RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 ADGRF5Q8IZF2 1346 aa30.7■■■□□ 2.5
CCDC7-201ENST00000277657 ERVK-7P63135 1459 aa30.69■■■□□ 2.5
CCDC7-201ENST00000277657 CHGAP10645 457 aaKnown RBP30.69■■■□□ 2.5
CCDC7-201ENST00000277657 IDI1Q13907 227 aa30.67■■■□□ 2.5
CCDC7-201ENST00000277657 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
CCDC7-201ENST00000277657 CCER2I3L3R5 266 aa30.64■■■□□ 2.5
CCDC7-201ENST00000277657 SCAF11Q99590 1463 aaKnown RBP30.64■■■□□ 2.49
CCDC7-201ENST00000277657 TESK2Q96S53 571 aa30.63■■■□□ 2.49
CCDC7-201ENST00000277657 FBXO31Q5XUX0 539 aaPredicted RBP30.62■■■□□ 2.49
CCDC7-201ENST00000277657 YTHDC1Q96MU7 727 aaKnown RBP30.62■■■□□ 2.49
CCDC7-201ENST00000277657 SPATA31D1Q6ZQQ2 1576 aa30.62■■■□□ 2.49
CCDC7-201ENST00000277657 NEXMIFQ5QGS0 1516 aa30.62■■■□□ 2.49
CCDC7-201ENST00000277657 TMEM131LA2VDJ0 1609 aa30.61■■■□□ 2.49
CCDC7-201ENST00000277657 MLECQ14165 292 aa30.61■■■□□ 2.49
CCDC7-201ENST00000277657 PIK3C2GO75747 1445 aa30.61■■■□□ 2.49
CCDC7-201ENST00000277657 CENPBP07199 599 aaPredicted RBP30.59■■■□□ 2.49
CCDC7-201ENST00000277657 CFAP70Q5T0N1 1121 aa30.59■■■□□ 2.49
CCDC7-201ENST00000277657 SETBP1Q9Y6X0 1596 aa30.57■■■□□ 2.48
CCDC7-201ENST00000277657 MYO5BQ9ULV0 1848 aa30.56■■■□□ 2.48
CCDC7-201ENST00000277657 ZFYVE9O95405 1425 aa30.54■■■□□ 2.48
CCDC7-201ENST00000277657 POLR3GLQ9BT43 218 aa30.53■■■□□ 2.48
CCDC7-201ENST00000277657 VGFO15240 615 aaPredicted RBP30.52■■■□□ 2.48
CCDC7-201ENST00000277657 ZMYM3Q14202 1370 aa30.52■■■□□ 2.48
CCDC7-201ENST00000277657 C14orf93Q9H972 538 aaKnown RBP30.52■■■□□ 2.48
CCDC7-201ENST00000277657 EIF3AQ14152 1382 aaKnown RBP30.51■■■□□ 2.48
CCDC7-201ENST00000277657 DISP3Q9P2K9 1392 aa30.51■■■□□ 2.48
CCDC7-201ENST00000277657 ESF1Q9H501 851 aaKnown RBP30.5■■■□□ 2.47
CCDC7-201ENST00000277657 TMF1P82094 1093 aa30.48■■■□□ 2.47
CCDC7-201ENST00000277657 ADGRB1O14514 1584 aa30.47■■■□□ 2.47
CCDC7-201ENST00000277657 PRKRIP1Q9H875 184 aaPredicted RBP30.47■■■□□ 2.47
CCDC7-201ENST00000277657 MYO3AQ8NEV4 1616 aa30.44■■■□□ 2.46
CCDC7-201ENST00000277657 A2ML1A8K2U0 1454 aa30.41■■■□□ 2.46
CCDC7-201ENST00000277657 NUTM2DQ5VT03 806 aaPredicted RBP30.39■■■□□ 2.46
CCDC7-201ENST00000277657 SLC24A1O60721 1099 aa30.37■■■□□ 2.45
CCDC7-201ENST00000277657 STAG3Q9UJ98 1225 aa30.36■■■□□ 2.45
CCDC7-201ENST00000277657 SBNO2Q9Y2G9 1366 aa30.36■■■□□ 2.45
CCDC7-201ENST00000277657 CDCA8Q53HL2 280 aa30.34■■■□□ 2.45
CCDC7-201ENST00000277657 TNRQ92752 1358 aa30.34■■■□□ 2.45
CCDC7-201ENST00000277657 KDM5AP29375 1690 aaKnown RBP30.32■■■□□ 2.44
CCDC7-201ENST00000277657 TMEM132EQ6IEE7 984 aa30.31■■■□□ 2.44
CCDC7-201ENST00000277657 ASXL1Q8IXJ9 1541 aa30.29■■■□□ 2.44
CCDC7-201ENST00000277657 CENPJQ9HC77 1338 aaPredicted RBP30.28■■■□□ 2.44
CCDC7-201ENST00000277657 RIMS2Q9UQ26 1411 aa30.28■■■□□ 2.44
CCDC7-201ENST00000277657 FER1L4A9Z1Z3 1794 aa30.28■■■□□ 2.44
CCDC7-201ENST00000277657 PER1O15534 1290 aaPredicted RBP30.27■■■□□ 2.44
CCDC7-201ENST00000277657 TRAK1Q9UPV9 953 aa30.27■■■□□ 2.44
CCDC7-201ENST00000277657 ARHGEF28Q8N1W1 1705 aaKnown RBP30.26■■■□□ 2.43
CCDC7-201ENST00000277657 QRICH2Q9H0J4 1663 aa30.25■■■□□ 2.43
CCDC7-201ENST00000277657 KTN1Q86UP2 1357 aaKnown RBP30.25■■■□□ 2.43
CCDC7-201ENST00000277657 C3P01024 1663 aa30.25■■■□□ 2.43
CCDC7-201ENST00000277657 ALKQ9UM73 1620 aa30.24■■■□□ 2.43
CCDC7-201ENST00000277657 MYOM1P52179 1685 aa30.23■■■□□ 2.43
CCDC7-201ENST00000277657 CCDC184Q52MB2 194 aa30.23■■■□□ 2.43
CCDC7-201ENST00000277657 UBR1Q8IWV7 1749 aa30.22■■■□□ 2.43
CCDC7-201ENST00000277657 PANK3Q9H999 370 aa30.22■■■□□ 2.43
CCDC7-201ENST00000277657 NLRP1Q9C000 1473 aa30.21■■■□□ 2.43
CCDC7-201ENST00000277657 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.19■■■□□ 2.42
CCDC7-201ENST00000277657 RALBP1Q15311 655 aa30.17■■■□□ 2.42
CCDC7-201ENST00000277657 SETD1AO15047 1707 aaKnown RBP30.16■■■□□ 2.42
CCDC7-201ENST00000277657 CEBPAP49715 358 aaPredicted RBP30.16■■■□□ 2.42
CCDC7-201ENST00000277657 MRS2Q9HD23 443 aa30.16■■■□□ 2.42
CCDC7-201ENST00000277657 YTHDC2Q9H6S0 1430 aaKnown RBP30.15■■■□□ 2.42
CCDC7-201ENST00000277657 PARD3Q8TEW0 1356 aa30.14■■■□□ 2.42
CCDC7-201ENST00000277657 PTPRMP28827 1452 aa30.14■■■□□ 2.41
CCDC7-201ENST00000277657 NRXN3Q9Y4C0 1643 aa30.13■■■□□ 2.41
CCDC7-201ENST00000277657 TMEM2Q9UHN6 1383 aa30.13■■■□□ 2.41
CCDC7-201ENST00000277657 HDGFP51858 240 aaKnown RBP30.12■■■□□ 2.41
CCDC7-201ENST00000277657 CNGB1Q14028 1251 aaPredicted RBP30.11■■■□□ 2.41
CCDC7-201ENST00000277657 SENP3Q9H4L4 574 aaPredicted RBP30.1■■■□□ 2.41
CCDC7-201ENST00000277657 MYBBP1AQ9BQG0 1328 aaKnown RBP30.09■■■□□ 2.41
CCDC7-201ENST00000277657 PUS7Q96PZ0 661 aaKnown RBP30.08■■■□□ 2.41
CCDC7-201ENST00000277657 STK26Q9P289 416 aa30.07■■■□□ 2.4
CCDC7-201ENST00000277657 TULP4Q9NRJ4 1543 aa30.06■■■□□ 2.4
CCDC7-201ENST00000277657 DLC1Q96QB1 1528 aa30.05■■■□□ 2.4
CCDC7-201ENST00000277657 BRD4O60885 1362 aaPredicted RBP30.04■■■□□ 2.4
CCDC7-201ENST00000277657 LRPPRCP42704 1394 aaKnown RBP30.04■■■□□ 2.4
CCDC7-201ENST00000277657 SCAF1Q9H7N4 1312 aaKnown RBP30.03■■■□□ 2.4
CCDC7-201ENST00000277657 KNSTRNQ9Y448 316 aa30.03■■■□□ 2.4
CCDC7-201ENST00000277657 EVC2Q86UK5 1308 aa30.03■■■□□ 2.4
CCDC7-201ENST00000277657 ADAMTSL3P82987 1691 aa30.01■■■□□ 2.39
CCDC7-201ENST00000277657 AMER1Q5JTC6 1135 aaPredicted RBP30.01■■■□□ 2.39
CCDC7-201ENST00000277657 NPC1L1Q9UHC9 1359 aa30.01■■■□□ 2.39
CCDC7-201ENST00000277657 SLIT1O75093 1534 aa30■■■□□ 2.39
CCDC7-201ENST00000277657 RIMS1Q86UR5 1692 aaKnown RBP30■■■□□ 2.39
CCDC7-201ENST00000277657 ARHGAP23Q9P227 1491 aa30■■■□□ 2.39
CCDC7-201ENST00000277657 ABCC11Q96J66 1382 aa30■■■□□ 2.39
CCDC7-201ENST00000277657 CC2D1BQ5T0F9 858 aaKnown RBP29.99■■■□□ 2.39
CCDC7-201ENST00000277657 PRAM1Q96QH2 718 aa29.99■■■□□ 2.39
CCDC7-201ENST00000277657 FAM9BQ8IZU0 186 aa29.98■■■□□ 2.39
CCDC7-201ENST00000277657 NLRP13Q86W25 1043 aa29.97■■■□□ 2.39
CCDC7-201ENST00000277657 METP08581 1390 aa29.97■■■□□ 2.39
CCDC7-201ENST00000277657 TMC1Q8TDI8 760 aa29.97■■■□□ 2.39
CCDC7-201ENST00000277657 PLEKHG1Q9ULL1 1385 aa29.96■■■□□ 2.39
CCDC7-201ENST00000277657 POGKQ9P215 609 aa29.95■■■□□ 2.39
CCDC7-201ENST00000277657 LTKP29376 864 aa29.95■■■□□ 2.38
CCDC7-201ENST00000277657 HNRNPUQ00839 825 aaKnown RBP eCLIP29.95■■■□□ 2.38
CCDC7-201ENST00000277657 SAFB2Q14151 953 aaKnown RBP eCLIP29.95■■■□□ 2.38
CCDC7-201ENST00000277657 PNISRQ8TF01 805 aaKnown RBP29.94■■■□□ 2.38
CCDC7-201ENST00000277657 KNDC1Q76NI1 1749 aa29.94■■■□□ 2.38
CCDC7-201ENST00000277657 ADAMTS13Q76LX8 1427 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms