RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 AMER1Q5JTC6 1135 aaPredicted RBP22.88■■□□□ 1.25
RHBDF1-201ENST00000262316 SLC12A5Q9H2X9 1139 aa22.88■■□□□ 1.25
RHBDF1-201ENST00000262316 SPHKAPQ2M3C7 1700 aa22.87■■□□□ 1.25
RHBDF1-201ENST00000262316 NPATQ14207 1427 aa22.87■■□□□ 1.25
RHBDF1-201ENST00000262316 SCAF11Q99590 1463 aaKnown RBP22.87■■□□□ 1.25
RHBDF1-201ENST00000262316 LRPPRCP42704 1394 aaKnown RBP22.87■■□□□ 1.25
RHBDF1-201ENST00000262316 SMG6Q86US8 1419 aaKnown RBP22.87■■□□□ 1.25
RHBDF1-201ENST00000262316 IDI1Q13907 227 aa22.86■■□□□ 1.25
RHBDF1-201ENST00000262316 CARD14Q9BXL6 1004 aa22.86■■□□□ 1.25
RHBDF1-201ENST00000262316 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
RHBDF1-201ENST00000262316 YEATS2Q9ULM3 1422 aa22.85■■□□□ 1.25
RHBDF1-201ENST00000262316 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.25
RHBDF1-201ENST00000262316 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
RHBDF1-201ENST00000262316 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
RHBDF1-201ENST00000262316 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
RHBDF1-201ENST00000262316 TET3O43151 1660 aa22.84■■□□□ 1.25
RHBDF1-201ENST00000262316 EIF2AK4Q9P2K8 1649 aaKnown RBP22.83■■□□□ 1.25
RHBDF1-201ENST00000262316 CEP152O94986 1710 aa22.82■■□□□ 1.24
RHBDF1-201ENST00000262316 RCAN3Q9UKA8 241 aa22.81■■□□□ 1.24
RHBDF1-201ENST00000262316 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
RHBDF1-201ENST00000262316 EXOC6Q8TAG9 804 aa22.8■■□□□ 1.24
RHBDF1-201ENST00000262316 PPRC1Q5VV67 1664 aaKnown RBP22.8■■□□□ 1.24
RHBDF1-201ENST00000262316 CENPJQ9HC77 1338 aaPredicted RBP22.8■■□□□ 1.24
RHBDF1-201ENST00000262316 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
RHBDF1-201ENST00000262316 DEPDC5O75140 1603 aa22.79■■□□□ 1.24
RHBDF1-201ENST00000262316 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
RHBDF1-201ENST00000262316 NEUROD2Q15784 382 aa22.78■■□□□ 1.24
RHBDF1-201ENST00000262316 VWDEQ8N2E2 1590 aa22.78■■□□□ 1.24
RHBDF1-201ENST00000262316 CABP2Q9NPB3 220 aa22.77■■□□□ 1.24
RHBDF1-201ENST00000262316 EFCAB6Q5THR3 1501 aa22.76■■□□□ 1.23
RHBDF1-201ENST00000262316 FRMPD1Q5SYB0 1578 aa22.76■■□□□ 1.23
RHBDF1-201ENST00000262316 C14orf93Q9H972 538 aaKnown RBP22.76■■□□□ 1.23
RHBDF1-201ENST00000262316 STAC3Q96MF2 364 aa22.75■■□□□ 1.23
RHBDF1-201ENST00000262316 RNF17Q9BXT8 1623 aaKnown RBP22.74■■□□□ 1.23
RHBDF1-201ENST00000262316 RRP1P56182 461 aaKnown RBP22.73■■□□□ 1.23
RHBDF1-201ENST00000262316 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
RHBDF1-201ENST00000262316 APAF1O14727 1248 aa22.73■■□□□ 1.23
RHBDF1-201ENST00000262316 SKAP1Q86WV1 359 aa22.72■■□□□ 1.23
RHBDF1-201ENST00000262316 MROH2AA6NES4 1674 aa22.72■■□□□ 1.23
RHBDF1-201ENST00000262316 ABCA6Q8N139 1617 aa22.71■■□□□ 1.23
RHBDF1-201ENST00000262316 MINK1Q8N4C8 1332 aaPredicted RBP22.71■■□□□ 1.23
RHBDF1-201ENST00000262316 RRP7AQ9Y3A4 280 aaKnown RBP22.7■■□□□ 1.22
RHBDF1-201ENST00000262316 ERVK-7P63135 1459 aa22.7■■□□□ 1.22
RHBDF1-201ENST00000262316 MORC1Q86VD1 984 aa22.7■■□□□ 1.22
RHBDF1-201ENST00000262316 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
RHBDF1-201ENST00000262316 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
RHBDF1-201ENST00000262316 SRPK2P78362 688 aaKnown RBP22.68■■□□□ 1.22
RHBDF1-201ENST00000262316 ERICH6BQ5W0A0 696 aa22.68■■□□□ 1.22
RHBDF1-201ENST00000262316 C20orf194Q5TEA3 1177 aa22.67■■□□□ 1.22
RHBDF1-201ENST00000262316 LAMC1P11047 1609 aa22.67■■□□□ 1.22
RHBDF1-201ENST00000262316 KIF1BO60333 1816 aa22.67■■□□□ 1.22
RHBDF1-201ENST00000262316 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
RHBDF1-201ENST00000262316 MAP3K4Q9Y6R4 1608 aa22.67■■□□□ 1.22
RHBDF1-201ENST00000262316 IQGAP1P46940 1657 aa22.67■■□□□ 1.22
RHBDF1-201ENST00000262316 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
RHBDF1-201ENST00000262316 SPINK5Q9NQ38 1064 aaPredicted RBP22.66■■□□□ 1.22
RHBDF1-201ENST00000262316 ABCC3O15438 1527 aa22.66■■□□□ 1.22
RHBDF1-201ENST00000262316 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.21
RHBDF1-201ENST00000262316 POGKQ9P215 609 aa22.64■■□□□ 1.21
RHBDF1-201ENST00000262316 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
RHBDF1-201ENST00000262316 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
RHBDF1-201ENST00000262316 PRAM1Q96QH2 718 aa22.62■■□□□ 1.21
RHBDF1-201ENST00000262316 CRBNQ96SW2 442 aa22.62■■□□□ 1.21
RHBDF1-201ENST00000262316 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
RHBDF1-201ENST00000262316 NEO1Q92859 1461 aa22.61■■□□□ 1.21
RHBDF1-201ENST00000262316 MYOM2P54296 1465 aa22.6■■□□□ 1.21
RHBDF1-201ENST00000262316 MSH5O43196 834 aa22.6■■□□□ 1.21
RHBDF1-201ENST00000262316 PDE3BQ13370 1112 aa22.6■■□□□ 1.21
RHBDF1-201ENST00000262316 FBLN1P23142 703 aa22.59■■□□□ 1.21
RHBDF1-201ENST00000262316 MTHFSP49914 203 aa22.59■■□□□ 1.21
RHBDF1-201ENST00000262316 GGNBP2Q9H3C7 697 aa22.59■■□□□ 1.21
RHBDF1-201ENST00000262316 PIK3C2GO75747 1445 aa22.59■■□□□ 1.21
RHBDF1-201ENST00000262316 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
RHBDF1-201ENST00000262316 DIP2CQ9Y2E4 1556 aa22.58■■□□□ 1.21
RHBDF1-201ENST00000262316 GOLGA2Q08379 1002 aa22.58■■□□□ 1.2
RHBDF1-201ENST00000262316 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
RHBDF1-201ENST00000262316 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
RHBDF1-201ENST00000262316 SIGLEC1Q9BZZ2 1709 aa22.56■■□□□ 1.2
RHBDF1-201ENST00000262316 RPGRIP1LQ68CZ1 1315 aa22.56■■□□□ 1.2
RHBDF1-201ENST00000262316 SLC52A1Q9NWF4 448 aa22.56■■□□□ 1.2
RHBDF1-201ENST00000262316 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
RHBDF1-201ENST00000262316 EVC2Q86UK5 1308 aa22.55■■□□□ 1.2
RHBDF1-201ENST00000262316 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
RHBDF1-201ENST00000262316 ESF1Q9H501 851 aaKnown RBP22.54■■□□□ 1.2
RHBDF1-201ENST00000262316 CFAP74Q9C0B2 1584 aa22.53■■□□□ 1.2
RHBDF1-201ENST00000262316 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
RHBDF1-201ENST00000262316 BCAR3O75815 825 aa22.52■■□□□ 1.2
RHBDF1-201ENST00000262316 SYNMO15061 1565 aa22.52■■□□□ 1.2
RHBDF1-201ENST00000262316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
RHBDF1-201ENST00000262316 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
RHBDF1-201ENST00000262316 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
RHBDF1-201ENST00000262316 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
RHBDF1-201ENST00000262316 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
RHBDF1-201ENST00000262316 MYOM1P52179 1685 aa22.5■■□□□ 1.19
RHBDF1-201ENST00000262316 NRXN1Q9ULB1 1477 aa22.5■■□□□ 1.19
RHBDF1-201ENST00000262316 U2SURPO15042 1029 aaKnown RBP22.5■■□□□ 1.19
RHBDF1-201ENST00000262316 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
RHBDF1-201ENST00000262316 SLC24A1O60721 1099 aa22.49■■□□□ 1.19
RHBDF1-201ENST00000262316 CAMSAP1Q5T5Y3 1602 aa22.49■■□□□ 1.19
RHBDF1-201ENST00000262316 NUTM2FA1L443 756 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms