RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SMAP1Q8IYB5 467 aaPredicted RBP10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 AK7Q96M32 723 aa10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 GCC2Q8IWJ2 1684 aa10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 CENPJQ9HC77 1338 aaPredicted RBP10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 FRAT2O75474 233 aaPredicted RBP10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 CCDC34Q96HJ3 373 aa10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 DNAJC2Q99543 621 aaKnown RBP10.23□□□□□ -0.77
SNCAIP-201ENST00000261367 CCP110O43303 1012 aa10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 TCOF1Q13428 1488 aaKnown RBP10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 WASHC2CQ9Y4E1 1318 aa10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 CDK13Q14004 1512 aaKnown RBP10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
SNCAIP-201ENST00000261367 EHBP1L1Q8N3D4 1523 aa10.21□□□□□ -0.77
SNCAIP-201ENST00000261367 CCDC70Q6NSX1 233 aa10.21□□□□□ -0.77
SNCAIP-201ENST00000261367 ERCC4Q92889 916 aaPredicted RBP10.21□□□□□ -0.77
SNCAIP-201ENST00000261367 CEP170Q5SW79 1584 aa10.21□□□□□ -0.78
SNCAIP-201ENST00000261367 DEF6Q9H4E7 631 aa10.21□□□□□ -0.78
SNCAIP-201ENST00000261367 RDXP35241 583 aaKnown RBP10.21□□□□□ -0.78
SNCAIP-201ENST00000261367 TERF1P54274 439 aa10.21□□□□□ -0.78
SNCAIP-201ENST00000261367 NAIPQ13075 1403 aa10.2□□□□□ -0.78
SNCAIP-201ENST00000261367 E9PSI1 815 aa10.2□□□□□ -0.78
SNCAIP-201ENST00000261367 CRBNQ96SW2 442 aa10.2□□□□□ -0.78
SNCAIP-201ENST00000261367 EPRSP07814 1512 aaKnown RBP10.2□□□□□ -0.78
SNCAIP-201ENST00000261367 LEKR1Q6ZMV7 388 aa10.2□□□□□ -0.78
SNCAIP-201ENST00000261367 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
SNCAIP-201ENST00000261367 MYOM3Q5VTT5 1437 aa10.19□□□□□ -0.78
SNCAIP-201ENST00000261367 BRD4O60885 1362 aaPredicted RBP10.19□□□□□ -0.78
SNCAIP-201ENST00000261367 GOLGA6L19H0YKK7 550 aa10.19□□□□□ -0.78
SNCAIP-201ENST00000261367 HECW1Q76N89 1606 aa10.19□□□□□ -0.78
SNCAIP-201ENST00000261367 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
SNCAIP-201ENST00000261367 FAM184AQ8NB25 1140 aa10.18□□□□□ -0.78
SNCAIP-201ENST00000261367 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
SNCAIP-201ENST00000261367 HSP90B2PQ58FF3 399 aa10.18□□□□□ -0.78
SNCAIP-201ENST00000261367 NOC3LQ8WTT2 800 aaKnown RBP10.18□□□□□ -0.78
SNCAIP-201ENST00000261367 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 KIF20AO95235 890 aa10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 RBM10P98175 930 aaKnown RBP10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 MCM4P33991 863 aa10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 C22orf23Q9BZE7 217 aa10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
SNCAIP-201ENST00000261367 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 FAM107BQ9H098 131 aa10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 HS1BP3Q53T59 392 aa10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 CWC22Q9HCG8 908 aaKnown RBP10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 HMMRO75330 724 aa10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 TSPY26PQ9H489 355 aa10.16□□□□□ -0.78
SNCAIP-201ENST00000261367 REC8O95072 547 aa10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 TPM1P09493 284 aa10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 KCNJ4P48050 445 aa10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 MNS1Q8NEH6 495 aa10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 CGNQ9P2M7 1197 aaKnown RBP10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 CCDC18Q5T9S5 1454 aa10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 KIF2AO00139 706 aaPredicted RBP10.15□□□□□ -0.78
SNCAIP-201ENST00000261367 CDR1P51861 262 aa10.15□□□□□ -0.79
SNCAIP-201ENST00000261367 FOXD1Q16676 465 aa10.15□□□□□ -0.79
SNCAIP-201ENST00000261367 NBPF1Q3BBV0 1214 aa10.15□□□□□ -0.79
SNCAIP-201ENST00000261367 CCDC7Q96M83 1385 aa10.15□□□□□ -0.79
SNCAIP-201ENST00000261367 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
SNCAIP-201ENST00000261367 CHMP4AQ9BY43 222 aa10.14□□□□□ -0.79
SNCAIP-201ENST00000261367 MCM2P49736 904 aa10.14□□□□□ -0.79
SNCAIP-201ENST00000261367 FGD1P98174 961 aa10.14□□□□□ -0.79
SNCAIP-201ENST00000261367 ITPRIPQ8IWB1 547 aa10.14□□□□□ -0.79
SNCAIP-201ENST00000261367 TIGD1Q96MW7 591 aa10.14□□□□□ -0.79
SNCAIP-201ENST00000261367 RAPGEF6Q8TEU7 1601 aa10.13□□□□□ -0.79
SNCAIP-201ENST00000261367 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
SNCAIP-201ENST00000261367 ADCY10Q96PN6 1610 aa10.13□□□□□ -0.79
SNCAIP-201ENST00000261367 BECN2A8MW95 431 aa10.13□□□□□ -0.79
SNCAIP-201ENST00000261367 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
SNCAIP-201ENST00000261367 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
SNCAIP-201ENST00000261367 CCDC112Q8NEF3 446 aa10.12□□□□□ -0.79
SNCAIP-201ENST00000261367 DDX19BQ9UMR2 479 aa10.12□□□□□ -0.79
SNCAIP-201ENST00000261367 UACAQ9BZF9 1416 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 KIF14Q15058 1648 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 DNMT1P26358 1616 aaKnown RBP10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 ZBTB7CA1YPR0 619 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 EIF3JO75822 258 aaKnown RBP10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 CCDC94Q9BW85 323 aaPredicted RBP10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 CROCC2H7BZ55 1655 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 HDAC5Q9UQL6 1122 aa10.11□□□□□ -0.79
SNCAIP-201ENST00000261367 KIF7Q2M1P5 1343 aa10.1□□□□□ -0.79
SNCAIP-201ENST00000261367 ZKSCAN2Q63HK3 967 aa10.1□□□□□ -0.79
SNCAIP-201ENST00000261367 PLEKHH2Q8IVE3 1493 aa10.1□□□□□ -0.79
SNCAIP-201ENST00000261367 GNL2Q13823 731 aaKnown RBP10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 CCDC184Q52MB2 194 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 MIA2Q96PC5 1412 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 RABEP1Q15276 862 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 MCTP1Q6DN14 999 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 PDE3AQ14432 1141 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms