RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ZMYM4Q5VZL5 1548 aa31.76■■■□□ 2.68
RAB40B-201ENST00000269347 PER1O15534 1290 aaPredicted RBP31.76■■■□□ 2.67
RAB40B-201ENST00000269347 CHGAP10645 457 aaKnown RBP31.76■■■□□ 2.67
RAB40B-201ENST00000269347 NOS1P29475 1434 aa31.76■■■□□ 2.67
RAB40B-201ENST00000269347 SCAF11Q99590 1463 aaKnown RBP31.76■■■□□ 2.67
RAB40B-201ENST00000269347 KIF13AQ9H1H9 1805 aa31.75■■■□□ 2.67
RAB40B-201ENST00000269347 NRXN1Q9ULB1 1477 aa31.74■■■□□ 2.67
RAB40B-201ENST00000269347 PPLO60437 1756 aa31.74■■■□□ 2.67
RAB40B-201ENST00000269347 STAC3Q96MF2 364 aa31.73■■■□□ 2.67
RAB40B-201ENST00000269347 PIK3C2BO00750 1634 aa31.71■■■□□ 2.67
RAB40B-201ENST00000269347 TMF1P82094 1093 aa31.69■■■□□ 2.66
RAB40B-201ENST00000269347 PANK3Q9H999 370 aa31.67■■■□□ 2.66
RAB40B-201ENST00000269347 ZC3H13Q5T200 1668 aaKnown RBP31.66■■■□□ 2.66
RAB40B-201ENST00000269347 NUTM2DQ5VT03 806 aaPredicted RBP31.64■■■□□ 2.66
RAB40B-201ENST00000269347 ARHGAP31Q2M1Z3 1444 aa31.63■■■□□ 2.65
RAB40B-201ENST00000269347 SENP3-EIF4A1A0A087X0R7 540 aa31.63■■■□□ 2.65
RAB40B-201ENST00000269347 MYO5BQ9ULV0 1848 aa31.62■■■□□ 2.65
RAB40B-201ENST00000269347 PIK3C2GO75747 1445 aa31.61■■■□□ 2.65
RAB40B-201ENST00000269347 MYOM1P52179 1685 aa31.6■■■□□ 2.65
RAB40B-201ENST00000269347 PARD3Q8TEW0 1356 aa31.6■■■□□ 2.65
RAB40B-201ENST00000269347 IDI1Q13907 227 aa31.6■■■□□ 2.65
RAB40B-201ENST00000269347 PREX1Q8TCU6 1659 aa31.59■■■□□ 2.65
RAB40B-201ENST00000269347 PNISRQ8TF01 805 aaKnown RBP31.59■■■□□ 2.65
RAB40B-201ENST00000269347 FBXO31Q5XUX0 539 aaPredicted RBP31.57■■■□□ 2.64
RAB40B-201ENST00000269347 CC2D1BQ5T0F9 858 aaKnown RBP31.57■■■□□ 2.64
RAB40B-201ENST00000269347 MYBBP1AQ9BQG0 1328 aaKnown RBP31.57■■■□□ 2.64
RAB40B-201ENST00000269347 NEXMIFQ5QGS0 1516 aa31.56■■■□□ 2.64
RAB40B-201ENST00000269347 FKBP8Q14318 412 aa31.56■■■□□ 2.64
RAB40B-201ENST00000269347 ADGRB1O14514 1584 aa31.55■■■□□ 2.64
RAB40B-201ENST00000269347 RALBP1Q15311 655 aa31.54■■■□□ 2.64
RAB40B-201ENST00000269347 TMEM132EQ6IEE7 984 aa31.54■■■□□ 2.64
RAB40B-201ENST00000269347 ERVK-7P63135 1459 aa31.53■■■□□ 2.64
RAB40B-201ENST00000269347 KTN1Q86UP2 1357 aaKnown RBP31.52■■■□□ 2.64
RAB40B-201ENST00000269347 C14orf93Q9H972 538 aaKnown RBP31.52■■■□□ 2.64
RAB40B-201ENST00000269347 ZBED9Q6R2W3 1325 aa31.52■■■□□ 2.64
RAB40B-201ENST00000269347 TMC1Q8TDI8 760 aa31.51■■■□□ 2.64
RAB40B-201ENST00000269347 SENP3Q9H4L4 574 aaPredicted RBP31.51■■■□□ 2.64
RAB40B-201ENST00000269347 SETBP1Q9Y6X0 1596 aa31.51■■■□□ 2.63
RAB40B-201ENST00000269347 BCANQ96GW7 911 aa31.5■■■□□ 2.63
RAB40B-201ENST00000269347 MYO3AQ8NEV4 1616 aa31.5■■■□□ 2.63
RAB40B-201ENST00000269347 REREQ9P2R6 1566 aa31.5■■■□□ 2.63
RAB40B-201ENST00000269347 BRD4O60885 1362 aaPredicted RBP31.49■■■□□ 2.63
RAB40B-201ENST00000269347 EIF3AQ14152 1382 aaKnown RBP31.49■■■□□ 2.63
RAB40B-201ENST00000269347 CLTCQ00610 1675 aaKnown RBP31.47■■■□□ 2.63
RAB40B-201ENST00000269347 TMEM131LA2VDJ0 1609 aa31.47■■■□□ 2.63
RAB40B-201ENST00000269347 TRAK1Q9UPV9 953 aa31.47■■■□□ 2.63
RAB40B-201ENST00000269347 LRPPRCP42704 1394 aaKnown RBP31.47■■■□□ 2.63
RAB40B-201ENST00000269347 KDM5AP29375 1690 aaKnown RBP31.46■■■□□ 2.63
RAB40B-201ENST00000269347 RPGRIP1LQ68CZ1 1315 aa31.46■■■□□ 2.63
RAB40B-201ENST00000269347 AGLP35573 1532 aa31.46■■■□□ 2.63
RAB40B-201ENST00000269347 MLECQ14165 292 aa31.44■■■□□ 2.62
RAB40B-201ENST00000269347 NLRP13Q86W25 1043 aa31.4■■■□□ 2.62
RAB40B-201ENST00000269347 ARHGEF40Q8TER5 1519 aa31.4■■■□□ 2.62
RAB40B-201ENST00000269347 QRICH2Q9H0J4 1663 aa31.4■■■□□ 2.62
RAB40B-201ENST00000269347 AMER1Q5JTC6 1135 aaPredicted RBP31.4■■■□□ 2.62
RAB40B-201ENST00000269347 SLC52A1Q9NWF4 448 aa31.39■■■□□ 2.62
RAB40B-201ENST00000269347 ASXL1Q8IXJ9 1541 aa31.37■■■□□ 2.61
RAB40B-201ENST00000269347 CENPJQ9HC77 1338 aaPredicted RBP31.37■■■□□ 2.61
RAB40B-201ENST00000269347 IRX6P78412 446 aaPredicted RBP31.36■■■□□ 2.61
RAB40B-201ENST00000269347 ARHGEF28Q8N1W1 1705 aaKnown RBP31.34■■■□□ 2.61
RAB40B-201ENST00000269347 CDCA8Q53HL2 280 aa31.34■■■□□ 2.61
RAB40B-201ENST00000269347 VGFO15240 615 aaPredicted RBP31.33■■■□□ 2.61
RAB40B-201ENST00000269347 SBNO2Q9Y2G9 1366 aa31.33■■■□□ 2.61
RAB40B-201ENST00000269347 CARD14Q9BXL6 1004 aa31.32■■■□□ 2.6
RAB40B-201ENST00000269347 KNSTRNQ9Y448 316 aa31.31■■■□□ 2.6
RAB40B-201ENST00000269347 ZFYVE9O95405 1425 aa31.29■■■□□ 2.6
RAB40B-201ENST00000269347 SPATA31D1Q6ZQQ2 1576 aa31.27■■■□□ 2.6
RAB40B-201ENST00000269347 NEFLP07196 543 aa31.26■■■□□ 2.6
RAB40B-201ENST00000269347 PPP2R1AP30153 589 aa31.24■■■□□ 2.59
RAB40B-201ENST00000269347 TULP4Q9NRJ4 1543 aa31.23■■■□□ 2.59
RAB40B-201ENST00000269347 PPP6R1Q9UPN7 881 aa31.22■■■□□ 2.59
RAB40B-201ENST00000269347 SAFB2Q14151 953 aaKnown RBP eCLIP31.2■■■□□ 2.59
RAB40B-201ENST00000269347 STK26Q9P289 416 aa31.2■■■□□ 2.59
RAB40B-201ENST00000269347 SMG6Q86US8 1419 aaKnown RBP31.2■■■□□ 2.59
RAB40B-201ENST00000269347 A2ML1A8K2U0 1454 aa31.2■■■□□ 2.58
RAB40B-201ENST00000269347 SLC12A5Q9H2X9 1139 aa31.2■■■□□ 2.58
RAB40B-201ENST00000269347 SALL2Q9Y467 1007 aaPredicted RBP31.2■■■□□ 2.58
RAB40B-201ENST00000269347 ALKQ9UM73 1620 aa31.16■■■□□ 2.58
RAB40B-201ENST00000269347 ZMYM3Q14202 1370 aa31.15■■■□□ 2.58
RAB40B-201ENST00000269347 NPC1L1Q9UHC9 1359 aa31.15■■■□□ 2.58
RAB40B-201ENST00000269347 PTPRMP28827 1452 aa31.14■■■□□ 2.58
RAB40B-201ENST00000269347 NUDCQ9Y266 331 aa31.14■■■□□ 2.58
RAB40B-201ENST00000269347 STAG3Q9UJ98 1225 aa31.13■■■□□ 2.57
RAB40B-201ENST00000269347 BLMP54132 1417 aaPredicted RBP31.12■■■□□ 2.57
RAB40B-201ENST00000269347 SLC24A1O60721 1099 aa31.12■■■□□ 2.57
RAB40B-201ENST00000269347 ADAMTS8Q9UP79 889 aa31.11■■■□□ 2.57
RAB40B-201ENST00000269347 CABP2Q9NPB3 220 aa31.1■■■□□ 2.57
RAB40B-201ENST00000269347 SETD1AO15047 1707 aaKnown RBP31.09■■■□□ 2.57
RAB40B-201ENST00000269347 YTHDC2Q9H6S0 1430 aaKnown RBP31.09■■■□□ 2.57
RAB40B-201ENST00000269347 NSD3Q9BZ95 1437 aa31.09■■■□□ 2.57
RAB40B-201ENST00000269347 RIMS2Q9UQ26 1411 aa31.07■■■□□ 2.56
RAB40B-201ENST00000269347 PRAM1Q96QH2 718 aa31.05■■■□□ 2.56
RAB40B-201ENST00000269347 NRXN3Q9Y4C0 1643 aa31.04■■■□□ 2.56
RAB40B-201ENST00000269347 CDCA7LQ96GN5 454 aa31.03■■■□□ 2.56
RAB40B-201ENST00000269347 EVC2Q86UK5 1308 aa31.02■■■□□ 2.56
RAB40B-201ENST00000269347 MINK1Q8N4C8 1332 aaPredicted RBP31.02■■■□□ 2.56
RAB40B-201ENST00000269347 INSRP06213 1382 aa30.98■■■□□ 2.55
RAB40B-201ENST00000269347 ESF1Q9H501 851 aaKnown RBP30.98■■■□□ 2.55
RAB40B-201ENST00000269347 RNF123Q5XPI4 1314 aa30.97■■■□□ 2.55
RAB40B-201ENST00000269347 PLEKHH1Q9ULM0 1364 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms