□□ 1.3
SLC43A1-201ENST00000278426 NEUROD2Q15784 382 aa23.15■■□□□ 1.3
SLC43A1-201ENST00000278426 POGKQ9P215 609 aa23.15■■□□□ 1.3
SLC43A1-201ENST00000278426 TET3O43151 1660 aa23.15■■□□□ 1.3
SLC43A1-201ENST00000278426 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
SLC43A1-201ENST00000278426 VIRMAQ69YN4 1812 aaKnown RBP23.15■■□□□ 1.3
SLC43A1-201ENST00000278426 PANK1Q8TE04 598 aa23.14■■□□□ 1.29
SLC43A1-201ENST00000278426 WWC1Q8IX03 1113 aa23.13■■□□□ 1.29
SLC43A1-201ENST00000278426 COG6Q9Y2V7 657 aa23.13■■□□□ 1.29
SLC43A1-201ENST00000278426 DEPDC5O75140 1603 aa23.13■■□□□ 1.29
SLC43A1-201ENST00000278426 SLKQ9H2G2 1235 aaPredicted RBP23.12■■□□□ 1.29
SLC43A1-201ENST00000278426 UHRF1BP1LA0JNW5 1464 aa23.12■■□□□ 1.29
SLC43A1-201ENST00000278426 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
SLC43A1-201ENST00000278426 RRP7AQ9Y3A4 280 aaKnown RBP23.12■■□□□ 1.29
SLC43A1-201ENST00000278426 CHGAP10645 457 aaKnown RBP23.11■■□□□ 1.29
SLC43A1-201ENST00000278426 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
SLC43A1-201ENST00000278426 ATP7AQ04656 1500 aa23.1■■□□□ 1.29
SLC43A1-201ENST00000278426 SLC24A1O60721 1099 aa23.1■■□□□ 1.29
SLC43A1-201ENST00000278426 ABCA6Q8N139 1617 aa23.09■■□□□ 1.29
SLC43A1-201ENST00000278426 MAP3K4Q9Y6R4 1608 aa23.09■■□□□ 1.29
SLC43A1-201ENST00000278426 KIAA1210Q9ULL0 1709 aa23.09■■□□□ 1.29
SLC43A1-201ENST00000278426 CLUAP1Q96AJ1 413 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 FANCAO15360 1455 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 PDE3AQ14432 1141 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 FAM43AQ8N2R8 423 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 SLC12A5Q9H2X9 1139 aa23.08■■□□□ 1.29
SLC43A1-201ENST00000278426 CGNL1Q0VF96 1302 aa23.07■■□□□ 1.28
SLC43A1-201ENST00000278426 VWDEQ8N2E2 1590 aa23.07■■□□□ 1.28
SLC43A1-201ENST00000278426 NGEFQ8N5V2 710 aa23.05■■□□□ 1.28
SLC43A1-201ENST00000278426 POLR3AO14802 1390 aaPredicted RBP23.05■■□□□ 1.28
SLC43A1-201ENST00000278426 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
SLC43A1-201ENST00000278426 MYOM2P54296 1465 aa23.05■■□□□ 1.28
SLC43A1-201ENST00000278426 NSD3Q9BZ95 1437 aa23.04■■□□□ 1.28
SLC43A1-201ENST00000278426 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
SLC43A1-201ENST00000278426 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
SLC43A1-201ENST00000278426 BECN1Q14457 450 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms