RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 AMER1Q5JTC6 1135 aaPredicted RBP31.06■■■□□ 2.56
RETREG2-201ENST00000273048 RNF17Q9BXT8 1623 aaKnown RBP31.04■■■□□ 2.56
RETREG2-201ENST00000273048 FAM161AQ3B820 660 aa31.04■■■□□ 2.56
RETREG2-201ENST00000273048 RGS3P49796 1198 aa31.02■■■□□ 2.56
RETREG2-201ENST00000273048 CCDC146Q8IYE0 955 aa31.02■■■□□ 2.56
RETREG2-201ENST00000273048 DAXXQ9UER7 740 aaPredicted RBP31.02■■■□□ 2.56
RETREG2-201ENST00000273048 ATP10AO60312 1499 aa31.01■■■□□ 2.55
RETREG2-201ENST00000273048 PLXNC1O60486 1568 aa30.99■■■□□ 2.55
RETREG2-201ENST00000273048 GSE1Q14687 1217 aa30.99■■■□□ 2.55
RETREG2-201ENST00000273048 SLFN5Q08AF3 891 aa30.98■■■□□ 2.55
RETREG2-201ENST00000273048 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.98■■■□□ 2.55
RETREG2-201ENST00000273048 SPINK5Q9NQ38 1064 aaPredicted RBP30.97■■■□□ 2.55
RETREG2-201ENST00000273048 DUOX2Q9NRD8 1548 aa30.95■■■□□ 2.55
RETREG2-201ENST00000273048 BRPF3Q9ULD4 1205 aa30.94■■■□□ 2.54
RETREG2-201ENST00000273048 ZCCHC11Q5TAX3 1644 aaKnown RBP30.93■■■□□ 2.54
RETREG2-201ENST00000273048 MADDQ8WXG6 1647 aa30.92■■■□□ 2.54
RETREG2-201ENST00000273048 IQGAP1P46940 1657 aa30.92■■■□□ 2.54
RETREG2-201ENST00000273048 BCAR3O75815 825 aa30.91■■■□□ 2.54
RETREG2-201ENST00000273048 APAF1O14727 1248 aa30.91■■■□□ 2.54
RETREG2-201ENST00000273048 FRAT1Q92837 279 aaPredicted RBP30.91■■■□□ 2.54
RETREG2-201ENST00000273048 ASXL1Q8IXJ9 1541 aa30.91■■■□□ 2.54
RETREG2-201ENST00000273048 TRMT2AQ8IZ69 625 aaKnown RBP30.89■■■□□ 2.54
RETREG2-201ENST00000273048 SYNMO15061 1565 aa30.89■■■□□ 2.54
RETREG2-201ENST00000273048 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
RETREG2-201ENST00000273048 PIK3C2GO75747 1445 aa30.88■■■□□ 2.53
RETREG2-201ENST00000273048 CDCA8Q53HL2 280 aa30.87■■■□□ 2.53
RETREG2-201ENST00000273048 PLCH2O75038 1416 aa30.87■■■□□ 2.53
RETREG2-201ENST00000273048 SCAF11Q99590 1463 aaKnown RBP30.85■■■□□ 2.53
RETREG2-201ENST00000273048 DMRT2Q9Y5R5 561 aa30.84■■■□□ 2.53
RETREG2-201ENST00000273048 NKTRP30414 1462 aaKnown RBP30.84■■■□□ 2.53
RETREG2-201ENST00000273048 TRAPPC8Q9Y2L5 1435 aa30.84■■■□□ 2.53
RETREG2-201ENST00000273048 FRAT2O75474 233 aaPredicted RBP30.83■■■□□ 2.53
RETREG2-201ENST00000273048 EFCAB2Q5VUJ9 269 aa30.82■■■□□ 2.52
RETREG2-201ENST00000273048 MYOM1P52179 1685 aa30.82■■■□□ 2.52
RETREG2-201ENST00000273048 EIF3AQ14152 1382 aaKnown RBP30.81■■■□□ 2.52
RETREG2-201ENST00000273048 IGHDP01880 384 aa30.81■■■□□ 2.52
RETREG2-201ENST00000273048 ABCC1P33527 1531 aa30.8■■■□□ 2.52
RETREG2-201ENST00000273048 SPHKAPQ2M3C7 1700 aa30.77■■■□□ 2.52
RETREG2-201ENST00000273048 E9PSI1 815 aa30.76■■■□□ 2.51
RETREG2-201ENST00000273048 NPC1L1Q9UHC9 1359 aa30.75■■■□□ 2.51
RETREG2-201ENST00000273048 UHRF1BP1LA0JNW5 1464 aa30.75■■■□□ 2.51
RETREG2-201ENST00000273048 SCAPERQ9BY12 1400 aa30.75■■■□□ 2.51
RETREG2-201ENST00000273048 AFAP1Q8N556 730 aa30.75■■■□□ 2.51
RETREG2-201ENST00000273048 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.73■■■□□ 2.51
RETREG2-201ENST00000273048 TRPM2O94759 1503 aa30.72■■■□□ 2.51
RETREG2-201ENST00000273048 USP19O94966 1318 aa30.71■■■□□ 2.51
RETREG2-201ENST00000273048 CLTCL1P53675 1640 aa30.71■■■□□ 2.51
RETREG2-201ENST00000273048 PANK1Q8TE04 598 aa30.7■■■□□ 2.51
RETREG2-201ENST00000273048 CARD14Q9BXL6 1004 aa30.7■■■□□ 2.51
RETREG2-201ENST00000273048 CEP152O94986 1710 aa30.7■■■□□ 2.5
RETREG2-201ENST00000273048 SEC24BO95487 1268 aa30.7■■■□□ 2.5
RETREG2-201ENST00000273048 COG6Q9Y2V7 657 aa30.69■■■□□ 2.5
RETREG2-201ENST00000273048 SPAG9O60271 1321 aaKnown RBP30.68■■■□□ 2.5
RETREG2-201ENST00000273048 KDM5AP29375 1690 aaKnown RBP30.68■■■□□ 2.5
RETREG2-201ENST00000273048 CANXP27824 592 aaKnown RBP30.66■■■□□ 2.5
RETREG2-201ENST00000273048 CFAP70Q5T0N1 1121 aa30.66■■■□□ 2.5
RETREG2-201ENST00000273048 CENPJQ9HC77 1338 aaPredicted RBP30.66■■■□□ 2.5
RETREG2-201ENST00000273048 PTPRTO14522 1441 aa30.65■■■□□ 2.5
RETREG2-201ENST00000273048 CLUAP1Q96AJ1 413 aa30.65■■■□□ 2.5
RETREG2-201ENST00000273048 CGNL1Q0VF96 1302 aa30.65■■■□□ 2.5
RETREG2-201ENST00000273048 PRKCSHP14314 528 aaPredicted RBP30.64■■■□□ 2.49
RETREG2-201ENST00000273048 PDE3AQ14432 1141 aa30.64■■■□□ 2.49
RETREG2-201ENST00000273048 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
RETREG2-201ENST00000273048 ERVK-7P63135 1459 aa30.63■■■□□ 2.49
RETREG2-201ENST00000273048 WWC1Q8IX03 1113 aa30.63■■■□□ 2.49
RETREG2-201ENST00000273048 STAC3Q96MF2 364 aa30.63■■■□□ 2.49
RETREG2-201ENST00000273048 VIRMAQ69YN4 1812 aaKnown RBP30.62■■■□□ 2.49
RETREG2-201ENST00000273048 NEUROD2Q15784 382 aa30.61■■■□□ 2.49
RETREG2-201ENST00000273048 RRP7AQ9Y3A4 280 aaKnown RBP30.58■■■□□ 2.49
RETREG2-201ENST00000273048 ADGRF5Q8IZF2 1346 aa30.57■■■□□ 2.48
RETREG2-201ENST00000273048 MAPK8IP3Q9UPT6 1336 aa30.57■■■□□ 2.48
RETREG2-201ENST00000273048 TNNT2P45379 298 aaPredicted RBP30.55■■■□□ 2.48
RETREG2-201ENST00000273048 SLKQ9H2G2 1235 aaPredicted RBP30.54■■■□□ 2.48
RETREG2-201ENST00000273048 TNNQ9UQP3 1299 aa30.54■■■□□ 2.48
RETREG2-201ENST00000273048 NGEFQ8N5V2 710 aa30.53■■■□□ 2.48
RETREG2-201ENST00000273048 RTEL1-TNFRSF6BF6WH68 1400 aa30.53■■■□□ 2.48
RETREG2-201ENST00000273048 UGGT1Q9NYU2 1555 aa30.53■■■□□ 2.48
RETREG2-201ENST00000273048 FANCAO15360 1455 aa30.52■■■□□ 2.48
RETREG2-201ENST00000273048 KIAA1210Q9ULL0 1709 aa30.51■■■□□ 2.48
RETREG2-201ENST00000273048 NINLQ9Y2I6 1382 aa30.51■■■□□ 2.48
RETREG2-201ENST00000273048 POGKQ9P215 609 aa30.51■■■□□ 2.48
RETREG2-201ENST00000273048 POLR3AO14802 1390 aaPredicted RBP30.51■■■□□ 2.47
RETREG2-201ENST00000273048 ARAP3Q8WWN8 1544 aa30.51■■■□□ 2.47
RETREG2-201ENST00000273048 NLRP1Q9C000 1473 aa30.51■■■□□ 2.47
RETREG2-201ENST00000273048 TET3O43151 1660 aa30.5■■■□□ 2.47
RETREG2-201ENST00000273048 ABCA6Q8N139 1617 aa30.5■■■□□ 2.47
RETREG2-201ENST00000273048 BCL2L13Q9BXK5 485 aa30.5■■■□□ 2.47
RETREG2-201ENST00000273048 RLBP1P12271 317 aa30.49■■■□□ 2.47
RETREG2-201ENST00000273048 RARSP54136 660 aaKnown RBP30.49■■■□□ 2.47
RETREG2-201ENST00000273048 PCDHB15Q9Y5E8 787 aa30.49■■■□□ 2.47
RETREG2-201ENST00000273048 BECN1Q14457 450 aa30.48■■■□□ 2.47
RETREG2-201ENST00000273048 ATP7AQ04656 1500 aa30.48■■■□□ 2.47
RETREG2-201ENST00000273048 DEPDC5O75140 1603 aa30.48■■■□□ 2.47
RETREG2-201ENST00000273048 KIF3BO15066 747 aa30.47■■■□□ 2.47
RETREG2-201ENST00000273048 MAP3K4Q9Y6R4 1608 aa30.47■■■□□ 2.47
RETREG2-201ENST00000273048 ABCA9Q8IUA7 1624 aa30.47■■■□□ 2.47
RETREG2-201ENST00000273048 KANK1Q14678 1352 aa30.46■■■□□ 2.47
RETREG2-201ENST00000273048 MORC1Q86VD1 984 aa30.45■■■□□ 2.47
RETREG2-201ENST00000273048 TCP11L2Q8N4U5 519 aa30.45■■■□□ 2.46
RETREG2-201ENST00000273048 INO80Q9ULG1 1556 aaPredicted RBP30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms