RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 SCAF11Q99590 1463 aaKnown RBP14.11□□□□□ -0.15
COMMD9-201ENST00000263401 NLRP13Q86W25 1043 aa14.1□□□□□ -0.15
COMMD9-201ENST00000263401 TMEM132EQ6IEE7 984 aa14.1□□□□□ -0.15
COMMD9-201ENST00000263401 B4GALNT3Q6L9W6 998 aa14.1□□□□□ -0.15
COMMD9-201ENST00000263401 YEATS2Q9ULM3 1422 aa14.1□□□□□ -0.15
COMMD9-201ENST00000263401 LRPPRCP42704 1394 aaKnown RBP14.1□□□□□ -0.15
COMMD9-201ENST00000263401 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
COMMD9-201ENST00000263401 MAP3K4Q9Y6R4 1608 aa14.09□□□□□ -0.15
COMMD9-201ENST00000263401 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.16
COMMD9-201ENST00000263401 TRAK1Q9UPV9 953 aa14.08□□□□□ -0.16
COMMD9-201ENST00000263401 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
COMMD9-201ENST00000263401 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
COMMD9-201ENST00000263401 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
COMMD9-201ENST00000263401 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
COMMD9-201ENST00000263401 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
COMMD9-201ENST00000263401 FAM69CQ0P6D2 419 aa14.06□□□□□ -0.16
COMMD9-201ENST00000263401 ABCC3O15438 1527 aa14.06□□□□□ -0.16
COMMD9-201ENST00000263401 IFT172Q9UG01 1749 aa14.06□□□□□ -0.16
COMMD9-201ENST00000263401 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
COMMD9-201ENST00000263401 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
COMMD9-201ENST00000263401 LMTK2Q8IWU2 1503 aa14.05□□□□□ -0.16
COMMD9-201ENST00000263401 MYOM1P52179 1685 aa14.04□□□□□ -0.16
COMMD9-201ENST00000263401 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
COMMD9-201ENST00000263401 ADGRB3O60242 1522 aa14.04□□□□□ -0.16
COMMD9-201ENST00000263401 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
COMMD9-201ENST00000263401 NEO1Q92859 1461 aa14.03□□□□□ -0.16
COMMD9-201ENST00000263401 MYOM2P54296 1465 aa14.03□□□□□ -0.16
COMMD9-201ENST00000263401 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
COMMD9-201ENST00000263401 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
COMMD9-201ENST00000263401 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
COMMD9-201ENST00000263401 CAMSAP1Q5T5Y3 1602 aa14.02□□□□□ -0.17
COMMD9-201ENST00000263401 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
COMMD9-201ENST00000263401 PPP4R2Q9NY27 417 aa14.02□□□□□ -0.17
COMMD9-201ENST00000263401 ERVK-7P63135 1459 aa14.02□□□□□ -0.17
COMMD9-201ENST00000263401 PPP2R1AP30153 589 aa14.01□□□□□ -0.17
COMMD9-201ENST00000263401 EIF3AQ14152 1382 aaKnown RBP14.01□□□□□ -0.17
COMMD9-201ENST00000263401 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
COMMD9-201ENST00000263401 FBXO31Q5XUX0 539 aaPredicted RBP14□□□□□ -0.17
COMMD9-201ENST00000263401 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
COMMD9-201ENST00000263401 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
COMMD9-201ENST00000263401 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
COMMD9-201ENST00000263401 PPLO60437 1756 aa14□□□□□ -0.17
COMMD9-201ENST00000263401 SYNMO15061 1565 aa14□□□□□ -0.17
COMMD9-201ENST00000263401 IDI1Q13907 227 aa14□□□□□ -0.17
COMMD9-201ENST00000263401 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
COMMD9-201ENST00000263401 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
COMMD9-201ENST00000263401 RBM19Q9Y4C8 960 aaKnown RBP13.99□□□□□ -0.17
COMMD9-201ENST00000263401 NRXN1Q9ULB1 1477 aa13.98□□□□□ -0.17
COMMD9-201ENST00000263401 MLECQ14165 292 aa13.98□□□□□ -0.17
COMMD9-201ENST00000263401 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
COMMD9-201ENST00000263401 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
COMMD9-201ENST00000263401 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
COMMD9-201ENST00000263401 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
COMMD9-201ENST00000263401 STK26Q9P289 416 aa13.97□□□□□ -0.17
COMMD9-201ENST00000263401 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
COMMD9-201ENST00000263401 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
COMMD9-201ENST00000263401 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
COMMD9-201ENST00000263401 C14orf93Q9H972 538 aaKnown RBP13.97□□□□□ -0.17
COMMD9-201ENST00000263401 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.17
COMMD9-201ENST00000263401 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
COMMD9-201ENST00000263401 PLIN1O60240 522 aa13.94□□□□□ -0.18
COMMD9-201ENST00000263401 ADGRB1O14514 1584 aa13.94□□□□□ -0.18
COMMD9-201ENST00000263401 RNF123Q5XPI4 1314 aa13.94□□□□□ -0.18
COMMD9-201ENST00000263401 BLMP54132 1417 aaPredicted RBP13.93□□□□□ -0.18
COMMD9-201ENST00000263401 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
COMMD9-201ENST00000263401 DIP2BQ9P265 1576 aa13.93□□□□□ -0.18
COMMD9-201ENST00000263401 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
COMMD9-201ENST00000263401 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
COMMD9-201ENST00000263401 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
COMMD9-201ENST00000263401 PIK3C2BO00750 1634 aa13.91□□□□□ -0.18
COMMD9-201ENST00000263401 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
COMMD9-201ENST00000263401 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
COMMD9-201ENST00000263401 RRP1P56182 461 aaKnown RBP13.91□□□□□ -0.18
COMMD9-201ENST00000263401 ERICH6BQ5W0A0 696 aa13.91□□□□□ -0.18
COMMD9-201ENST00000263401 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
COMMD9-201ENST00000263401 GLI2P10070 1586 aa13.9□□□□□ -0.18
COMMD9-201ENST00000263401 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
COMMD9-201ENST00000263401 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.18
COMMD9-201ENST00000263401 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
COMMD9-201ENST00000263401 SETBP1Q9Y6X0 1596 aa13.89□□□□□ -0.19
COMMD9-201ENST00000263401 ZC3H13Q5T200 1668 aaKnown RBP13.89□□□□□ -0.19
COMMD9-201ENST00000263401 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
COMMD9-201ENST00000263401 PREX1Q8TCU6 1659 aa13.89□□□□□ -0.19
COMMD9-201ENST00000263401 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
COMMD9-201ENST00000263401 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
COMMD9-201ENST00000263401 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
COMMD9-201ENST00000263401 ARHGEF28Q8N1W1 1705 aaKnown RBP13.86□□□□□ -0.19
COMMD9-201ENST00000263401 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
COMMD9-201ENST00000263401 APAF1O14727 1248 aa13.86□□□□□ -0.19
COMMD9-201ENST00000263401 ZMYM4Q5VZL5 1548 aa13.86□□□□□ -0.19
COMMD9-201ENST00000263401 ARHGAP31Q2M1Z3 1444 aa13.85□□□□□ -0.19
COMMD9-201ENST00000263401 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
COMMD9-201ENST00000263401 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
COMMD9-201ENST00000263401 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
COMMD9-201ENST00000263401 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
COMMD9-201ENST00000263401 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
COMMD9-201ENST00000263401 TMEM131LA2VDJ0 1609 aa13.84□□□□□ -0.19
COMMD9-201ENST00000263401 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
COMMD9-201ENST00000263401 SLC52A1Q9NWF4 448 aa13.84□□□□□ -0.19
COMMD9-201ENST00000263401 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms