RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
SKP2-202ENST00000274255 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
SKP2-202ENST00000274255 PER1O15534 1290 aaPredicted RBP14.36□□□□□ -0.11
SKP2-202ENST00000274255 PCDHB15Q9Y5E8 787 aa14.36□□□□□ -0.11
SKP2-202ENST00000274255 TRAK2O60296 914 aa14.36□□□□□ -0.11
SKP2-202ENST00000274255 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
SKP2-202ENST00000274255 C14orf37Q86TY3 774 aa14.36□□□□□ -0.11
SKP2-202ENST00000274255 DZIP1LQ8IYY4 767 aaKnown RBP14.36□□□□□ -0.11
SKP2-202ENST00000274255 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
SKP2-202ENST00000274255 CARMIL2Q6F5E8 1435 aa14.35□□□□□ -0.11
SKP2-202ENST00000274255 RLBP1P12271 317 aa14.35□□□□□ -0.11
SKP2-202ENST00000274255 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
SKP2-202ENST00000274255 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
SKP2-202ENST00000274255 WWC1Q8IX03 1113 aa14.35□□□□□ -0.11
SKP2-202ENST00000274255 NECTIN2Q92692 538 aa14.35□□□□□ -0.11
SKP2-202ENST00000274255 C9orf84Q5VXU9 1444 aa14.35□□□□□ -0.11
SKP2-202ENST00000274255 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
SKP2-202ENST00000274255 TBC1D2Q9BYX2 928 aa14.34□□□□□ -0.11
SKP2-202ENST00000274255 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
SKP2-202ENST00000274255 RIPK4P57078 832 aa14.34□□□□□ -0.11
SKP2-202ENST00000274255 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
SKP2-202ENST00000274255 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
SKP2-202ENST00000274255 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
SKP2-202ENST00000274255 MIA2Q96PC5 1412 aa14.33□□□□□ -0.12
SKP2-202ENST00000274255 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
SKP2-202ENST00000274255 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
SKP2-202ENST00000274255 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
SKP2-202ENST00000274255 PTPRGP23470 1445 aa14.31□□□□□ -0.12
SKP2-202ENST00000274255 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
SKP2-202ENST00000274255 TESK2Q96S53 571 aa14.31□□□□□ -0.12
SKP2-202ENST00000274255 ERBINQ96RT1 1412 aa14.31□□□□□ -0.12
SKP2-202ENST00000274255 RNF214Q8ND24 703 aa14.31□□□□□ -0.12
SKP2-202ENST00000274255 RNF123Q5XPI4 1314 aa14.31□□□□□ -0.12
SKP2-202ENST00000274255 MAGI3Q5TCQ9 1506 aa14.3□□□□□ -0.12
SKP2-202ENST00000274255 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
SKP2-202ENST00000274255 RSPH6AQ9H0K4 717 aa14.3□□□□□ -0.12
SKP2-202ENST00000274255 NOB1Q9ULX3 412 aaKnown RBP14.3□□□□□ -0.12
SKP2-202ENST00000274255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.3□□□□□ -0.12
SKP2-202ENST00000274255 MSNP26038 577 aaKnown RBP14.3□□□□□ -0.12
SKP2-202ENST00000274255 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
SKP2-202ENST00000274255 FAM13BQ9NYF5 915 aa14.28□□□□□ -0.12
SKP2-202ENST00000274255 CHMP5Q9NZZ3 219 aa14.28□□□□□ -0.12
SKP2-202ENST00000274255 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
SKP2-202ENST00000274255 MCM4P33991 863 aa14.28□□□□□ -0.12
SKP2-202ENST00000274255 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.12
SKP2-202ENST00000274255 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
SKP2-202ENST00000274255 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
SKP2-202ENST00000274255 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
SKP2-202ENST00000274255 RARSP54136 660 aaKnown RBP14.27□□□□□ -0.13
SKP2-202ENST00000274255 GBP4Q96PP9 640 aa14.27□□□□□ -0.13
SKP2-202ENST00000274255 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.13
SKP2-202ENST00000274255 MCTP1Q6DN14 999 aa14.27□□□□□ -0.13
SKP2-202ENST00000274255 RRAGDQ9NQL2 400 aaPredicted RBP14.27□□□□□ -0.13
SKP2-202ENST00000274255 CAMSAP2Q08AD1 1489 aa14.26□□□□□ -0.13
SKP2-202ENST00000274255 SPATA31E1Q6ZUB1 1445 aa14.26□□□□□ -0.13
SKP2-202ENST00000274255 DTNBO60941 627 aa14.26□□□□□ -0.13
SKP2-202ENST00000274255 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
SKP2-202ENST00000274255 WASHC2CQ9Y4E1 1318 aa14.25□□□□□ -0.13
SKP2-202ENST00000274255 TMEM57Q8N5G2 664 aa14.25□□□□□ -0.13
SKP2-202ENST00000274255 IPO8O15397 1037 aaKnown RBP14.24□□□□□ -0.13
SKP2-202ENST00000274255 XRCC6P12956 609 aaKnown RBP eCLIP14.24□□□□□ -0.13
SKP2-202ENST00000274255 UGGT2Q9NYU1 1516 aa14.24□□□□□ -0.13
SKP2-202ENST00000274255 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
SKP2-202ENST00000274255 SSH1Q8WYL5 1049 aa14.24□□□□□ -0.13
SKP2-202ENST00000274255 CHMP3Q9Y3E7 222 aa14.24□□□□□ -0.13
SKP2-202ENST00000274255 DENND4BO75064 1496 aaPredicted RBP14.24□□□□□ -0.13
SKP2-202ENST00000274255 ROCK1Q13464 1354 aa14.23□□□□□ -0.13
SKP2-202ENST00000274255 TRIM6-TRIM34B2RNG4 842 aa14.23□□□□□ -0.13
SKP2-202ENST00000274255 TEX14Q8IWB6 1497 aa14.23□□□□□ -0.13
SKP2-202ENST00000274255 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
SKP2-202ENST00000274255 CARD14Q9BXL6 1004 aa14.23□□□□□ -0.13
SKP2-202ENST00000274255 PDE3AQ14432 1141 aa14.23□□□□□ -0.13
SKP2-202ENST00000274255 CAVIN1Q6NZI2 390 aaKnown RBP14.23□□□□□ -0.13
SKP2-202ENST00000274255 KANK1Q14678 1352 aa14.22□□□□□ -0.13
SKP2-202ENST00000274255 FAM43AQ8N2R8 423 aa14.22□□□□□ -0.13
SKP2-202ENST00000274255 LTV1Q96GA3 475 aaPredicted RBP14.21□□□□□ -0.13
SKP2-202ENST00000274255 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
SKP2-202ENST00000274255 LRPPRCP42704 1394 aaKnown RBP14.21□□□□□ -0.13
SKP2-202ENST00000274255 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
SKP2-202ENST00000274255 PZPP20742 1482 aa14.21□□□□□ -0.13
SKP2-202ENST00000274255 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.13
SKP2-202ENST00000274255 RILPL2Q969X0 211 aa14.21□□□□□ -0.13
SKP2-202ENST00000274255 MVPQ14764 893 aaKnown RBP14.2□□□□□ -0.14
SKP2-202ENST00000274255 R3HCC1Q9Y3T6 440 aaKnown RBP14.2□□□□□ -0.14
SKP2-202ENST00000274255 DDX19BQ9UMR2 479 aa14.2□□□□□ -0.14
SKP2-202ENST00000274255 KDM2BQ8NHM5 1336 aa14.19□□□□□ -0.14
SKP2-202ENST00000274255 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
SKP2-202ENST00000274255 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
SKP2-202ENST00000274255 PLEKHH2Q8IVE3 1493 aa14.19□□□□□ -0.14
SKP2-202ENST00000274255 TRIM27P14373 513 aa14.19□□□□□ -0.14
SKP2-202ENST00000274255 RSPH4AQ5TD94 716 aa14.18□□□□□ -0.14
SKP2-202ENST00000274255 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
SKP2-202ENST00000274255 GPATCH8Q9UKJ3 1502 aaKnown RBP14.18□□□□□ -0.14
SKP2-202ENST00000274255 SMARCA5O60264 1052 aaPredicted RBP14.18□□□□□ -0.14
SKP2-202ENST00000274255 PRPF40AO75400 957 aaKnown RBP14.18□□□□□ -0.14
SKP2-202ENST00000274255 CHAMP1Q96JM3 812 aa14.18□□□□□ -0.14
SKP2-202ENST00000274255 MIS18AQ9NYP9 233 aa14.18□□□□□ -0.14
SKP2-202ENST00000274255 SSFA2P28290 1259 aa14.17□□□□□ -0.14
SKP2-202ENST00000274255 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
SKP2-202ENST00000274255 LARP6Q9BRS8 491 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms