RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 TRAK2O60296 914 aa15.01□□□□□ -0.01
ERBB2-201ENST00000269571 MCCP23508 829 aa15.01□□□□□ -0.01
ERBB2-201ENST00000269571 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
ERBB2-201ENST00000269571 C22orf23Q9BZE7 217 aa15□□□□□ -0.01
ERBB2-201ENST00000269571 MRE11P49959 708 aa14.99□□□□□ -0.01
ERBB2-201ENST00000269571 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
ERBB2-201ENST00000269571 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
ERBB2-201ENST00000269571 BCAR3O75815 825 aa14.99□□□□□ -0.01
ERBB2-201ENST00000269571 LNPKQ9C0E8 428 aa14.99□□□□□ -0.01
ERBB2-201ENST00000269571 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
ERBB2-201ENST00000269571 R3HCC1Q9Y3T6 440 aaKnown RBP14.98□□□□□ -0.01
ERBB2-201ENST00000269571 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
ERBB2-201ENST00000269571 PDCL3Q9H2J4 239 aa14.97□□□□□ -0.01
ERBB2-201ENST00000269571 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
ERBB2-201ENST00000269571 SMG6Q86US8 1419 aaKnown RBP14.97□□□□□ -0.01
ERBB2-201ENST00000269571 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
ERBB2-201ENST00000269571 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.01
ERBB2-201ENST00000269571 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.01
ERBB2-201ENST00000269571 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.01
ERBB2-201ENST00000269571 SLC4A10Q6U841 1118 aa14.95□□□□□ -0.02
ERBB2-201ENST00000269571 SYAP1Q96A49 352 aaPredicted RBP14.95□□□□□ -0.02
ERBB2-201ENST00000269571 SKOR2Q2VWA4 1001 aaPredicted RBP14.95□□□□□ -0.02
ERBB2-201ENST00000269571 ESPNB1AK53 854 aa14.94□□□□□ -0.02
ERBB2-201ENST00000269571 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
ERBB2-201ENST00000269571 KIAA1211Q6ZU35 1233 aa14.94□□□□□ -0.02
ERBB2-201ENST00000269571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.93□□□□□ -0.02
ERBB2-201ENST00000269571 RNF214Q8ND24 703 aa14.93□□□□□ -0.02
ERBB2-201ENST00000269571 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
ERBB2-201ENST00000269571 BCL11BQ9C0K0 894 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-201ENST00000269571 ST18O60284 1047 aa14.93□□□□□ -0.02
ERBB2-201ENST00000269571 NBPF1Q3BBV0 1214 aa14.92□□□□□ -0.02
ERBB2-201ENST00000269571 MCTP1Q6DN14 999 aa14.92□□□□□ -0.02
ERBB2-201ENST00000269571 BBXQ8WY36 941 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-201ENST00000269571 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
ERBB2-201ENST00000269571 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
ERBB2-201ENST00000269571 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
ERBB2-201ENST00000269571 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
ERBB2-201ENST00000269571 CSPP1Q1MSJ5 1256 aa14.91□□□□□ -0.02
ERBB2-201ENST00000269571 MPNDQ8N594 471 aa14.91□□□□□ -0.02
ERBB2-201ENST00000269571 NASPP49321 788 aaPredicted RBP14.91□□□□□ -0.02
ERBB2-201ENST00000269571 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
ERBB2-201ENST00000269571 GOLGA6L6A8MZA4 724 aa14.9□□□□□ -0.02
ERBB2-201ENST00000269571 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
ERBB2-201ENST00000269571 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
ERBB2-201ENST00000269571 NRDCO43847 1150 aa14.89□□□□□ -0.03
ERBB2-201ENST00000269571 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
ERBB2-201ENST00000269571 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
ERBB2-201ENST00000269571 CFAP44Q96MT7 982 aa14.89□□□□□ -0.03
ERBB2-201ENST00000269571 TULP1O00294 542 aaPredicted RBP14.88□□□□□ -0.03
ERBB2-201ENST00000269571 APPP05067 770 aa14.88□□□□□ -0.03
ERBB2-201ENST00000269571 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
ERBB2-201ENST00000269571 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
ERBB2-201ENST00000269571 TROQ12816 1431 aaPredicted RBP14.87□□□□□ -0.03
ERBB2-201ENST00000269571 ZHX1Q9UKY1 873 aaPredicted RBP14.87□□□□□ -0.03
ERBB2-201ENST00000269571 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
ERBB2-201ENST00000269571 CAVIN1Q6NZI2 390 aaKnown RBP14.87□□□□□ -0.03
ERBB2-201ENST00000269571 RILPL2Q969X0 211 aa14.87□□□□□ -0.03
ERBB2-201ENST00000269571 DDX19BQ9UMR2 479 aa14.86□□□□□ -0.03
ERBB2-201ENST00000269571 ARHGAP5Q13017 1502 aa14.86□□□□□ -0.03
ERBB2-201ENST00000269571 MCM4P33991 863 aa14.85□□□□□ -0.03
ERBB2-201ENST00000269571 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
ERBB2-201ENST00000269571 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
ERBB2-201ENST00000269571 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
ERBB2-201ENST00000269571 PDIA4P13667 645 aaKnown RBP14.85□□□□□ -0.03
ERBB2-201ENST00000269571 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
ERBB2-201ENST00000269571 PRDM10Q9NQV6 1147 aa14.85□□□□□ -0.03
ERBB2-201ENST00000269571 GRPEL1Q9HAV7 217 aa14.84□□□□□ -0.03
ERBB2-201ENST00000269571 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
ERBB2-201ENST00000269571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.84□□□□□ -0.03
ERBB2-201ENST00000269571 EID1Q9Y6B2 187 aa14.84□□□□□ -0.03
ERBB2-201ENST00000269571 MINK1Q8N4C8 1332 aaPredicted RBP14.83□□□□□ -0.03
ERBB2-201ENST00000269571 NPHP1O15259 732 aa14.83□□□□□ -0.04
ERBB2-201ENST00000269571 ZNF592Q92610 1267 aa14.83□□□□□ -0.04
ERBB2-201ENST00000269571 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
ERBB2-201ENST00000269571 TCP11L2Q8N4U5 519 aa14.83□□□□□ -0.04
ERBB2-201ENST00000269571 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
ERBB2-201ENST00000269571 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
ERBB2-201ENST00000269571 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
ERBB2-201ENST00000269571 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
ERBB2-201ENST00000269571 PHF14O94880 888 aa14.81□□□□□ -0.04
ERBB2-201ENST00000269571 CLCN1P35523 988 aa14.81□□□□□ -0.04
ERBB2-201ENST00000269571 HMMRO75330 724 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 RIPK4P57078 832 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 HFM1A2PYH4 1435 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 C9orf84Q5VXU9 1444 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 RUNDC1Q96C34 613 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 PCF11O94913 1555 aaKnown RBP14.8□□□□□ -0.04
ERBB2-201ENST00000269571 NGDNQ8NEJ9 315 aaKnown RBP14.8□□□□□ -0.04
ERBB2-201ENST00000269571 PRPF40AO75400 957 aaKnown RBP14.8□□□□□ -0.04
ERBB2-201ENST00000269571 RAPGEF3O95398 923 aa14.8□□□□□ -0.04
ERBB2-201ENST00000269571 IQGAP2Q13576 1575 aa14.79□□□□□ -0.04
ERBB2-201ENST00000269571 CCDC66A2RUB6 948 aa14.79□□□□□ -0.04
ERBB2-201ENST00000269571 C1orf115Q9H7X2 142 aa14.79□□□□□ -0.04
ERBB2-201ENST00000269571 UQCRHLA0A096LP55 91 aa14.79□□□□□ -0.04
ERBB2-201ENST00000269571 UQCRHP07919 91 aa14.79□□□□□ -0.04
ERBB2-201ENST00000269571 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
ERBB2-201ENST00000269571 TSR2Q969E8 191 aaKnown RBP14.78□□□□□ -0.04
ERBB2-201ENST00000269571 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
ERBB2-201ENST00000269571 CFAP70Q5T0N1 1121 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms