RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SYCP1Q15431 976 aa19.12■□□□□ 0.65
UBR3-201ENST00000272793 ABCC9O60706 1549 aa19.12■□□□□ 0.65
UBR3-201ENST00000272793 DEF6Q9H4E7 631 aa19.11■□□□□ 0.65
UBR3-201ENST00000272793 TICAM2Q86XR7 235 aa19.1■□□□□ 0.65
UBR3-201ENST00000272793 SKOR2Q2VWA4 1001 aaPredicted RBP19.1■□□□□ 0.65
UBR3-201ENST00000272793 TMF1P82094 1093 aa19.09■□□□□ 0.65
UBR3-201ENST00000272793 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
UBR3-201ENST00000272793 MSH5O43196 834 aa19.08■□□□□ 0.65
UBR3-201ENST00000272793 CPLX2Q6PUV4 134 aaKnown RBP19.08■□□□□ 0.65
UBR3-201ENST00000272793 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.65
UBR3-201ENST00000272793 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
UBR3-201ENST00000272793 FAM43AQ8N2R8 423 aa19.07■□□□□ 0.64
UBR3-201ENST00000272793 CHMP4CQ96CF2 233 aa19.07■□□□□ 0.64
UBR3-201ENST00000272793 RSPH4AQ5TD94 716 aa19.07■□□□□ 0.64
UBR3-201ENST00000272793 VPS37DQ86XT2 251 aa19.07■□□□□ 0.64
UBR3-201ENST00000272793 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
UBR3-201ENST00000272793 OLFM4Q6UX06 510 aa19.06■□□□□ 0.64
UBR3-201ENST00000272793 NFXL1Q6ZNB6 911 aa19.06■□□□□ 0.64
UBR3-201ENST00000272793 PPM1EQ8WY54 764 aa19.05■□□□□ 0.64
UBR3-201ENST00000272793 U2AF1L5P0DN76 240 aaPredicted RBP19.05■□□□□ 0.64
UBR3-201ENST00000272793 U2AF1Q01081 240 aaKnown RBP eCLIP19.05■□□□□ 0.642e-6■■■■□ 19.7
UBR3-201ENST00000272793 HDAC5Q9UQL6 1122 aa19.05■□□□□ 0.64
UBR3-201ENST00000272793 CPLX1O14810 134 aa19.04■□□□□ 0.64
UBR3-201ENST00000272793 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
UBR3-201ENST00000272793 ERICH2A1L162 156 aa19.04■□□□□ 0.64
UBR3-201ENST00000272793 CLIP1P30622 1438 aa19.03■□□□□ 0.64
UBR3-201ENST00000272793 CFAP57Q96MR6 1250 aa19.03■□□□□ 0.64
UBR3-201ENST00000272793 EIF3JO75822 258 aaKnown RBP19.03■□□□□ 0.64
UBR3-201ENST00000272793 GRIPAP1Q4V328 841 aa19.03■□□□□ 0.64
UBR3-201ENST00000272793 SPATA24Q86W54 205 aa19.02■□□□□ 0.64
UBR3-201ENST00000272793 ZWINTO95229 277 aa19.02■□□□□ 0.63
UBR3-201ENST00000272793 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.63
UBR3-201ENST00000272793 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.63
UBR3-201ENST00000272793 FAM193AP78312 1265 aa19.01■□□□□ 0.63
UBR3-201ENST00000272793 CCDC175P0C221 793 aa19.01■□□□□ 0.63
UBR3-201ENST00000272793 STK26Q9P289 416 aa19.01■□□□□ 0.63
UBR3-201ENST00000272793 USP8P40818 1118 aa19.01■□□□□ 0.63
UBR3-201ENST00000272793 SOGA3Q5TF21 947 aa19.01■□□□□ 0.63
UBR3-201ENST00000272793 STAMBPO95630 424 aa19■□□□□ 0.63
UBR3-201ENST00000272793 NAT10Q9H0A0 1025 aaKnown RBP19■□□□□ 0.63
UBR3-201ENST00000272793 LRRFIP1Q32MZ4 808 aaKnown RBP19■□□□□ 0.63
UBR3-201ENST00000272793 WDR70Q9NW82 654 aa19■□□□□ 0.63
UBR3-201ENST00000272793 MTERF4Q7Z6M4 381 aaKnown RBP18.99■□□□□ 0.63
UBR3-201ENST00000272793 IBSPP21815 317 aaPredicted RBP18.99■□□□□ 0.63
UBR3-201ENST00000272793 HSP90AB4PQ58FF6 505 aa18.99■□□□□ 0.63
UBR3-201ENST00000272793 CCDC112Q8NEF3 446 aa18.99■□□□□ 0.63
UBR3-201ENST00000272793 TRDNQ13061 729 aa18.98■□□□□ 0.63
UBR3-201ENST00000272793 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
UBR3-201ENST00000272793 NEBLO76041 1014 aa18.98■□□□□ 0.63
UBR3-201ENST00000272793 GPATCH11Q8N954 259 aa18.98■□□□□ 0.63
UBR3-201ENST00000272793 CHMP5Q9NZZ3 219 aa18.98■□□□□ 0.63
UBR3-201ENST00000272793 CFAP45Q9UL16 551 aa18.98■□□□□ 0.63
UBR3-201ENST00000272793 CCDC91Q7Z6B0 441 aa18.97■□□□□ 0.63
UBR3-201ENST00000272793 RBM10P98175 930 aaKnown RBP18.97■□□□□ 0.63
UBR3-201ENST00000272793 ANO2Q9NQ90 1003 aa18.97■□□□□ 0.63
UBR3-201ENST00000272793 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
UBR3-201ENST00000272793 CFDP1Q9UEE9 299 aaPredicted RBP18.97■□□□□ 0.63
UBR3-201ENST00000272793 IKQ13123 557 aaPredicted RBP18.96■□□□□ 0.63
UBR3-201ENST00000272793 CHMP4AQ9BY43 222 aa18.96■□□□□ 0.63
UBR3-201ENST00000272793 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
UBR3-201ENST00000272793 ERICH4A6NGS2 130 aa18.96■□□□□ 0.63
UBR3-201ENST00000272793 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
UBR3-201ENST00000272793 MAGEC2Q9UBF1 373 aaPredicted RBP18.96■□□□□ 0.63
UBR3-201ENST00000272793 CGNL1Q0VF96 1302 aa18.95■□□□□ 0.62
UBR3-201ENST00000272793 AEBP1Q8IUX7 1158 aa18.95■□□□□ 0.62
UBR3-201ENST00000272793 SAFBQ15424 915 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBR3-201ENST00000272793 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
UBR3-201ENST00000272793 CCDC181Q5TID7 509 aa18.94■□□□□ 0.62
UBR3-201ENST00000272793 MTMR7Q9Y216 660 aa18.94■□□□□ 0.62
UBR3-201ENST00000272793 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
UBR3-201ENST00000272793 ANKRD45Q5TZF3 282 aa18.94■□□□□ 0.62
UBR3-201ENST00000272793 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
UBR3-201ENST00000272793 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
UBR3-201ENST00000272793 SMC2O95347 1197 aa18.93■□□□□ 0.62
UBR3-201ENST00000272793 RABEP1Q15276 862 aa18.93■□□□□ 0.62
UBR3-201ENST00000272793 RBM33Q96EV2 1170 aaKnown RBP18.92■□□□□ 0.62
UBR3-201ENST00000272793 KDM4AO75164 1064 aa18.92■□□□□ 0.62
UBR3-201ENST00000272793 PSMD1Q99460 953 aa18.92■□□□□ 0.62
UBR3-201ENST00000272793 VPS37CA5D8V6 355 aaPredicted RBP18.92■□□□□ 0.62
UBR3-201ENST00000272793 FYB1O15117 783 aa18.91■□□□□ 0.62
UBR3-201ENST00000272793 HDGFL2Q7Z4V5 671 aaPredicted RBP18.91■□□□□ 0.62
UBR3-201ENST00000272793 HSPA5P11021 654 aaKnown RBP18.91■□□□□ 0.62
UBR3-201ENST00000272793 NGEFQ8N5V2 710 aa18.91■□□□□ 0.62
UBR3-201ENST00000272793 PDCL3Q9H2J4 239 aa18.91■□□□□ 0.62
UBR3-201ENST00000272793 BRMS1Q9HCU9 246 aa18.91■□□□□ 0.62
UBR3-201ENST00000272793 LRRCC1Q9C099 1032 aa18.91■□□□□ 0.62
UBR3-201ENST00000272793 PDE4AP27815 886 aa18.9■□□□□ 0.62
UBR3-201ENST00000272793 PLIN1O60240 522 aa18.9■□□□□ 0.62
UBR3-201ENST00000272793 LRRFIP2Q9Y608 721 aaKnown RBP18.9■□□□□ 0.62
UBR3-201ENST00000272793 CDK5RAP3Q96JB5 506 aa18.9■□□□□ 0.62
UBR3-201ENST00000272793 DNAJC2Q99543 621 aaKnown RBP18.89■□□□□ 0.61
UBR3-201ENST00000272793 KIF3BO15066 747 aa18.89■□□□□ 0.61
UBR3-201ENST00000272793 BMS1Q14692 1282 aaKnown RBP18.89■□□□□ 0.61
UBR3-201ENST00000272793 BCL2L13Q9BXK5 485 aa18.89■□□□□ 0.61
UBR3-201ENST00000272793 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
UBR3-201ENST00000272793 CCDC73Q6ZRK6 1079 aa18.89■□□□□ 0.61
UBR3-201ENST00000272793 ANAPC15P60006 121 aa18.88■□□□□ 0.61
UBR3-201ENST00000272793 SERPINA10Q9UK55 444 aa18.88■□□□□ 0.61
UBR3-201ENST00000272793 MLECQ14165 292 aa18.88■□□□□ 0.61
UBR3-201ENST00000272793 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms