RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ERBINQ96RT1 1412 aa25.23■■□□□ 1.63
CSPG5-201ENST00000264723 CGNL1Q0VF96 1302 aa25.23■■□□□ 1.63
CSPG5-201ENST00000264723 APBB1O00213 710 aa25.23■■□□□ 1.63
CSPG5-201ENST00000264723 PNNQ9H307 717 aaKnown RBP25.23■■□□□ 1.63
CSPG5-201ENST00000264723 CCDC141Q6ZP82 1450 aa25.22■■□□□ 1.63
CSPG5-201ENST00000264723 NFKBIBQ15653 356 aa25.22■■□□□ 1.63
CSPG5-201ENST00000264723 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
CSPG5-201ENST00000264723 PZPP20742 1482 aa25.2■■□□□ 1.63
CSPG5-201ENST00000264723 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
CSPG5-201ENST00000264723 MTHFSP49914 203 aa25.18■■□□□ 1.62
CSPG5-201ENST00000264723 RWDD1Q9H446 243 aaPredicted RBP25.18■■□□□ 1.62
CSPG5-201ENST00000264723 TEX14Q8IWB6 1497 aa25.18■■□□□ 1.62
CSPG5-201ENST00000264723 GSE1Q14687 1217 aa25.17■■□□□ 1.62
CSPG5-201ENST00000264723 TCP11L2Q8N4U5 519 aa25.17■■□□□ 1.62
CSPG5-201ENST00000264723 WDR62O43379 1518 aa25.16■■□□□ 1.62
CSPG5-201ENST00000264723 NGDNQ8NEJ9 315 aaKnown RBP25.16■■□□□ 1.62
CSPG5-201ENST00000264723 FOXD4L1Q9NU39 408 aa25.16■■□□□ 1.62
CSPG5-201ENST00000264723 TPRNQ4KMQ1 711 aa25.15■■□□□ 1.62
CSPG5-201ENST00000264723 LTV1Q96GA3 475 aaPredicted RBP25.15■■□□□ 1.62
CSPG5-201ENST00000264723 FRAT2O75474 233 aaPredicted RBP25.14■■□□□ 1.62
CSPG5-201ENST00000264723 HAP1P54257 671 aaPredicted RBP25.14■■□□□ 1.61
CSPG5-201ENST00000264723 SPATA31E1Q6ZUB1 1445 aa25.13■■□□□ 1.61
CSPG5-201ENST00000264723 NCLP19338 710 aaKnown RBP25.12■■□□□ 1.61
CSPG5-201ENST00000264723 BRPF3Q9ULD4 1205 aa25.12■■□□□ 1.61
CSPG5-201ENST00000264723 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
CSPG5-201ENST00000264723 PER1O15534 1290 aaPredicted RBP25.12■■□□□ 1.61
CSPG5-201ENST00000264723 STAC3Q96MF2 364 aa25.12■■□□□ 1.61
CSPG5-201ENST00000264723 USP35Q9P2H5 1018 aa25.12■■□□□ 1.61
CSPG5-201ENST00000264723 TESK2Q96S53 571 aa25.11■■□□□ 1.61
CSPG5-201ENST00000264723 SAMD9Q5K651 1589 aa25.11■■□□□ 1.61
CSPG5-201ENST00000264723 EID1Q9Y6B2 187 aa25.11■■□□□ 1.61
CSPG5-201ENST00000264723 DUSP27Q5VZP5 1158 aa25.1■■□□□ 1.61
CSPG5-201ENST00000264723 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
CSPG5-201ENST00000264723 RTF1Q92541 710 aaKnown RBP25.1■■□□□ 1.61
CSPG5-201ENST00000264723 KIF14Q15058 1648 aa25.09■■□□□ 1.61
CSPG5-201ENST00000264723 RAPGEF6Q8TEU7 1601 aa25.09■■□□□ 1.61
CSPG5-201ENST00000264723 HSP90AB1P08238 724 aaKnown RBP25.09■■□□□ 1.61
CSPG5-201ENST00000264723 TSR2Q969E8 191 aaKnown RBP25.08■■□□□ 1.61
CSPG5-201ENST00000264723 DISP1Q96F81 1524 aa25.08■■□□□ 1.61
CSPG5-201ENST00000264723 SLFN5Q08AF3 891 aa25.08■■□□□ 1.61
CSPG5-201ENST00000264723 DENND4BO75064 1496 aaPredicted RBP25.08■■□□□ 1.6
CSPG5-201ENST00000264723 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
CSPG5-201ENST00000264723 HMOX1P09601 288 aa25.07■■□□□ 1.6
CSPG5-201ENST00000264723 IPO8O15397 1037 aaKnown RBP25.07■■□□□ 1.6
CSPG5-201ENST00000264723 ADGRF5Q8IZF2 1346 aa25.06■■□□□ 1.6
CSPG5-201ENST00000264723 RUNDC1Q96C34 613 aa25.06■■□□□ 1.6
CSPG5-201ENST00000264723 HSCBQ8IWL3 235 aa25.05■■□□□ 1.6
CSPG5-201ENST00000264723 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
CSPG5-201ENST00000264723 ZKSCAN2Q63HK3 967 aa25.02■■□□□ 1.6
CSPG5-201ENST00000264723 RALGAPBQ86X10 1494 aa25.02■■□□□ 1.6
CSPG5-201ENST00000264723 AMPHP49418 695 aa25.02■■□□□ 1.6
CSPG5-201ENST00000264723 RIPK4P57078 832 aa25.02■■□□□ 1.6
CSPG5-201ENST00000264723 KIAA0556O60303 1618 aa25.02■■□□□ 1.6
CSPG5-201ENST00000264723 COG3Q96JB2 828 aa25.02■■□□□ 1.6
CSPG5-201ENST00000264723 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
CSPG5-201ENST00000264723 ANP32BQ92688 251 aaKnown RBP25.01■■□□□ 1.59
CSPG5-201ENST00000264723 SPINK5Q9NQ38 1064 aaPredicted RBP25■■□□□ 1.59
CSPG5-201ENST00000264723 WWC1Q8IX03 1113 aa24.99■■□□□ 1.59
CSPG5-201ENST00000264723 TXNDC2Q86VQ3 553 aa24.98■■□□□ 1.59
CSPG5-201ENST00000264723 DZIP1LQ8IYY4 767 aaKnown RBP24.98■■□□□ 1.59
CSPG5-201ENST00000264723 PARD3Q8TEW0 1356 aa24.98■■□□□ 1.59
CSPG5-201ENST00000264723 SLC4A10Q6U841 1118 aa24.98■■□□□ 1.59
CSPG5-201ENST00000264723 AMER1Q5JTC6 1135 aaPredicted RBP24.98■■□□□ 1.59
CSPG5-201ENST00000264723 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
CSPG5-201ENST00000264723 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
CSPG5-201ENST00000264723 PRAG1Q86YV5 1406 aa24.97■■□□□ 1.59
CSPG5-201ENST00000264723 CD109Q6YHK3 1445 aa24.96■■□□□ 1.59
CSPG5-201ENST00000264723 IGHDP01880 384 aa24.96■■□□□ 1.59
CSPG5-201ENST00000264723 LNPKQ9C0E8 428 aa24.96■■□□□ 1.59
CSPG5-201ENST00000264723 EXOSC9Q06265 439 aaKnown RBP24.95■■□□□ 1.59
CSPG5-201ENST00000264723 FBXO31Q5XUX0 539 aaPredicted RBP24.95■■□□□ 1.59
CSPG5-201ENST00000264723 ADGRL1O94910 1474 aa24.95■■□□□ 1.58
CSPG5-201ENST00000264723 TRIM44Q96DX7 344 aaPredicted RBP24.95■■□□□ 1.58
CSPG5-201ENST00000264723 CABP1Q9NZU7 370 aa24.95■■□□□ 1.58
CSPG5-201ENST00000264723 PLEKHH1Q9ULM0 1364 aa24.95■■□□□ 1.58
CSPG5-201ENST00000264723 DNMT1P26358 1616 aaKnown RBP24.95■■□□□ 1.58
CSPG5-201ENST00000264723 ANKRD45Q5TZF3 282 aa24.94■■□□□ 1.58
CSPG5-201ENST00000264723 ANO8Q9HCE9 1232 aaPredicted RBP24.94■■□□□ 1.58
CSPG5-201ENST00000264723 NUTM2GQ5VZR2 741 aa24.94■■□□□ 1.58
CSPG5-201ENST00000264723 NAP1L5Q96NT1 182 aaPredicted RBP24.94■■□□□ 1.58
CSPG5-201ENST00000264723 RNF123Q5XPI4 1314 aa24.94■■□□□ 1.58
CSPG5-201ENST00000264723 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
CSPG5-201ENST00000264723 CHMP4BQ9H444 224 aaKnown RBP24.92■■□□□ 1.58
CSPG5-201ENST00000264723 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
CSPG5-201ENST00000264723 LRPPRCP42704 1394 aaKnown RBP24.92■■□□□ 1.58
CSPG5-201ENST00000264723 IDI1Q13907 227 aa24.92■■□□□ 1.58
CSPG5-201ENST00000264723 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
CSPG5-201ENST00000264723 OS9Q13438 667 aaPredicted RBP24.91■■□□□ 1.58
CSPG5-201ENST00000264723 TRAPPC8Q9Y2L5 1435 aa24.9■■□□□ 1.58
CSPG5-201ENST00000264723 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.58
CSPG5-201ENST00000264723 SYCP2Q9BX26 1530 aa24.89■■□□□ 1.58
CSPG5-201ENST00000264723 FANCAO15360 1455 aa24.89■■□□□ 1.57
CSPG5-201ENST00000264723 SLC52A1Q9NWF4 448 aa24.88■■□□□ 1.57
CSPG5-201ENST00000264723 SLC26A8Q96RN1 970 aa24.88■■□□□ 1.57
CSPG5-201ENST00000264723 PDE3AQ14432 1141 aa24.88■■□□□ 1.57
CSPG5-201ENST00000264723 CDK19Q9BWU1 502 aa24.87■■□□□ 1.57
CSPG5-201ENST00000264723 WAPLQ7Z5K2 1190 aa24.87■■□□□ 1.57
CSPG5-201ENST00000264723 C1orf115Q9H7X2 142 aa24.86■■□□□ 1.57
CSPG5-201ENST00000264723 NECTIN2Q92692 538 aa24.86■■□□□ 1.57
CSPG5-201ENST00000264723 FAM135AQ9P2D6 1515 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms