RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 PPP2R1AP30153 589 aa11.77□□□□□ -0.52
SEC16A-201ENST00000277537 SLC52A1Q9NWF4 448 aa11.77□□□□□ -0.52
SEC16A-201ENST00000277537 ARHGEF5Q12774 1597 aa11.77□□□□□ -0.53
SEC16A-201ENST00000277537 MYO5CQ9NQX4 1742 aa11.77□□□□□ -0.53
SEC16A-201ENST00000277537 PRAM1Q96QH2 718 aa11.77□□□□□ -0.53
SEC16A-201ENST00000277537 TERF2IPQ9NYB0 399 aa11.77□□□□□ -0.53
SEC16A-201ENST00000277537 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.53
SEC16A-201ENST00000277537 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.53
SEC16A-201ENST00000277537 TESK2Q96S53 571 aa11.77□□□□□ -0.53
SEC16A-201ENST00000277537 NOS1P29475 1434 aa11.76□□□□□ -0.53
SEC16A-201ENST00000277537 GGNBP2Q9H3C7 697 aa11.76□□□□□ -0.53
SEC16A-201ENST00000277537 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
SEC16A-201ENST00000277537 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
SEC16A-201ENST00000277537 CFAP65Q6ZU64 1925 aaKnown RBP11.75□□□□□ -0.53
SEC16A-201ENST00000277537 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
SEC16A-201ENST00000277537 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
SEC16A-201ENST00000277537 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
SEC16A-201ENST00000277537 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
SEC16A-201ENST00000277537 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
SEC16A-201ENST00000277537 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
SEC16A-201ENST00000277537 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
SEC16A-201ENST00000277537 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
SEC16A-201ENST00000277537 ANP32AP39687 249 aaKnown RBP11.72□□□□□ -0.53
SEC16A-201ENST00000277537 MTHFSP49914 203 aa11.72□□□□□ -0.53
SEC16A-201ENST00000277537 PDE3BQ13370 1112 aa11.72□□□□□ -0.53
SEC16A-201ENST00000277537 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
SEC16A-201ENST00000277537 CEBPAP49715 358 aaPredicted RBP11.71□□□□□ -0.53
SEC16A-201ENST00000277537 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
SEC16A-201ENST00000277537 UHRF1BP1Q6BDS2 1440 aa11.71□□□□□ -0.53
SEC16A-201ENST00000277537 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.54
SEC16A-201ENST00000277537 PLA2R1Q13018 1463 aa11.71□□□□□ -0.54
SEC16A-201ENST00000277537 NBR1Q14596 966 aa11.7□□□□□ -0.54
SEC16A-201ENST00000277537 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
SEC16A-201ENST00000277537 RPGRIP1LQ68CZ1 1315 aa11.7□□□□□ -0.54
SEC16A-201ENST00000277537 ABCC1P33527 1531 aa11.7□□□□□ -0.54
SEC16A-201ENST00000277537 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
SEC16A-201ENST00000277537 SCAF11Q99590 1463 aaKnown RBP11.7□□□□□ -0.54
SEC16A-201ENST00000277537 C14orf93Q9H972 538 aaKnown RBP11.69□□□□□ -0.54
SEC16A-201ENST00000277537 RGS3P49796 1198 aa11.69□□□□□ -0.54
SEC16A-201ENST00000277537 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
SEC16A-201ENST00000277537 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
SEC16A-201ENST00000277537 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
SEC16A-201ENST00000277537 BCL2L13Q9BXK5 485 aa11.68□□□□□ -0.54
SEC16A-201ENST00000277537 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
SEC16A-201ENST00000277537 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
SEC16A-201ENST00000277537 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
SEC16A-201ENST00000277537 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
SEC16A-201ENST00000277537 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
SEC16A-201ENST00000277537 FTSJ3Q8IY81 847 aaKnown RBP11.67□□□□□ -0.54
SEC16A-201ENST00000277537 CLUAP1Q96AJ1 413 aa11.67□□□□□ -0.54
SEC16A-201ENST00000277537 NGDNQ8NEJ9 315 aaKnown RBP11.66□□□□□ -0.54
SEC16A-201ENST00000277537 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
SEC16A-201ENST00000277537 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.66□□□□□ -0.54
SEC16A-201ENST00000277537 SHROOM2Q13796 1616 aa11.65□□□□□ -0.54
SEC16A-201ENST00000277537 UGGT1Q9NYU2 1555 aa11.65□□□□□ -0.54
SEC16A-201ENST00000277537 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
SEC16A-201ENST00000277537 ATP10AO60312 1499 aa11.65□□□□□ -0.54
SEC16A-201ENST00000277537 NSD3Q9BZ95 1437 aa11.64□□□□□ -0.55
SEC16A-201ENST00000277537 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
SEC16A-201ENST00000277537 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
SEC16A-201ENST00000277537 CRBNQ96SW2 442 aa11.64□□□□□ -0.55
SEC16A-201ENST00000277537 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
SEC16A-201ENST00000277537 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
SEC16A-201ENST00000277537 NPATQ14207 1427 aa11.63□□□□□ -0.55
SEC16A-201ENST00000277537 HMOX1P09601 288 aa11.62□□□□□ -0.55
SEC16A-201ENST00000277537 COG3Q96JB2 828 aa11.62□□□□□ -0.55
SEC16A-201ENST00000277537 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
SEC16A-201ENST00000277537 ZFYVE16Q7Z3T8 1539 aa11.62□□□□□ -0.55
SEC16A-201ENST00000277537 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
SEC16A-201ENST00000277537 PNNQ9H307 717 aaKnown RBP11.61□□□□□ -0.55
SEC16A-201ENST00000277537 DIAPH1O60610 1272 aaKnown RBP11.61□□□□□ -0.55
SEC16A-201ENST00000277537 FBLN1P23142 703 aa11.61□□□□□ -0.55
SEC16A-201ENST00000277537 E9PSI1 815 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 LTV1Q96GA3 475 aaPredicted RBP11.6□□□□□ -0.55
SEC16A-201ENST00000277537 GPRASP1Q5JY77 1395 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 NUTM2GQ5VZR2 741 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
SEC16A-201ENST00000277537 PARD3Q8TEW0 1356 aa11.59□□□□□ -0.55
SEC16A-201ENST00000277537 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
SEC16A-201ENST00000277537 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
SEC16A-201ENST00000277537 COL17A1Q9UMD9 1497 aaPredicted RBP11.59□□□□□ -0.55
SEC16A-201ENST00000277537 KDM5CP41229 1560 aa11.58□□□□□ -0.56
SEC16A-201ENST00000277537 RIPK4P57078 832 aa11.58□□□□□ -0.56
SEC16A-201ENST00000277537 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
SEC16A-201ENST00000277537 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
SEC16A-201ENST00000277537 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
SEC16A-201ENST00000277537 TCERG1O14776 1098 aaKnown RBP11.57□□□□□ -0.56
SEC16A-201ENST00000277537 PLXNC1O60486 1568 aa11.57□□□□□ -0.56
SEC16A-201ENST00000277537 NEO1Q92859 1461 aa11.57□□□□□ -0.56
SEC16A-201ENST00000277537 BCAR3O75815 825 aa11.56□□□□□ -0.56
SEC16A-201ENST00000277537 AMPHP49418 695 aa11.56□□□□□ -0.56
SEC16A-201ENST00000277537 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
SEC16A-201ENST00000277537 RRS1Q15050 365 aaKnown RBP11.55□□□□□ -0.56
SEC16A-201ENST00000277537 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
SEC16A-201ENST00000277537 PRDM15P57071 1507 aaPredicted RBP11.55□□□□□ -0.56
SEC16A-201ENST00000277537 TSPOAP1O95153 1857 aa11.55□□□□□ -0.56
SEC16A-201ENST00000277537 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms