RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 RPGRIP1LQ68CZ1 1315 aa33.66■■■□□ 2.98
EPCAM-201ENST00000263735 CHGAP10645 457 aaKnown RBP33.66■■■□□ 2.98
EPCAM-201ENST00000263735 USP47Q96K76 1375 aa33.65■■■□□ 2.98
EPCAM-201ENST00000263735 KDM5AP29375 1690 aaKnown RBP33.64■■■□□ 2.98
EPCAM-201ENST00000263735 CARD11Q9BXL7 1154 aa33.63■■■□□ 2.97
EPCAM-201ENST00000263735 IQGAP1P46940 1657 aa33.62■■■□□ 2.97
EPCAM-201ENST00000263735 ADAMTSL3P82987 1691 aa33.55■■■□□ 2.96
EPCAM-201ENST00000263735 RIMS1Q86UR5 1692 aaKnown RBP33.55■■■□□ 2.96
EPCAM-201ENST00000263735 PIK3C2GO75747 1445 aa33.54■■■□□ 2.96
EPCAM-201ENST00000263735 ADGRF5Q8IZF2 1346 aa33.53■■■□□ 2.96
EPCAM-201ENST00000263735 NBPF1Q3BBV0 1214 aa33.53■■■□□ 2.96
EPCAM-201ENST00000263735 TNRQ92752 1358 aa33.53■■■□□ 2.96
EPCAM-201ENST00000263735 SETBP1Q9Y6X0 1596 aa33.53■■■□□ 2.96
EPCAM-201ENST00000263735 ZFYVE9O95405 1425 aa33.52■■■□□ 2.96
EPCAM-201ENST00000263735 UBR1Q8IWV7 1749 aa33.52■■■□□ 2.96
EPCAM-201ENST00000263735 A2ML1A8K2U0 1454 aa33.5■■■□□ 2.95
EPCAM-201ENST00000263735 VGFO15240 615 aaPredicted RBP33.46■■■□□ 2.95
EPCAM-201ENST00000263735 NLRP1Q9C000 1473 aa33.46■■■□□ 2.95
EPCAM-201ENST00000263735 STAG3Q9UJ98 1225 aa33.45■■■□□ 2.95
EPCAM-201ENST00000263735 SCAF11Q99590 1463 aaKnown RBP33.42■■■□□ 2.94
EPCAM-201ENST00000263735 WASHC2AQ641Q2 1341 aa33.41■■■□□ 2.94
EPCAM-201ENST00000263735 MYO3AQ8NEV4 1616 aa33.4■■■□□ 2.94
EPCAM-201ENST00000263735 CCDC7Q96M83 1385 aa33.4■■■□□ 2.94
EPCAM-201ENST00000263735 ST20-MTHFSA0A0A6YYL1 179 aa33.38■■■□□ 2.93
EPCAM-201ENST00000263735 CFAP70Q5T0N1 1121 aa33.38■■■□□ 2.93
EPCAM-201ENST00000263735 DDX10Q13206 875 aaKnown RBP33.37■■■□□ 2.93
EPCAM-201ENST00000263735 ADGRB1O14514 1584 aa33.37■■■□□ 2.93
EPCAM-201ENST00000263735 CEBPAP49715 358 aaPredicted RBP33.36■■■□□ 2.93
EPCAM-201ENST00000263735 C14orf93Q9H972 538 aaKnown RBP33.35■■■□□ 2.93
EPCAM-201ENST00000263735 RIMS2Q9UQ26 1411 aa33.34■■■□□ 2.93
EPCAM-201ENST00000263735 C11orf95C9JLR9 678 aaPredicted RBP33.33■■■□□ 2.93
EPCAM-201ENST00000263735 EIF3AQ14152 1382 aaKnown RBP33.33■■■□□ 2.93
EPCAM-201ENST00000263735 KIF7Q2M1P5 1343 aa33.31■■■□□ 2.92
EPCAM-201ENST00000263735 SETD1AO15047 1707 aaKnown RBP33.3■■■□□ 2.92
EPCAM-201ENST00000263735 SETD1BQ9UPS6 1966 aaKnown RBP33.3■■■□□ 2.92
EPCAM-201ENST00000263735 NUTM2DQ5VT03 806 aaPredicted RBP33.3■■■□□ 2.92
EPCAM-201ENST00000263735 ARHGEF28Q8N1W1 1705 aaKnown RBP33.28■■■□□ 2.92
EPCAM-201ENST00000263735 ZNF142P52746 1687 aaPredicted RBP33.27■■■□□ 2.92
EPCAM-201ENST00000263735 ALKQ9UM73 1620 aa33.27■■■□□ 2.92
EPCAM-201ENST00000263735 NRXN3Q9Y4C0 1643 aa33.25■■■□□ 2.91
EPCAM-201ENST00000263735 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.25■■■□□ 2.91
EPCAM-201ENST00000263735 ASXL1Q8IXJ9 1541 aa33.23■■■□□ 2.91
EPCAM-201ENST00000263735 CEP170BQ9Y4F5 1589 aaPredicted RBP33.23■■■□□ 2.91
EPCAM-201ENST00000263735 QRICH2Q9H0J4 1663 aa33.23■■■□□ 2.91
EPCAM-201ENST00000263735 TMEM2Q9UHN6 1383 aa33.23■■■□□ 2.91
EPCAM-201ENST00000263735 TESK2Q96S53 571 aa33.22■■■□□ 2.91
EPCAM-201ENST00000263735 SLIT1O75093 1534 aa33.21■■■□□ 2.91
EPCAM-201ENST00000263735 HDGFP51858 240 aaKnown RBP33.21■■■□□ 2.91
EPCAM-201ENST00000263735 MIER1Q8N108 512 aa33.2■■■□□ 2.91
EPCAM-201ENST00000263735 PLPPR3Q6T4P5 718 aa33.18■■■□□ 2.9
EPCAM-201ENST00000263735 ARHGAP23Q9P227 1491 aa33.17■■■□□ 2.9
EPCAM-201ENST00000263735 TMF1P82094 1093 aa33.14■■■□□ 2.89
EPCAM-201ENST00000263735 SBNO2Q9Y2G9 1366 aa33.13■■■□□ 2.89
EPCAM-201ENST00000263735 TMEM132EQ6IEE7 984 aa33.13■■■□□ 2.89
EPCAM-201ENST00000263735 DISP3Q9P2K9 1392 aa33.12■■■□□ 2.89
EPCAM-201ENST00000263735 SLC24A1O60721 1099 aa33.12■■■□□ 2.89
EPCAM-201ENST00000263735 PTPRMP28827 1452 aa33.11■■■□□ 2.89
EPCAM-201ENST00000263735 KNDC1Q76NI1 1749 aa33.08■■■□□ 2.89
EPCAM-201ENST00000263735 THEMISQ8N1K5 641 aaPredicted RBP33.08■■■□□ 2.89
EPCAM-201ENST00000263735 YTHDC2Q9H6S0 1430 aaKnown RBP33.07■■■□□ 2.88
EPCAM-201ENST00000263735 TRAK1Q9UPV9 953 aa33.07■■■□□ 2.88
EPCAM-201ENST00000263735 CENPJQ9HC77 1338 aaPredicted RBP33.07■■■□□ 2.88
EPCAM-201ENST00000263735 POLR3GLQ9BT43 218 aa33.06■■■□□ 2.88
EPCAM-201ENST00000263735 PLEKHG1Q9ULL1 1385 aa33.05■■■□□ 2.88
EPCAM-201ENST00000263735 MYOM1P52179 1685 aa33.04■■■□□ 2.88
EPCAM-201ENST00000263735 CDCA8Q53HL2 280 aa33.02■■■□□ 2.88
EPCAM-201ENST00000263735 DLC1Q96QB1 1528 aa33.02■■■□□ 2.88
EPCAM-201ENST00000263735 EID1Q9Y6B2 187 aa33.02■■■□□ 2.88
EPCAM-201ENST00000263735 ANP32CO43423 234 aa33.01■■■□□ 2.87
EPCAM-201ENST00000263735 SENP3Q9H4L4 574 aaPredicted RBP32.99■■■□□ 2.87
EPCAM-201ENST00000263735 DIP2AQ14689 1571 aa32.99■■■□□ 2.87
EPCAM-201ENST00000263735 LTKP29376 864 aa32.98■■■□□ 2.87
EPCAM-201ENST00000263735 TXNDC2Q86VQ3 553 aa32.97■■■□□ 2.87
EPCAM-201ENST00000263735 ADAMTS13Q76LX8 1427 aa32.97■■■□□ 2.87
EPCAM-201ENST00000263735 LRPPRCP42704 1394 aaKnown RBP32.96■■■□□ 2.87
EPCAM-201ENST00000263735 MED14O60244 1454 aa32.94■■■□□ 2.86
EPCAM-201ENST00000263735 CPS1P31327 1500 aa32.93■■■□□ 2.86
EPCAM-201ENST00000263735 STK26Q9P289 416 aa32.91■■■□□ 2.86
EPCAM-201ENST00000263735 METP08581 1390 aa32.91■■■□□ 2.86
EPCAM-201ENST00000263735 ABCC11Q96J66 1382 aa32.9■■■□□ 2.86
EPCAM-201ENST00000263735 BCANQ96GW7 911 aa32.89■■■□□ 2.86
EPCAM-201ENST00000263735 TULP4Q9NRJ4 1543 aa32.89■■■□□ 2.86
EPCAM-201ENST00000263735 TECPR2O15040 1411 aa32.89■■■□□ 2.86
EPCAM-201ENST00000263735 PRAM1Q96QH2 718 aa32.82■■■□□ 2.85
EPCAM-201ENST00000263735 FAM135BQ49AJ0 1406 aa32.82■■■□□ 2.84
EPCAM-201ENST00000263735 CCER2I3L3R5 266 aa32.81■■■□□ 2.84
EPCAM-201ENST00000263735 POGKQ9P215 609 aa32.81■■■□□ 2.84
EPCAM-201ENST00000263735 EVC2Q86UK5 1308 aa32.81■■■□□ 2.84
EPCAM-201ENST00000263735 PUS7Q96PZ0 661 aaKnown RBP32.8■■■□□ 2.84
EPCAM-201ENST00000263735 TBX22Q9Y458 520 aa32.79■■■□□ 2.84
EPCAM-201ENST00000263735 ANKLE2Q86XL3 938 aa32.78■■■□□ 2.84
EPCAM-201ENST00000263735 SIRT1Q96EB6 747 aa32.78■■■□□ 2.84
EPCAM-201ENST00000263735 PRKRIP1Q9H875 184 aaPredicted RBP32.78■■■□□ 2.84
EPCAM-201ENST00000263735 XRN1Q8IZH2 1706 aaKnown RBP32.78■■■□□ 2.84
EPCAM-201ENST00000263735 CHD2O14647 1828 aaKnown RBP32.76■■■□□ 2.83
EPCAM-201ENST00000263735 SAFB2Q14151 953 aaKnown RBP eCLIP32.74■■■□□ 2.83
EPCAM-201ENST00000263735 SLC26A8Q96RN1 970 aa32.74■■■□□ 2.83
EPCAM-201ENST00000263735 PANK3Q9H999 370 aa32.74■■■□□ 2.83
EPCAM-201ENST00000263735 PER1O15534 1290 aaPredicted RBP32.72■■■□□ 2.83
EPCAM-201ENST00000263735 PIK3R4Q99570 1358 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms