RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
SEC22C-201ENST00000264454 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
SEC22C-201ENST00000264454 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.19
SEC22C-201ENST00000264454 SYNMO15061 1565 aa13.83□□□□□ -0.2
SEC22C-201ENST00000264454 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
SEC22C-201ENST00000264454 IFT172Q9UG01 1749 aa13.82□□□□□ -0.2
SEC22C-201ENST00000264454 SCAF11Q99590 1463 aaKnown RBP13.82□□□□□ -0.2
SEC22C-201ENST00000264454 SIGLEC1Q9BZZ2 1709 aa13.82□□□□□ -0.2
SEC22C-201ENST00000264454 IDI1Q13907 227 aa13.82□□□□□ -0.2
SEC22C-201ENST00000264454 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
SEC22C-201ENST00000264454 MROH2AA6NES4 1674 aa13.81□□□□□ -0.2
SEC22C-201ENST00000264454 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
SEC22C-201ENST00000264454 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
SEC22C-201ENST00000264454 TMF1P82094 1093 aa13.8□□□□□ -0.2
SEC22C-201ENST00000264454 ZFYVE9O95405 1425 aa13.8□□□□□ -0.2
SEC22C-201ENST00000264454 ERVK-7P63135 1459 aa13.79□□□□□ -0.2
SEC22C-201ENST00000264454 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
SEC22C-201ENST00000264454 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
SEC22C-201ENST00000264454 TESK2Q96S53 571 aa13.79□□□□□ -0.2
SEC22C-201ENST00000264454 PPLO60437 1756 aa13.78□□□□□ -0.2
SEC22C-201ENST00000264454 ILDR2Q71H61 639 aa13.78□□□□□ -0.2
SEC22C-201ENST00000264454 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
SEC22C-201ENST00000264454 SETBP1Q9Y6X0 1596 aa13.77□□□□□ -0.2
SEC22C-201ENST00000264454 PIK3C2GO75747 1445 aa13.77□□□□□ -0.2
SEC22C-201ENST00000264454 IQGAP1P46940 1657 aa13.77□□□□□ -0.2
SEC22C-201ENST00000264454 CLTCQ00610 1675 aaKnown RBP13.77□□□□□ -0.2
SEC22C-201ENST00000264454 MLECQ14165 292 aa13.77□□□□□ -0.21
SEC22C-201ENST00000264454 CFAP70Q5T0N1 1121 aa13.77□□□□□ -0.21
SEC22C-201ENST00000264454 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
SEC22C-201ENST00000264454 SPATA31D1Q6ZQQ2 1576 aa13.77□□□□□ -0.21
SEC22C-201ENST00000264454 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.21
SEC22C-201ENST00000264454 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
SEC22C-201ENST00000264454 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
SEC22C-201ENST00000264454 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
SEC22C-201ENST00000264454 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
SEC22C-201ENST00000264454 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
SEC22C-201ENST00000264454 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
SEC22C-201ENST00000264454 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
SEC22C-201ENST00000264454 KTN1Q86UP2 1357 aaKnown RBP13.73□□□□□ -0.21
SEC22C-201ENST00000264454 PTPRMP28827 1452 aa13.72□□□□□ -0.21
SEC22C-201ENST00000264454 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
SEC22C-201ENST00000264454 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.22
SEC22C-201ENST00000264454 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEC22C-201ENST00000264454 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
SEC22C-201ENST00000264454 A2ML1A8K2U0 1454 aa13.68□□□□□ -0.22
SEC22C-201ENST00000264454 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
SEC22C-201ENST00000264454 RALBP1Q15311 655 aa13.68□□□□□ -0.22
SEC22C-201ENST00000264454 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
SEC22C-201ENST00000264454 TNRQ92752 1358 aa13.67□□□□□ -0.22
SEC22C-201ENST00000264454 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
SEC22C-201ENST00000264454 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
SEC22C-201ENST00000264454 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
SEC22C-201ENST00000264454 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
SEC22C-201ENST00000264454 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
SEC22C-201ENST00000264454 TRAK1Q9UPV9 953 aa13.64□□□□□ -0.23
SEC22C-201ENST00000264454 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
SEC22C-201ENST00000264454 ADAMTSL3P82987 1691 aa13.64□□□□□ -0.23
SEC22C-201ENST00000264454 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
SEC22C-201ENST00000264454 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
SEC22C-201ENST00000264454 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
SEC22C-201ENST00000264454 PANK3Q9H999 370 aa13.63□□□□□ -0.23
SEC22C-201ENST00000264454 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
SEC22C-201ENST00000264454 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
SEC22C-201ENST00000264454 ALKQ9UM73 1620 aa13.6□□□□□ -0.23
SEC22C-201ENST00000264454 KNSTRNQ9Y448 316 aa13.59□□□□□ -0.23
SEC22C-201ENST00000264454 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
SEC22C-201ENST00000264454 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
SEC22C-201ENST00000264454 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
SEC22C-201ENST00000264454 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.24
SEC22C-201ENST00000264454 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.24
SEC22C-201ENST00000264454 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
SEC22C-201ENST00000264454 HSPA2P54652 639 aa13.58□□□□□ -0.24
SEC22C-201ENST00000264454 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
SEC22C-201ENST00000264454 QRICH2Q9H0J4 1663 aa13.57□□□□□ -0.24
SEC22C-201ENST00000264454 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
SEC22C-201ENST00000264454 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
SEC22C-201ENST00000264454 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
SEC22C-201ENST00000264454 C3P01024 1663 aa13.55□□□□□ -0.24
SEC22C-201ENST00000264454 ASXL1Q8IXJ9 1541 aa13.55□□□□□ -0.24
SEC22C-201ENST00000264454 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
SEC22C-201ENST00000264454 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
SEC22C-201ENST00000264454 UBR1Q8IWV7 1749 aa13.55□□□□□ -0.24
SEC22C-201ENST00000264454 CCDC184Q52MB2 194 aa13.55□□□□□ -0.24
SEC22C-201ENST00000264454 SIRT1Q96EB6 747 aa13.55□□□□□ -0.24
SEC22C-201ENST00000264454 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
SEC22C-201ENST00000264454 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
SEC22C-201ENST00000264454 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
SEC22C-201ENST00000264454 POGKQ9P215 609 aa13.54□□□□□ -0.24
SEC22C-201ENST00000264454 STK26Q9P289 416 aa13.54□□□□□ -0.24
SEC22C-201ENST00000264454 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
SEC22C-201ENST00000264454 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
SEC22C-201ENST00000264454 MYOM1P52179 1685 aa13.52□□□□□ -0.24
SEC22C-201ENST00000264454 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
SEC22C-201ENST00000264454 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.25
SEC22C-201ENST00000264454 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
SEC22C-201ENST00000264454 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
SEC22C-201ENST00000264454 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC22C-201ENST00000264454 CC2D1BQ5T0F9 858 aaKnown RBP13.51□□□□□ -0.25
SEC22C-201ENST00000264454 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
SEC22C-201ENST00000264454 SLIT1O75093 1534 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms