RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SCAF11Q99590 1463 aaKnown RBP21.61■■□□□ 1.05
TM9SF1-201ENST00000261789 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
TM9SF1-201ENST00000261789 PTPRTO14522 1441 aa21.6■■□□□ 1.05
TM9SF1-201ENST00000261789 CFAP70Q5T0N1 1121 aa21.6■■□□□ 1.05
TM9SF1-201ENST00000261789 INSRP06213 1382 aa21.59■■□□□ 1.05
TM9SF1-201ENST00000261789 CCDC146Q8IYE0 955 aa21.59■■□□□ 1.05
TM9SF1-201ENST00000261789 CEP152O94986 1710 aa21.59■■□□□ 1.05
TM9SF1-201ENST00000261789 RTEL1-TNFRSF6BF6WH68 1400 aa21.59■■□□□ 1.05
TM9SF1-201ENST00000261789 ARAP3Q8WWN8 1544 aa21.57■■□□□ 1.04
TM9SF1-201ENST00000261789 SCAPERQ9BY12 1400 aa21.57■■□□□ 1.04
TM9SF1-201ENST00000261789 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
TM9SF1-201ENST00000261789 DUSP27Q5VZP5 1158 aa21.57■■□□□ 1.04
TM9SF1-201ENST00000261789 UGGT1Q9NYU2 1555 aa21.57■■□□□ 1.04
TM9SF1-201ENST00000261789 DEKP35659 375 aaKnown RBP21.55■■□□□ 1.04
TM9SF1-201ENST00000261789 BACH2Q9BYV9 841 aa21.55■■□□□ 1.04
TM9SF1-201ENST00000261789 ADGRF5Q8IZF2 1346 aa21.55■■□□□ 1.04
TM9SF1-201ENST00000261789 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
TM9SF1-201ENST00000261789 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
TM9SF1-201ENST00000261789 FANCAO15360 1455 aa21.55■■□□□ 1.04
TM9SF1-201ENST00000261789 KANK1Q14678 1352 aa21.54■■□□□ 1.04
TM9SF1-201ENST00000261789 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
TM9SF1-201ENST00000261789 SYNMO15061 1565 aa21.53■■□□□ 1.04
TM9SF1-201ENST00000261789 ATP7AQ04656 1500 aa21.53■■□□□ 1.04
TM9SF1-201ENST00000261789 DEPDC5O75140 1603 aa21.53■■□□□ 1.04
TM9SF1-201ENST00000261789 TET3O43151 1660 aa21.52■■□□□ 1.04
TM9SF1-201ENST00000261789 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
TM9SF1-201ENST00000261789 MYOM1P52179 1685 aa21.52■■□□□ 1.03
TM9SF1-201ENST00000261789 ZNF521Q96K83 1311 aa21.51■■□□□ 1.03
TM9SF1-201ENST00000261789 SPINK5Q9NQ38 1064 aaPredicted RBP21.5■■□□□ 1.03
TM9SF1-201ENST00000261789 APAF1O14727 1248 aa21.49■■□□□ 1.03
TM9SF1-201ENST00000261789 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
TM9SF1-201ENST00000261789 CARD14Q9BXL6 1004 aa21.49■■□□□ 1.03
TM9SF1-201ENST00000261789 EIF3AQ14152 1382 aaKnown RBP21.49■■□□□ 1.03
TM9SF1-201ENST00000261789 MS4A1P11836 297 aa21.49■■□□□ 1.03
TM9SF1-201ENST00000261789 ADGRL1O94910 1474 aa21.48■■□□□ 1.03
TM9SF1-201ENST00000261789 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
TM9SF1-201ENST00000261789 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
TM9SF1-201ENST00000261789 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
TM9SF1-201ENST00000261789 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
TM9SF1-201ENST00000261789 VWDEQ8N2E2 1590 aa21.46■■□□□ 1.03
TM9SF1-201ENST00000261789 ERVK-7P63135 1459 aa21.45■■□□□ 1.02
TM9SF1-201ENST00000261789 KDM5AP29375 1690 aaKnown RBP21.44■■□□□ 1.02
TM9SF1-201ENST00000261789 DMRT2Q9Y5R5 561 aa21.44■■□□□ 1.02
TM9SF1-201ENST00000261789 ABCA6Q8N139 1617 aa21.43■■□□□ 1.02
TM9SF1-201ENST00000261789 MROH1Q8NDA8 1641 aa21.43■■□□□ 1.02
TM9SF1-201ENST00000261789 KDM2BQ8NHM5 1336 aa21.43■■□□□ 1.02
TM9SF1-201ENST00000261789 LAS1LQ9Y4W2 734 aaKnown RBP21.43■■□□□ 1.02
TM9SF1-201ENST00000261789 MAP3K4Q9Y6R4 1608 aa21.42■■□□□ 1.02
TM9SF1-201ENST00000261789 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
TM9SF1-201ENST00000261789 NPC1L1Q9UHC9 1359 aa21.41■■□□□ 1.02
TM9SF1-201ENST00000261789 BCAR3O75815 825 aa21.41■■□□□ 1.02
TM9SF1-201ENST00000261789 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
TM9SF1-201ENST00000261789 CFAP65Q6ZU64 1925 aaKnown RBP21.4■■□□□ 1.02
TM9SF1-201ENST00000261789 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
TM9SF1-201ENST00000261789 KIAA1210Q9ULL0 1709 aa21.39■■□□□ 1.01
TM9SF1-201ENST00000261789 TRMT2AQ8IZ69 625 aaKnown RBP21.38■■□□□ 1.01
TM9SF1-201ENST00000261789 MROH2AA6NES4 1674 aa21.38■■□□□ 1.01
TM9SF1-201ENST00000261789 RTL5Q5HYW3 569 aaPredicted RBP21.38■■□□□ 1.01
TM9SF1-201ENST00000261789 KIF1BO60333 1816 aa21.37■■□□□ 1.01
TM9SF1-201ENST00000261789 NOS1P29475 1434 aa21.37■■□□□ 1.01
TM9SF1-201ENST00000261789 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
TM9SF1-201ENST00000261789 MYOM2P54296 1465 aa21.37■■□□□ 1.01
TM9SF1-201ENST00000261789 GGT6Q6P531 493 aa21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 PPRC1Q5VV67 1664 aaKnown RBP21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
TM9SF1-201ENST00000261789 SLC12A5Q9H2X9 1139 aa21.35■■□□□ 1.01
TM9SF1-201ENST00000261789 KIDINS220Q9ULH0 1771 aa21.34■■□□□ 1.01
TM9SF1-201ENST00000261789 NEUROD2Q15784 382 aa21.34■■□□□ 1.01
TM9SF1-201ENST00000261789 CENPJQ9HC77 1338 aaPredicted RBP21.34■■□□□ 1.01
TM9SF1-201ENST00000261789 RGS3P49796 1198 aa21.33■■□□□ 1.01
TM9SF1-201ENST00000261789 NUTM2DQ5VT03 806 aaPredicted RBP21.33■■□□□ 1.01
TM9SF1-201ENST00000261789 NKTRP30414 1462 aaKnown RBP21.33■■□□□ 1.01
TM9SF1-201ENST00000261789 SLC4A3P48751 1232 aa21.32■■□□□ 1
TM9SF1-201ENST00000261789 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
TM9SF1-201ENST00000261789 E9PSI1 815 aa21.31■■□□□ 1
TM9SF1-201ENST00000261789 RRP7AQ9Y3A4 280 aaKnown RBP21.31■■□□□ 1
TM9SF1-201ENST00000261789 IFT172Q9UG01 1749 aa21.31■■□□□ 1
TM9SF1-201ENST00000261789 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
TM9SF1-201ENST00000261789 SLC24A1O60721 1099 aa21.3■■□□□ 1
TM9SF1-201ENST00000261789 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
TM9SF1-201ENST00000261789 NEFMP07197 916 aa21.29■■□□□ 1
TM9SF1-201ENST00000261789 MORC1Q86VD1 984 aa21.29■■□□□ 1
TM9SF1-201ENST00000261789 CD109Q6YHK3 1445 aa21.29■■□□□ 1
TM9SF1-201ENST00000261789 WWC1Q8IX03 1113 aa21.29■■□□□ 1
TM9SF1-201ENST00000261789 NRXN1Q9ULB1 1477 aa21.28■■□□□ 1
TM9SF1-201ENST00000261789 C8orf34Q49A92 452 aa21.28■■□□□ 1
TM9SF1-201ENST00000261789 NPATQ14207 1427 aa21.27■■□□□ 1
TM9SF1-201ENST00000261789 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
TM9SF1-201ENST00000261789 C14orf93Q9H972 538 aaKnown RBP21.26■□□□□ 0.99
TM9SF1-201ENST00000261789 CFAP74Q9C0B2 1584 aa21.26■□□□□ 0.99
TM9SF1-201ENST00000261789 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
TM9SF1-201ENST00000261789 ADGRB3O60242 1522 aa21.25■□□□□ 0.99
TM9SF1-201ENST00000261789 IGHDP01880 384 aa21.25■□□□□ 0.99
TM9SF1-201ENST00000261789 FAM161AQ3B820 660 aa21.24■□□□□ 0.99
TM9SF1-201ENST00000261789 PANK1Q8TE04 598 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms