RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 C14orf37Q86TY3 774 aa19.38■□□□□ 0.69
MRPS28-201ENST00000276585 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
MRPS28-201ENST00000276585 MYOM3Q5VTT5 1437 aa19.37■□□□□ 0.69
MRPS28-201ENST00000276585 QTRT2Q9H974 415 aaKnown RBP19.37■□□□□ 0.69
MRPS28-201ENST00000276585 ATAD2Q6PL18 1390 aa19.36■□□□□ 0.69
MRPS28-201ENST00000276585 TET3O43151 1660 aa19.36■□□□□ 0.69
MRPS28-201ENST00000276585 KDM5AP29375 1690 aaKnown RBP19.36■□□□□ 0.69
MRPS28-201ENST00000276585 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
MRPS28-201ENST00000276585 MROH1Q8NDA8 1641 aa19.35■□□□□ 0.69
MRPS28-201ENST00000276585 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
MRPS28-201ENST00000276585 EFCAB6Q5THR3 1501 aa19.35■□□□□ 0.69
MRPS28-201ENST00000276585 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.69
MRPS28-201ENST00000276585 C8orf37Q96NL8 207 aa19.33■□□□□ 0.68
MRPS28-201ENST00000276585 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.68
MRPS28-201ENST00000276585 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
MRPS28-201ENST00000276585 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
MRPS28-201ENST00000276585 ATF3P18847 181 aa19.3■□□□□ 0.68
MRPS28-201ENST00000276585 CADPS2Q86UW7 1296 aa19.3■□□□□ 0.68
MRPS28-201ENST00000276585 NGLY1Q96IV0 654 aa19.3■□□□□ 0.68
MRPS28-201ENST00000276585 IDI1Q13907 227 aa19.28■□□□□ 0.68
MRPS28-201ENST00000276585 DIP2AQ14689 1571 aa19.27■□□□□ 0.68
MRPS28-201ENST00000276585 NCOA3Q9Y6Q9 1424 aa19.25■□□□□ 0.67
MRPS28-201ENST00000276585 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
MRPS28-201ENST00000276585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.671e-8■■■□□ 15.2
MRPS28-201ENST00000276585 C19orf44Q9H6X5 657 aa19.24■□□□□ 0.67
MRPS28-201ENST00000276585 CHD2O14647 1828 aaKnown RBP19.23■□□□□ 0.67
MRPS28-201ENST00000276585 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
MRPS28-201ENST00000276585 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.22■□□□□ 0.67
MRPS28-201ENST00000276585 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
MRPS28-201ENST00000276585 DUOX2Q9NRD8 1548 aa19.2■□□□□ 0.66
MRPS28-201ENST00000276585 ABCC5O15440 1437 aa19.2■□□□□ 0.66
MRPS28-201ENST00000276585 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
MRPS28-201ENST00000276585 APLP2Q06481 763 aa19.2■□□□□ 0.66
MRPS28-201ENST00000276585 ADAMTS2O95450 1211 aa19.19■□□□□ 0.66
MRPS28-201ENST00000276585 CCDC125Q86Z20 511 aa19.19■□□□□ 0.66
MRPS28-201ENST00000276585 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
MRPS28-201ENST00000276585 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
MRPS28-201ENST00000276585 KANK1Q14678 1352 aa19.18■□□□□ 0.66
MRPS28-201ENST00000276585 DAPK1P53355 1430 aa19.17■□□□□ 0.66
MRPS28-201ENST00000276585 ASXL1Q8IXJ9 1541 aa19.16■□□□□ 0.66
MRPS28-201ENST00000276585 EP400Q96L91 3159 aa19.16■□□□□ 0.66
MRPS28-201ENST00000276585 USP21Q9UK80 565 aa19.15■□□□□ 0.66
MRPS28-201ENST00000276585 TRPC5Q9UL62 973 aaPredicted RBP19.15■□□□□ 0.66
MRPS28-201ENST00000276585 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
MRPS28-201ENST00000276585 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
MRPS28-201ENST00000276585 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
MRPS28-201ENST00000276585 KIF15Q9NS87 1388 aa19.13■□□□□ 0.65
MRPS28-201ENST00000276585 SLC52A1Q9NWF4 448 aa19.12■□□□□ 0.65
MRPS28-201ENST00000276585 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
MRPS28-201ENST00000276585 ERBINQ96RT1 1412 aa19.11■□□□□ 0.65
MRPS28-201ENST00000276585 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
MRPS28-201ENST00000276585 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
MRPS28-201ENST00000276585 RRP7BPQ9NSQ0 103 aa19.1■□□□□ 0.65
MRPS28-201ENST00000276585 NHSL1Q5SYE7 1610 aa19.1■□□□□ 0.65
MRPS28-201ENST00000276585 NOS1P29475 1434 aa19.09■□□□□ 0.65
MRPS28-201ENST00000276585 LRP5O75197 1615 aa19.08■□□□□ 0.65
MRPS28-201ENST00000276585 ADGRL2O95490 1459 aa19.08■□□□□ 0.64
MRPS28-201ENST00000276585 DCCP43146 1447 aa19.08■□□□□ 0.64
MRPS28-201ENST00000276585 ATRNO75882 1429 aa19.06■□□□□ 0.64
MRPS28-201ENST00000276585 LMTK2Q8IWU2 1503 aa19.05■□□□□ 0.64
MRPS28-201ENST00000276585 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
MRPS28-201ENST00000276585 AMOTL2Q9Y2J4 779 aa19.05■□□□□ 0.64
MRPS28-201ENST00000276585 MST1RQ04912 1400 aa19.05■□□□□ 0.64
MRPS28-201ENST00000276585 PIK3R4Q99570 1358 aa19.05■□□□□ 0.64
MRPS28-201ENST00000276585 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
MRPS28-201ENST00000276585 BLMP54132 1417 aaPredicted RBP19.03■□□□□ 0.64
MRPS28-201ENST00000276585 DEFB132Q7Z7B7 95 aa19.03■□□□□ 0.64
MRPS28-201ENST00000276585 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
MRPS28-201ENST00000276585 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
MRPS28-201ENST00000276585 FNBP4Q8N3X1 1017 aaPredicted RBP19.02■□□□□ 0.64
MRPS28-201ENST00000276585 MYO5BQ9ULV0 1848 aa19.01■□□□□ 0.63
MRPS28-201ENST00000276585 GCC2Q8IWJ2 1684 aa19■□□□□ 0.63
MRPS28-201ENST00000276585 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
MRPS28-201ENST00000276585 TRPM2O94759 1503 aa18.99■□□□□ 0.63
MRPS28-201ENST00000276585 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
MRPS28-201ENST00000276585 PSDA5PKW4 1024 aaPredicted RBP18.98■□□□□ 0.63
MRPS28-201ENST00000276585 PTPRUQ92729 1446 aa18.98■□□□□ 0.63
MRPS28-201ENST00000276585 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
MRPS28-201ENST00000276585 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
MRPS28-201ENST00000276585 YY1P25490 414 aa18.95■□□□□ 0.62
MRPS28-201ENST00000276585 GJD4Q96KN9 370 aaPredicted RBP18.95■□□□□ 0.62
MRPS28-201ENST00000276585 TMEM131LA2VDJ0 1609 aa18.95■□□□□ 0.62
MRPS28-201ENST00000276585 HRCP23327 699 aa18.94■□□□□ 0.62
MRPS28-201ENST00000276585 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
MRPS28-201ENST00000276585 UNC13BO14795 1591 aa18.93■□□□□ 0.62
MRPS28-201ENST00000276585 RPRD2Q5VT52 1461 aaKnown RBP18.91■□□□□ 0.62
MRPS28-201ENST00000276585 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
MRPS28-201ENST00000276585 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
MRPS28-201ENST00000276585 SOS2Q07890 1332 aaPredicted RBP18.89■□□□□ 0.61
MRPS28-201ENST00000276585 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
MRPS28-201ENST00000276585 ROCK1Q13464 1354 aa18.88■□□□□ 0.61
MRPS28-201ENST00000276585 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
MRPS28-201ENST00000276585 XRN1Q8IZH2 1706 aaKnown RBP18.87■□□□□ 0.61
MRPS28-201ENST00000276585 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
MRPS28-201ENST00000276585 BAG6P46379 1132 aa18.84■□□□□ 0.61
MRPS28-201ENST00000276585 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
MRPS28-201ENST00000276585 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
MRPS28-201ENST00000276585 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
MRPS28-201ENST00000276585 MYOM2P54296 1465 aa18.83■□□□□ 0.6
MRPS28-201ENST00000276585 LAMC1P11047 1609 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms