RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 LMOD2Q6P5Q4 547 aa13.25□□□□□ -0.29
CSNK1A1-201ENST00000261798 TEX35Q5T0J7 233 aa13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 TPM3P06753 285 aa13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
CSNK1A1-201ENST00000261798 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
CSNK1A1-201ENST00000261798 ESPNB1AK53 854 aa13.23□□□□□ -0.29
CSNK1A1-201ENST00000261798 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
CSNK1A1-201ENST00000261798 H3BQV1 296 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 MBD3O95983 291 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 GRPEL1Q9HAV7 217 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 KIF3BO15066 747 aa13.22□□□□□ -0.29
CSNK1A1-201ENST00000261798 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
CSNK1A1-201ENST00000261798 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
CSNK1A1-201ENST00000261798 CDC45O75419 566 aa13.21□□□□□ -0.3
CSNK1A1-201ENST00000261798 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.3
CSNK1A1-201ENST00000261798 CCDC184Q52MB2 194 aa13.2□□□□□ -0.3
CSNK1A1-201ENST00000261798 NOC3LQ8WTT2 800 aaKnown RBP13.2□□□□□ -0.3
CSNK1A1-201ENST00000261798 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
CSNK1A1-201ENST00000261798 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
CSNK1A1-201ENST00000261798 MCM4P33991 863 aa13.2□□□□□ -0.3
CSNK1A1-201ENST00000261798 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
CSNK1A1-201ENST00000261798 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 RBM10P98175 930 aaKnown RBP13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
CSNK1A1-201ENST00000261798 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
CSNK1A1-201ENST00000261798 CUX1P39880 1505 aa13.18□□□□□ -0.3
CSNK1A1-201ENST00000261798 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
CSNK1A1-201ENST00000261798 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 HOMER1Q86YM7 354 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 IGF1RP08069 1367 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 RIPK4P57078 832 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
CSNK1A1-201ENST00000261798 EVC2Q86UK5 1308 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 WDR97A6NE52 1622 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 RABEP1Q15276 862 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
CSNK1A1-201ENST00000261798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSNK1A1-201ENST00000261798 ARAP1Q96P48 1450 aa13.15□□□□□ -0.3
CSNK1A1-201ENST00000261798 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
CSNK1A1-201ENST00000261798 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
CSNK1A1-201ENST00000261798 LETM1O95202 739 aaPredicted RBP13.14□□□□□ -0.31
CSNK1A1-201ENST00000261798 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
CSNK1A1-201ENST00000261798 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
CSNK1A1-201ENST00000261798 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
CSNK1A1-201ENST00000261798 TPM1P09493 284 aa13.13□□□□□ -0.31
CSNK1A1-201ENST00000261798 MCM2P49736 904 aa13.13□□□□□ -0.31
CSNK1A1-201ENST00000261798 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
CSNK1A1-201ENST00000261798 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
CSNK1A1-201ENST00000261798 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
CSNK1A1-201ENST00000261798 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
CSNK1A1-201ENST00000261798 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 TCP11L2Q8N4U5 519 aa13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 GNAI1P63096 354 aa13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 BCAR3O75815 825 aa13.12□□□□□ -0.31
CSNK1A1-201ENST00000261798 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 UQCRHP07919 91 aa13.11□□□□□ -0.31
CSNK1A1-201ENST00000261798 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 TPD52L1Q16890 204 aaPredicted RBP13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 CCDC73Q6ZRK6 1079 aa13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
CSNK1A1-201ENST00000261798 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
CSNK1A1-201ENST00000261798 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
CSNK1A1-201ENST00000261798 NEK4P51957 841 aa13.09□□□□□ -0.31
CSNK1A1-201ENST00000261798 GCC1Q96CN9 775 aa13.09□□□□□ -0.31
CSNK1A1-201ENST00000261798 AMPHP49418 695 aa13.09□□□□□ -0.31
CSNK1A1-201ENST00000261798 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
CSNK1A1-201ENST00000261798 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.31
CSNK1A1-201ENST00000261798 NPHP1O15259 732 aa13.08□□□□□ -0.31
CSNK1A1-201ENST00000261798 TRIM5Q9C035 493 aa13.08□□□□□ -0.31
CSNK1A1-201ENST00000261798 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 325.4 ms