RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ZNF518AQ6AHZ1 1483 aa30.07■■■□□ 2.4
MCF2L-201ENST00000261963 RTL5Q5HYW3 569 aaPredicted RBP30.07■■■□□ 2.4
MCF2L-201ENST00000261963 ZMYM4Q5VZL5 1548 aa30.07■■■□□ 2.4
MCF2L-201ENST00000261963 BLMP54132 1417 aaPredicted RBP30.07■■■□□ 2.4
MCF2L-201ENST00000261963 KIAA1210Q9ULL0 1709 aa30.06■■■□□ 2.4
MCF2L-201ENST00000261963 ANP32AP39687 249 aaKnown RBP30.06■■■□□ 2.4
MCF2L-201ENST00000261963 SALL2Q9Y467 1007 aaPredicted RBP30.06■■■□□ 2.4
MCF2L-201ENST00000261963 IPO9Q96P70 1041 aaKnown RBP30.05■■■□□ 2.4
MCF2L-201ENST00000261963 ANO8Q9HCE9 1232 aaPredicted RBP30.05■■■□□ 2.4
MCF2L-201ENST00000261963 MYOM2P54296 1465 aa30.04■■■□□ 2.4
MCF2L-201ENST00000261963 PPRC1Q5VV67 1664 aaKnown RBP30.04■■■□□ 2.4
MCF2L-201ENST00000261963 SYNMO15061 1565 aa30.03■■■□□ 2.4
MCF2L-201ENST00000261963 PDE3BQ13370 1112 aa30.03■■■□□ 2.4
MCF2L-201ENST00000261963 LMTK2Q8IWU2 1503 aa30.03■■■□□ 2.4
MCF2L-201ENST00000261963 CDCA8Q53HL2 280 aa30.03■■■□□ 2.4
MCF2L-201ENST00000261963 AMER1Q5JTC6 1135 aaPredicted RBP30.02■■■□□ 2.4
MCF2L-201ENST00000261963 MAP3K4Q9Y6R4 1608 aa30.02■■■□□ 2.4
MCF2L-201ENST00000261963 EIF3AQ14152 1382 aaKnown RBP30.01■■■□□ 2.4
MCF2L-201ENST00000261963 ADGRF5Q8IZF2 1346 aa30.01■■■□□ 2.39
MCF2L-201ENST00000261963 KNSTRNQ9Y448 316 aa30.01■■■□□ 2.39
MCF2L-201ENST00000261963 CFAP70Q5T0N1 1121 aa30■■■□□ 2.39
MCF2L-201ENST00000261963 OSCARQ8IYS5 282 aa30■■■□□ 2.39
MCF2L-201ENST00000261963 NPM1P06748 294 aaKnown RBP eCLIP30■■■□□ 2.39
MCF2L-201ENST00000261963 ABCA6Q8N139 1617 aa30■■■□□ 2.39
MCF2L-201ENST00000261963 ZBTB47Q9UFB7 747 aaPredicted RBP29.98■■■□□ 2.39
MCF2L-201ENST00000261963 POGZQ7Z3K3 1410 aa29.98■■■□□ 2.39
MCF2L-201ENST00000261963 RRP1P56182 461 aaKnown RBP29.98■■■□□ 2.39
MCF2L-201ENST00000261963 CD109Q6YHK3 1445 aa29.98■■■□□ 2.39
MCF2L-201ENST00000261963 CCDC136Q96JN2 1154 aa29.97■■■□□ 2.39
MCF2L-201ENST00000261963 RCAN3Q9UKA8 241 aa29.97■■■□□ 2.39
MCF2L-201ENST00000261963 MYOM1P52179 1685 aa29.97■■■□□ 2.39
MCF2L-201ENST00000261963 CDCA7LQ96GN5 454 aa29.96■■■□□ 2.39
MCF2L-201ENST00000261963 KIF1BO60333 1816 aa29.96■■■□□ 2.39
MCF2L-201ENST00000261963 PPP2R1AP30153 589 aa29.96■■■□□ 2.39
MCF2L-201ENST00000261963 MROH2AA6NES4 1674 aa29.95■■■□□ 2.39
MCF2L-201ENST00000261963 FRMPD1Q5SYB0 1578 aa29.95■■■□□ 2.39
MCF2L-201ENST00000261963 IFT172Q9UG01 1749 aa29.95■■■□□ 2.39
MCF2L-201ENST00000261963 NRXN1Q9ULB1 1477 aa29.95■■■□□ 2.38
MCF2L-201ENST00000261963 MLH3Q9UHC1 1453 aa29.93■■■□□ 2.38
MCF2L-201ENST00000261963 ASXL1Q8IXJ9 1541 aa29.93■■■□□ 2.38
MCF2L-201ENST00000261963 CFAP74Q9C0B2 1584 aa29.91■■■□□ 2.38
MCF2L-201ENST00000261963 ADAMTS8Q9UP79 889 aa29.91■■■□□ 2.38
MCF2L-201ENST00000261963 ADGRB3O60242 1522 aa29.9■■■□□ 2.38
MCF2L-201ENST00000261963 ERVK-7P63135 1459 aa29.9■■■□□ 2.38
MCF2L-201ENST00000261963 NPATQ14207 1427 aa29.89■■■□□ 2.38
MCF2L-201ENST00000261963 NPC1L1Q9UHC9 1359 aa29.89■■■□□ 2.38
MCF2L-201ENST00000261963 KDM5AP29375 1690 aaKnown RBP29.88■■■□□ 2.37
MCF2L-201ENST00000261963 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
MCF2L-201ENST00000261963 NOS1P29475 1434 aa29.86■■■□□ 2.37
MCF2L-201ENST00000261963 PIK3C2GO75747 1445 aa29.84■■■□□ 2.37
MCF2L-201ENST00000261963 EXOC6Q8TAG9 804 aa29.84■■■□□ 2.37
MCF2L-201ENST00000261963 GGT6Q6P531 493 aa29.83■■■□□ 2.37
MCF2L-201ENST00000261963 SLC24A1O60721 1099 aa29.83■■■□□ 2.37
MCF2L-201ENST00000261963 MYO3AQ8NEV4 1616 aa29.81■■■□□ 2.36
MCF2L-201ENST00000261963 SBNO2Q9Y2G9 1366 aa29.79■■■□□ 2.36
MCF2L-201ENST00000261963 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
MCF2L-201ENST00000261963 WDR43Q15061 677 aaKnown RBP eCLIP29.79■■■□□ 2.36
MCF2L-201ENST00000261963 ABCC3O15438 1527 aa29.79■■■□□ 2.36
MCF2L-201ENST00000261963 IL27Q8NEV9 243 aa29.79■■■□□ 2.36
MCF2L-201ENST00000261963 SETBP1Q9Y6X0 1596 aa29.78■■■□□ 2.36
MCF2L-201ENST00000261963 PLEKHH1Q9ULM0 1364 aa29.77■■■□□ 2.36
MCF2L-201ENST00000261963 CARD14Q9BXL6 1004 aa29.76■■■□□ 2.36
MCF2L-201ENST00000261963 NEO1Q92859 1461 aa29.75■■■□□ 2.35
MCF2L-201ENST00000261963 PPLO60437 1756 aa29.74■■■□□ 2.35
MCF2L-201ENST00000261963 CFAP65Q6ZU64 1925 aaKnown RBP29.74■■■□□ 2.35
MCF2L-201ENST00000261963 RAPGEF3O95398 923 aa29.74■■■□□ 2.35
MCF2L-201ENST00000261963 C14orf93Q9H972 538 aaKnown RBP29.73■■■□□ 2.35
MCF2L-201ENST00000261963 CENPJQ9HC77 1338 aaPredicted RBP29.73■■■□□ 2.35
MCF2L-201ENST00000261963 ZNF521Q96K83 1311 aa29.72■■■□□ 2.35
MCF2L-201ENST00000261963 ADGRB1O14514 1584 aa29.72■■■□□ 2.35
MCF2L-201ENST00000261963 PLIN1O60240 522 aa29.7■■■□□ 2.34
MCF2L-201ENST00000261963 RPGRIP1LQ68CZ1 1315 aa29.68■■■□□ 2.34
MCF2L-201ENST00000261963 TRAK1Q9UPV9 953 aa29.68■■■□□ 2.34
MCF2L-201ENST00000261963 CAMSAP1Q5T5Y3 1602 aa29.67■■■□□ 2.34
MCF2L-201ENST00000261963 USP35Q9P2H5 1018 aa29.67■■■□□ 2.34
MCF2L-201ENST00000261963 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
MCF2L-201ENST00000261963 DUSP27Q5VZP5 1158 aa29.66■■■□□ 2.34
MCF2L-201ENST00000261963 DIP2CQ9Y2E4 1556 aa29.66■■■□□ 2.34
MCF2L-201ENST00000261963 RTN4Q9NQC3 1192 aaKnown RBP29.65■■■□□ 2.34
MCF2L-201ENST00000261963 TMEM132EQ6IEE7 984 aa29.64■■■□□ 2.34
MCF2L-201ENST00000261963 ZC3H13Q5T200 1668 aaKnown RBP29.63■■■□□ 2.33
MCF2L-201ENST00000261963 PIK3C2BO00750 1634 aa29.62■■■□□ 2.33
MCF2L-201ENST00000261963 GOLGA2Q08379 1002 aa29.61■■■□□ 2.33
MCF2L-201ENST00000261963 CCDC146Q8IYE0 955 aa29.61■■■□□ 2.33
MCF2L-201ENST00000261963 QRICH2Q9H0J4 1663 aa29.6■■■□□ 2.33
MCF2L-201ENST00000261963 NEFMP07197 916 aa29.6■■■□□ 2.33
MCF2L-201ENST00000261963 CRBNQ96SW2 442 aa29.6■■■□□ 2.33
MCF2L-201ENST00000261963 NPM2Q86SE8 214 aaKnown RBP29.58■■■□□ 2.33
MCF2L-201ENST00000261963 RICTORQ6R327 1708 aa29.57■■■□□ 2.32
MCF2L-201ENST00000261963 ARHGAP31Q2M1Z3 1444 aa29.57■■■□□ 2.32
MCF2L-201ENST00000261963 NSD3Q9BZ95 1437 aa29.57■■■□□ 2.32
MCF2L-201ENST00000261963 SLFN5Q08AF3 891 aa29.56■■■□□ 2.32
MCF2L-201ENST00000261963 NEXMIFQ5QGS0 1516 aa29.56■■■□□ 2.32
MCF2L-201ENST00000261963 SLC12A5Q9H2X9 1139 aa29.56■■■□□ 2.32
MCF2L-201ENST00000261963 C20orf194Q5TEA3 1177 aa29.55■■■□□ 2.32
MCF2L-201ENST00000261963 APAF1O14727 1248 aa29.55■■■□□ 2.32
MCF2L-201ENST00000261963 YEATS2Q9ULM3 1422 aa29.55■■■□□ 2.32
MCF2L-201ENST00000261963 TCERG1O14776 1098 aaKnown RBP29.54■■■□□ 2.32
MCF2L-201ENST00000261963 NUTM2DQ5VT03 806 aaPredicted RBP29.54■■■□□ 2.32
MCF2L-201ENST00000261963 TRMT2AQ8IZ69 625 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms