RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
SEC23B-201ENST00000262544 PANK1Q8TE04 598 aa16.86■□□□□ 0.29
SEC23B-201ENST00000262544 ARXQ96QS3 562 aa16.86■□□□□ 0.29
SEC23B-201ENST00000262544 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
SEC23B-201ENST00000262544 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
SEC23B-201ENST00000262544 MAGI2Q86UL8 1455 aa16.85■□□□□ 0.29
SEC23B-201ENST00000262544 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
SEC23B-201ENST00000262544 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.84■□□□□ 0.29
SEC23B-201ENST00000262544 SLC12A5Q9H2X9 1139 aa16.83■□□□□ 0.29
SEC23B-201ENST00000262544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEC23B-201ENST00000262544 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
SEC23B-201ENST00000262544 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
SEC23B-201ENST00000262544 STK26Q9P289 416 aa16.81■□□□□ 0.28
SEC23B-201ENST00000262544 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
SEC23B-201ENST00000262544 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
SEC23B-201ENST00000262544 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
SEC23B-201ENST00000262544 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
SEC23B-201ENST00000262544 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
SEC23B-201ENST00000262544 MS4A1P11836 297 aa16.79■□□□□ 0.28
SEC23B-201ENST00000262544 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
SEC23B-201ENST00000262544 SLFN5Q08AF3 891 aa16.79■□□□□ 0.28
SEC23B-201ENST00000262544 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
SEC23B-201ENST00000262544 IGHDP01880 384 aa16.77■□□□□ 0.27
SEC23B-201ENST00000262544 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
SEC23B-201ENST00000262544 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
SEC23B-201ENST00000262544 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
SEC23B-201ENST00000262544 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
SEC23B-201ENST00000262544 U2SURPO15042 1029 aaKnown RBP16.75■□□□□ 0.27
SEC23B-201ENST00000262544 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
SEC23B-201ENST00000262544 KANK1Q14678 1352 aa16.75■□□□□ 0.27
SEC23B-201ENST00000262544 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
SEC23B-201ENST00000262544 UGGT1Q9NYU2 1555 aa16.74■□□□□ 0.27
SEC23B-201ENST00000262544 WDR7Q9Y4E6 1490 aa16.74■□□□□ 0.27
SEC23B-201ENST00000262544 DDRGK1Q96HY6 314 aa16.74■□□□□ 0.27
SEC23B-201ENST00000262544 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
SEC23B-201ENST00000262544 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
SEC23B-201ENST00000262544 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
SEC23B-201ENST00000262544 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
SEC23B-201ENST00000262544 CENPJQ9HC77 1338 aaPredicted RBP16.73■□□□□ 0.27
SEC23B-201ENST00000262544 PLCH2O75038 1416 aa16.72■□□□□ 0.27
SEC23B-201ENST00000262544 MTHFSP49914 203 aa16.72■□□□□ 0.27
SEC23B-201ENST00000262544 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
SEC23B-201ENST00000262544 C8orf34Q49A92 452 aa16.71■□□□□ 0.27
SEC23B-201ENST00000262544 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
SEC23B-201ENST00000262544 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
SEC23B-201ENST00000262544 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
SEC23B-201ENST00000262544 CABP2Q9NPB3 220 aa16.71■□□□□ 0.26
SEC23B-201ENST00000262544 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 E9PSI1 815 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 SEC24BO95487 1268 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
SEC23B-201ENST00000262544 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 E9PCH4 1651 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
SEC23B-201ENST00000262544 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
SEC23B-201ENST00000262544 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
SEC23B-201ENST00000262544 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
SEC23B-201ENST00000262544 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.69■□□□□ 0.26
SEC23B-201ENST00000262544 MYO5CQ9NQX4 1742 aa16.68■□□□□ 0.26
SEC23B-201ENST00000262544 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
SEC23B-201ENST00000262544 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
SEC23B-201ENST00000262544 ATP10AO60312 1499 aa16.66■□□□□ 0.26
SEC23B-201ENST00000262544 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
SEC23B-201ENST00000262544 RLBP1P12271 317 aa16.66■□□□□ 0.26
SEC23B-201ENST00000262544 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
SEC23B-201ENST00000262544 FBLN1P23142 703 aa16.65■□□□□ 0.26
SEC23B-201ENST00000262544 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
SEC23B-201ENST00000262544 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEC23B-201ENST00000262544 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
SEC23B-201ENST00000262544 RAPGEF3O95398 923 aa16.64■□□□□ 0.25
SEC23B-201ENST00000262544 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
SEC23B-201ENST00000262544 NOS1P29475 1434 aa16.63■□□□□ 0.25
SEC23B-201ENST00000262544 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
SEC23B-201ENST00000262544 UNC13BO14795 1591 aa16.62■□□□□ 0.25
SEC23B-201ENST00000262544 IQGAP3Q86VI3 1631 aa16.61■□□□□ 0.25
SEC23B-201ENST00000262544 FANCAO15360 1455 aa16.61■□□□□ 0.25
SEC23B-201ENST00000262544 GSE1Q14687 1217 aa16.61■□□□□ 0.25
SEC23B-201ENST00000262544 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
SEC23B-201ENST00000262544 PCDHB15Q9Y5E8 787 aa16.61■□□□□ 0.25
SEC23B-201ENST00000262544 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
SEC23B-201ENST00000262544 CFAP53Q96M91 514 aa16.61■□□□□ 0.25
SEC23B-201ENST00000262544 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
SEC23B-201ENST00000262544 ADGRL1O94910 1474 aa16.58■□□□□ 0.25
SEC23B-201ENST00000262544 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
SEC23B-201ENST00000262544 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
SEC23B-201ENST00000262544 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.24
SEC23B-201ENST00000262544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.58■□□□□ 0.243e-7■■■□□ 16.4
SEC23B-201ENST00000262544 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
SEC23B-201ENST00000262544 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.24
SEC23B-201ENST00000262544 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
SEC23B-201ENST00000262544 CLTCL1P53675 1640 aa16.57■□□□□ 0.24
SEC23B-201ENST00000262544 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
SEC23B-201ENST00000262544 GZF1Q9H116 711 aaPredicted RBP16.57■□□□□ 0.24
SEC23B-201ENST00000262544 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
SEC23B-201ENST00000262544 MFAP1P55081 439 aaKnown RBP16.56■□□□□ 0.24
SEC23B-201ENST00000262544 POGKQ9P215 609 aa16.56■□□□□ 0.24
SEC23B-201ENST00000262544 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
SEC23B-201ENST00000262544 ERVK-7P63135 1459 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms