RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 ZNF428Q96B54 188 aa10.44□□□□□ -0.74
COL6A5-201ENST00000265379 GGT6Q6P531 493 aa10.44□□□□□ -0.74
COL6A5-201ENST00000265379 KDM5BQ9UGL1 1544 aa10.43□□□□□ -0.74
COL6A5-201ENST00000265379 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
COL6A5-201ENST00000265379 ZMYM4Q5VZL5 1548 aa10.43□□□□□ -0.74
COL6A5-201ENST00000265379 WWC1Q8IX03 1113 aa10.43□□□□□ -0.74
COL6A5-201ENST00000265379 TNNT3P45378 269 aaPredicted RBP10.43□□□□□ -0.74
COL6A5-201ENST00000265379 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
COL6A5-201ENST00000265379 HMGB2P26583 209 aaKnown RBP10.43□□□□□ -0.74
COL6A5-201ENST00000265379 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
COL6A5-201ENST00000265379 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
COL6A5-201ENST00000265379 SYCP2Q9BX26 1530 aa10.42□□□□□ -0.74
COL6A5-201ENST00000265379 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
COL6A5-201ENST00000265379 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
COL6A5-201ENST00000265379 CHD1O14646 1710 aa10.41□□□□□ -0.74
COL6A5-201ENST00000265379 ATP7AQ04656 1500 aa10.41□□□□□ -0.74
COL6A5-201ENST00000265379 KIF7Q2M1P5 1343 aa10.41□□□□□ -0.74
COL6A5-201ENST00000265379 CHMP4CQ96CF2 233 aa10.41□□□□□ -0.74
COL6A5-201ENST00000265379 RWDD1Q9H446 243 aaPredicted RBP10.4□□□□□ -0.74
COL6A5-201ENST00000265379 RCAN3Q9UKA8 241 aa10.4□□□□□ -0.74
COL6A5-201ENST00000265379 ST20-MTHFSA0A0A6YYL1 179 aa10.4□□□□□ -0.74
COL6A5-201ENST00000265379 L1TD1Q5T7N2 865 aaKnown RBP10.4□□□□□ -0.75
COL6A5-201ENST00000265379 CHAF1AQ13111 956 aaPredicted RBP10.39□□□□□ -0.75
COL6A5-201ENST00000265379 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
COL6A5-201ENST00000265379 HMMRO75330 724 aa10.38□□□□□ -0.75
COL6A5-201ENST00000265379 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
COL6A5-201ENST00000265379 A2MP01023 1474 aa10.37□□□□□ -0.75
COL6A5-201ENST00000265379 ASXL2Q76L83 1435 aa10.37□□□□□ -0.75
COL6A5-201ENST00000265379 SUPT16HQ9Y5B9 1047 aaKnown RBP10.37□□□□□ -0.75
COL6A5-201ENST00000265379 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
COL6A5-201ENST00000265379 ABCC11Q96J66 1382 aa10.36□□□□□ -0.75
COL6A5-201ENST00000265379 ATP10AO60312 1499 aa10.36□□□□□ -0.75
COL6A5-201ENST00000265379 SETQ01105 290 aaPredicted RBP10.36□□□□□ -0.75
COL6A5-201ENST00000265379 RTF1Q92541 710 aaKnown RBP10.35□□□□□ -0.75
COL6A5-201ENST00000265379 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
COL6A5-201ENST00000265379 ZBTB7CA1YPR0 619 aa10.35□□□□□ -0.75
COL6A5-201ENST00000265379 NAP1L5Q96NT1 182 aaPredicted RBP10.35□□□□□ -0.75
COL6A5-201ENST00000265379 NCBP3Q53F19 620 aaKnown RBP10.35□□□□□ -0.75
COL6A5-201ENST00000265379 TET3O43151 1660 aa10.35□□□□□ -0.75
COL6A5-201ENST00000265379 SMG6Q86US8 1419 aaKnown RBP10.35□□□□□ -0.75
COL6A5-201ENST00000265379 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
COL6A5-201ENST00000265379 MCCP23508 829 aa10.34□□□□□ -0.75
COL6A5-201ENST00000265379 UNC13BO14795 1591 aa10.34□□□□□ -0.75
COL6A5-201ENST00000265379 STK11IPQ8N1F8 1099 aa10.34□□□□□ -0.75
COL6A5-201ENST00000265379 SBNO2Q9Y2G9 1366 aa10.34□□□□□ -0.75
COL6A5-201ENST00000265379 CENPQQ7L2Z9 268 aaPredicted RBP10.34□□□□□ -0.75
COL6A5-201ENST00000265379 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
COL6A5-201ENST00000265379 IQGAP3Q86VI3 1631 aa10.34□□□□□ -0.75
COL6A5-201ENST00000265379 KIF1BO60333 1816 aa10.33□□□□□ -0.76
COL6A5-201ENST00000265379 A0A0U1RQG5 324 aaPredicted RBP10.33□□□□□ -0.76
COL6A5-201ENST00000265379 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
COL6A5-201ENST00000265379 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
COL6A5-201ENST00000265379 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
COL6A5-201ENST00000265379 ABCC1P33527 1531 aa10.33□□□□□ -0.76
COL6A5-201ENST00000265379 CDC42BPAQ5VT25 1732 aa10.32□□□□□ -0.76
COL6A5-201ENST00000265379 AEBP2Q6ZN18 517 aaPredicted RBP10.32□□□□□ -0.76
COL6A5-201ENST00000265379 COG3Q96JB2 828 aa10.32□□□□□ -0.76
COL6A5-201ENST00000265379 CC2D1BQ5T0F9 858 aaKnown RBP10.32□□□□□ -0.76
COL6A5-201ENST00000265379 NPHP1O15259 732 aa10.32□□□□□ -0.76
COL6A5-201ENST00000265379 LAMC1P11047 1609 aa10.32□□□□□ -0.76
COL6A5-201ENST00000265379 FGD1P98174 961 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 THEMISQ8N1K5 641 aaPredicted RBP10.31□□□□□ -0.76
COL6A5-201ENST00000265379 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 TRPM2O94759 1503 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 PANK3Q9H999 370 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 MYOM2P54296 1465 aa10.31□□□□□ -0.76
COL6A5-201ENST00000265379 FOXD1Q16676 465 aa10.3□□□□□ -0.76
COL6A5-201ENST00000265379 NEURL4Q96JN8 1562 aa10.3□□□□□ -0.76
COL6A5-201ENST00000265379 STK31Q9BXU1 1019 aa10.3□□□□□ -0.76
COL6A5-201ENST00000265379 U2AF1L5P0DN76 240 aaPredicted RBP10.3□□□□□ -0.76
COL6A5-201ENST00000265379 U2AF1Q01081 240 aaKnown RBP eCLIP10.3□□□□□ -0.76
COL6A5-201ENST00000265379 HECW2Q9P2P5 1572 aa10.3□□□□□ -0.76
COL6A5-201ENST00000265379 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
COL6A5-201ENST00000265379 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
COL6A5-201ENST00000265379 ZCCHC11Q5TAX3 1644 aaKnown RBP10.29□□□□□ -0.76
COL6A5-201ENST00000265379 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
COL6A5-201ENST00000265379 APPP05067 770 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 KIAA2012Q0VF49 1180 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 PZPP20742 1482 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
COL6A5-201ENST00000265379 ASXL1Q8IXJ9 1541 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 POLR1AO95602 1720 aaPredicted RBP10.28□□□□□ -0.76
COL6A5-201ENST00000265379 GOLGA6L4A6NEF3 574 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 U2SURPO15042 1029 aaKnown RBP10.28□□□□□ -0.76
COL6A5-201ENST00000265379 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 ZFYVE9O95405 1425 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 CLSTN1O94985 981 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 GNAI1P63096 354 aa10.28□□□□□ -0.76
COL6A5-201ENST00000265379 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
COL6A5-201ENST00000265379 ZC3H13Q5T200 1668 aaKnown RBP10.28□□□□□ -0.76
COL6A5-201ENST00000265379 ANKRD36BQ8N2N9 1353 aa10.27□□□□□ -0.77
COL6A5-201ENST00000265379 PRDM15P57071 1507 aaPredicted RBP10.27□□□□□ -0.77
COL6A5-201ENST00000265379 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
COL6A5-201ENST00000265379 HSP90AB1P08238 724 aaKnown RBP10.27□□□□□ -0.77
COL6A5-201ENST00000265379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.27□□□□□ -0.77
COL6A5-201ENST00000265379 HMGB1P09429 215 aaKnown RBP10.27□□□□□ -0.77
COL6A5-201ENST00000265379 KCNJ4P48050 445 aa10.27□□□□□ -0.77
COL6A5-201ENST00000265379 NKTRP30414 1462 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms