RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
BEST3-201ENST00000266661 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
BEST3-201ENST00000266661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
BEST3-201ENST00000266661 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
BEST3-201ENST00000266661 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
BEST3-201ENST00000266661 PTPRTO14522 1441 aa16.69■□□□□ 0.26
BEST3-201ENST00000266661 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
BEST3-201ENST00000266661 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
BEST3-201ENST00000266661 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
BEST3-201ENST00000266661 KIF3BO15066 747 aa16.67■□□□□ 0.26
BEST3-201ENST00000266661 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
BEST3-201ENST00000266661 GGT6Q6P531 493 aa16.67■□□□□ 0.26
BEST3-201ENST00000266661 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
BEST3-201ENST00000266661 TRPM2O94759 1503 aa16.67■□□□□ 0.26
BEST3-201ENST00000266661 IQGAP1P46940 1657 aa16.67■□□□□ 0.26
BEST3-201ENST00000266661 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
BEST3-201ENST00000266661 PANK3Q9H999 370 aa16.66■□□□□ 0.26
BEST3-201ENST00000266661 TMF1P82094 1093 aa16.65■□□□□ 0.26
BEST3-201ENST00000266661 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
BEST3-201ENST00000266661 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
BEST3-201ENST00000266661 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
BEST3-201ENST00000266661 RCAN3Q9UKA8 241 aa16.64■□□□□ 0.25
BEST3-201ENST00000266661 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
BEST3-201ENST00000266661 STAC3Q96MF2 364 aa16.63■□□□□ 0.25
BEST3-201ENST00000266661 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
BEST3-201ENST00000266661 NEURL4Q96JN8 1562 aa16.62■□□□□ 0.25
BEST3-201ENST00000266661 FER1L4A9Z1Z3 1794 aa16.62■□□□□ 0.25
BEST3-201ENST00000266661 CEP152O94986 1710 aa16.62■□□□□ 0.25
BEST3-201ENST00000266661 ADAMTSL3P82987 1691 aa16.62■□□□□ 0.25
BEST3-201ENST00000266661 AGLP35573 1532 aa16.61■□□□□ 0.25
BEST3-201ENST00000266661 RIMS1Q86UR5 1692 aaKnown RBP16.61■□□□□ 0.25
BEST3-201ENST00000266661 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
BEST3-201ENST00000266661 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
BEST3-201ENST00000266661 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
BEST3-201ENST00000266661 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
BEST3-201ENST00000266661 TET3O43151 1660 aa16.59■□□□□ 0.25
BEST3-201ENST00000266661 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
BEST3-201ENST00000266661 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.25
BEST3-201ENST00000266661 CEBPAP49715 358 aaPredicted RBP16.58■□□□□ 0.24
BEST3-201ENST00000266661 MROH1Q8NDA8 1641 aa16.58■□□□□ 0.24
BEST3-201ENST00000266661 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
BEST3-201ENST00000266661 SYNMO15061 1565 aa16.57■□□□□ 0.24
BEST3-201ENST00000266661 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
BEST3-201ENST00000266661 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
BEST3-201ENST00000266661 MYOM1P52179 1685 aa16.54■□□□□ 0.24
BEST3-201ENST00000266661 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
BEST3-201ENST00000266661 PPP2R1AP30153 589 aa16.53■□□□□ 0.24
BEST3-201ENST00000266661 ERICH6Q7L0X2 663 aa16.53■□□□□ 0.24
BEST3-201ENST00000266661 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
BEST3-201ENST00000266661 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.24
BEST3-201ENST00000266661 ZNF521Q96K83 1311 aa16.52■□□□□ 0.24
BEST3-201ENST00000266661 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
BEST3-201ENST00000266661 C3P01024 1663 aa16.51■□□□□ 0.23
BEST3-201ENST00000266661 ESF1Q9H501 851 aaKnown RBP16.51■□□□□ 0.23
BEST3-201ENST00000266661 ASXL1Q8IXJ9 1541 aa16.51■□□□□ 0.23
BEST3-201ENST00000266661 MYOM2P54296 1465 aa16.51■□□□□ 0.23
BEST3-201ENST00000266661 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
BEST3-201ENST00000266661 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
BEST3-201ENST00000266661 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
BEST3-201ENST00000266661 PTPRMP28827 1452 aa16.49■□□□□ 0.23
BEST3-201ENST00000266661 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
BEST3-201ENST00000266661 PLEKHH1Q9ULM0 1364 aa16.49■□□□□ 0.23
BEST3-201ENST00000266661 KNSTRNQ9Y448 316 aa16.48■□□□□ 0.23
BEST3-201ENST00000266661 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
BEST3-201ENST00000266661 ABCC3O15438 1527 aa16.48■□□□□ 0.23
BEST3-201ENST00000266661 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
BEST3-201ENST00000266661 KANK1Q14678 1352 aa16.47■□□□□ 0.23
BEST3-201ENST00000266661 MS4A1P11836 297 aa16.47■□□□□ 0.23
BEST3-201ENST00000266661 FBXO31Q5XUX0 539 aaPredicted RBP16.47■□□□□ 0.23
BEST3-201ENST00000266661 IFT172Q9UG01 1749 aa16.46■□□□□ 0.23
BEST3-201ENST00000266661 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
BEST3-201ENST00000266661 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
BEST3-201ENST00000266661 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.22
BEST3-201ENST00000266661 ERVK-7P63135 1459 aa16.45■□□□□ 0.22
BEST3-201ENST00000266661 EIF3AQ14152 1382 aaKnown RBP16.45■□□□□ 0.22
BEST3-201ENST00000266661 PLIN1O60240 522 aa16.45■□□□□ 0.22
BEST3-201ENST00000266661 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
BEST3-201ENST00000266661 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
BEST3-201ENST00000266661 MROH2AA6NES4 1674 aa16.44■□□□□ 0.22
BEST3-201ENST00000266661 UGGT1Q9NYU2 1555 aa16.44■□□□□ 0.22
BEST3-201ENST00000266661 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
BEST3-201ENST00000266661 CRBNQ96SW2 442 aa16.44■□□□□ 0.22
BEST3-201ENST00000266661 KDM5AP29375 1690 aaKnown RBP16.43■□□□□ 0.22
BEST3-201ENST00000266661 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
BEST3-201ENST00000266661 BACH2Q9BYV9 841 aa16.43■□□□□ 0.22
BEST3-201ENST00000266661 MYO3AQ8NEV4 1616 aa16.43■□□□□ 0.22
BEST3-201ENST00000266661 PDE4AP27815 886 aa16.42■□□□□ 0.22
BEST3-201ENST00000266661 ADGRF5Q8IZF2 1346 aa16.42■□□□□ 0.22
BEST3-201ENST00000266661 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
BEST3-201ENST00000266661 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
BEST3-201ENST00000266661 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
BEST3-201ENST00000266661 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
BEST3-201ENST00000266661 KDM2BQ8NHM5 1336 aa16.4■□□□□ 0.22
BEST3-201ENST00000266661 SLFN5Q08AF3 891 aa16.39■□□□□ 0.22
BEST3-201ENST00000266661 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.22
BEST3-201ENST00000266661 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.22
BEST3-201ENST00000266661 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.22
BEST3-201ENST00000266661 NPATQ14207 1427 aa16.39■□□□□ 0.21
BEST3-201ENST00000266661 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
BEST3-201ENST00000266661 KIF1BO60333 1816 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms