RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 KTN1Q86UP2 1357 aaKnown RBP12.46□□□□□ -0.41
PKD1-201ENST00000262304 NUP155O75694 1391 aa12.46□□□□□ -0.42
PKD1-201ENST00000262304 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
PKD1-201ENST00000262304 PMFBP1Q8TBY8 1022 aa12.45□□□□□ -0.42
PKD1-201ENST00000262304 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
PKD1-201ENST00000262304 PDE4AP27815 886 aa12.45□□□□□ -0.42
PKD1-201ENST00000262304 ZFYVE27Q5T4F4 411 aa12.45□□□□□ -0.42
PKD1-201ENST00000262304 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 ANO2Q9NQ90 1003 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 FAM193AP78312 1265 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 HSP90AB2PQ58FF8 381 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 AKAP17AQ02040 695 aaKnown RBP12.44□□□□□ -0.42
PKD1-201ENST00000262304 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
PKD1-201ENST00000262304 SPC24Q8NBT2 197 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
PKD1-201ENST00000262304 FHOD3Q2V2M9 1422 aa12.43□□□□□ -0.42
PKD1-201ENST00000262304 CT47A1Q5JQC4 288 aaPredicted RBP12.43□□□□□ -0.42
PKD1-201ENST00000262304 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
PKD1-201ENST00000262304 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
PKD1-201ENST00000262304 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
PKD1-201ENST00000262304 KIF3BO15066 747 aa12.42□□□□□ -0.42
PKD1-201ENST00000262304 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
PKD1-201ENST00000262304 VPS37CA5D8V6 355 aaPredicted RBP12.42□□□□□ -0.42
PKD1-201ENST00000262304 SPAG9O60271 1321 aaKnown RBP12.42□□□□□ -0.42
PKD1-201ENST00000262304 HSP90B2PQ58FF3 399 aa12.42□□□□□ -0.42
PKD1-201ENST00000262304 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
PKD1-201ENST00000262304 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
PKD1-201ENST00000262304 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
PKD1-201ENST00000262304 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
PKD1-201ENST00000262304 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
PKD1-201ENST00000262304 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
PKD1-201ENST00000262304 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
PKD1-201ENST00000262304 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
PKD1-201ENST00000262304 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
PKD1-201ENST00000262304 TRIM34Q9BYJ4 488 aa12.41□□□□□ -0.42
PKD1-201ENST00000262304 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
PKD1-201ENST00000262304 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
PKD1-201ENST00000262304 EID1Q9Y6B2 187 aa12.4□□□□□ -0.42
PKD1-201ENST00000262304 MPHOSPH9Q99550 1183 aa12.4□□□□□ -0.42
PKD1-201ENST00000262304 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
PKD1-201ENST00000262304 EXOC6Q8TAG9 804 aa12.4□□□□□ -0.42
PKD1-201ENST00000262304 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.43
PKD1-201ENST00000262304 WASHC2CQ9Y4E1 1318 aa12.39□□□□□ -0.43
PKD1-201ENST00000262304 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
PKD1-201ENST00000262304 CENPJQ9HC77 1338 aaPredicted RBP12.39□□□□□ -0.43
PKD1-201ENST00000262304 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
PKD1-201ENST00000262304 ANKRD62A6NC57 917 aa12.39□□□□□ -0.43
PKD1-201ENST00000262304 HMMRO75330 724 aa12.39□□□□□ -0.43
PKD1-201ENST00000262304 KIF3AQ9Y496 699 aa12.39□□□□□ -0.43
PKD1-201ENST00000262304 SMC2O95347 1197 aa12.38□□□□□ -0.43
PKD1-201ENST00000262304 CCDC43Q96MW1 224 aaKnown RBP12.38□□□□□ -0.43
PKD1-201ENST00000262304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
PKD1-201ENST00000262304 CTDP1Q9Y5B0 961 aaPredicted RBP12.38□□□□□ -0.43
PKD1-201ENST00000262304 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
PKD1-201ENST00000262304 NUTM2DQ5VT03 806 aaPredicted RBP12.38□□□□□ -0.43
PKD1-201ENST00000262304 ARGLU1Q9NWB6 273 aaPredicted RBP12.38□□□□□ -0.43
PKD1-201ENST00000262304 ODF2Q5BJF6 829 aa12.38□□□□□ -0.43
PKD1-201ENST00000262304 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
PKD1-201ENST00000262304 MYO10Q9HD67 2058 aa12.38□□□□□ -0.43
PKD1-201ENST00000262304 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
PKD1-201ENST00000262304 TNNT1P13805 278 aa12.37□□□□□ -0.43
PKD1-201ENST00000262304 TICAM2Q86XR7 235 aa12.37□□□□□ -0.43
PKD1-201ENST00000262304 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
PKD1-201ENST00000262304 FYB1O15117 783 aa12.37□□□□□ -0.43
PKD1-201ENST00000262304 NEFHP12036 1026 aa12.37□□□□□ -0.43
PKD1-201ENST00000262304 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
PKD1-201ENST00000262304 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
PKD1-201ENST00000262304 FMNL2Q96PY5 1086 aa12.36□□□□□ -0.43
PKD1-201ENST00000262304 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
PKD1-201ENST00000262304 SASS6Q6UVJ0 657 aa12.36□□□□□ -0.43
PKD1-201ENST00000262304 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
PKD1-201ENST00000262304 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
PKD1-201ENST00000262304 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 GPATCH11Q8N954 259 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 FAM177A1Q8N128 213 aaPredicted RBP12.35□□□□□ -0.43
PKD1-201ENST00000262304 PAF1Q8N7H5 531 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
PKD1-201ENST00000262304 CT47B1P0C2W7 299 aaPredicted RBP12.34□□□□□ -0.43
PKD1-201ENST00000262304 EPS15P42566 896 aa12.34□□□□□ -0.43
PKD1-201ENST00000262304 ENOX2Q16206 610 aaKnown RBP12.34□□□□□ -0.43
PKD1-201ENST00000262304 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
PKD1-201ENST00000262304 ACBD3Q9H3P7 528 aa12.34□□□□□ -0.43
PKD1-201ENST00000262304 TRIM29Q14134 588 aa12.34□□□□□ -0.43
PKD1-201ENST00000262304 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
PKD1-201ENST00000262304 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.43
PKD1-201ENST00000262304 LEKR1Q6ZMV7 388 aa12.33□□□□□ -0.44
PKD1-201ENST00000262304 CAVIN1Q6NZI2 390 aaKnown RBP12.33□□□□□ -0.44
PKD1-201ENST00000262304 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
PKD1-201ENST00000262304 PTPRGP23470 1445 aa12.33□□□□□ -0.44
PKD1-201ENST00000262304 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
PKD1-201ENST00000262304 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
PKD1-201ENST00000262304 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
PKD1-201ENST00000262304 CCDC39Q9UFE4 941 aa12.32□□□□□ -0.44
PKD1-201ENST00000262304 CEBPZQ03701 1054 aaKnown RBP12.32□□□□□ -0.44
PKD1-201ENST00000262304 E9PSI1 815 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms