RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MYOM2P54296 1465 aa14.43□□□□□ -0.1
CHRNA1-201ENST00000261007 KIF1BO60333 1816 aa14.42□□□□□ -0.1
CHRNA1-201ENST00000261007 IQGAP1P46940 1657 aa14.42□□□□□ -0.1
CHRNA1-201ENST00000261007 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
CHRNA1-201ENST00000261007 TMF1P82094 1093 aa14.42□□□□□ -0.1
CHRNA1-201ENST00000261007 NBPF1Q3BBV0 1214 aa14.42□□□□□ -0.1
CHRNA1-201ENST00000261007 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
CHRNA1-201ENST00000261007 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 PPRC1Q5VV67 1664 aaKnown RBP14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 GLI2P10070 1586 aa14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 SCAF11Q99590 1463 aaKnown RBP14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 EIF3AQ14152 1382 aaKnown RBP14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 TESK2Q96S53 571 aa14.4□□□□□ -0.1
CHRNA1-201ENST00000261007 FRMPD1Q5SYB0 1578 aa14.38□□□□□ -0.11
CHRNA1-201ENST00000261007 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
CHRNA1-201ENST00000261007 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
CHRNA1-201ENST00000261007 IFT172Q9UG01 1749 aa14.36□□□□□ -0.11
CHRNA1-201ENST00000261007 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
CHRNA1-201ENST00000261007 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
CHRNA1-201ENST00000261007 TCERG1O14776 1098 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-201ENST00000261007 ADGRB3O60242 1522 aa14.35□□□□□ -0.11
CHRNA1-201ENST00000261007 ZC3H13Q5T200 1668 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-201ENST00000261007 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
CHRNA1-201ENST00000261007 NRXN1Q9ULB1 1477 aa14.34□□□□□ -0.11
CHRNA1-201ENST00000261007 RICTORQ6R327 1708 aa14.33□□□□□ -0.11
CHRNA1-201ENST00000261007 NLRP13Q86W25 1043 aa14.33□□□□□ -0.12
CHRNA1-201ENST00000261007 INSRP06213 1382 aa14.33□□□□□ -0.12
CHRNA1-201ENST00000261007 ABCC3O15438 1527 aa14.33□□□□□ -0.12
CHRNA1-201ENST00000261007 PNISRQ8TF01 805 aaKnown RBP14.33□□□□□ -0.12
CHRNA1-201ENST00000261007 LRPPRCP42704 1394 aaKnown RBP14.33□□□□□ -0.12
CHRNA1-201ENST00000261007 ZMYM4Q5VZL5 1548 aa14.32□□□□□ -0.12
CHRNA1-201ENST00000261007 DIP2CQ9Y2E4 1556 aa14.32□□□□□ -0.12
CHRNA1-201ENST00000261007 SYNMO15061 1565 aa14.32□□□□□ -0.12
CHRNA1-201ENST00000261007 PER1O15534 1290 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-201ENST00000261007 SETBP1Q9Y6X0 1596 aa14.31□□□□□ -0.12
CHRNA1-201ENST00000261007 NPATQ14207 1427 aa14.31□□□□□ -0.12
CHRNA1-201ENST00000261007 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
CHRNA1-201ENST00000261007 MS4A1P11836 297 aa14.31□□□□□ -0.12
CHRNA1-201ENST00000261007 CAMSAP1Q5T5Y3 1602 aa14.31□□□□□ -0.12
CHRNA1-201ENST00000261007 ANO8Q9HCE9 1232 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-201ENST00000261007 ARHGAP31Q2M1Z3 1444 aa14.3□□□□□ -0.12
CHRNA1-201ENST00000261007 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
CHRNA1-201ENST00000261007 PPM1GO15355 546 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-201ENST00000261007 UGGT1Q9NYU2 1555 aa14.29□□□□□ -0.12
CHRNA1-201ENST00000261007 MYO3AQ8NEV4 1616 aa14.28□□□□□ -0.12
CHRNA1-201ENST00000261007 NOS1P29475 1434 aa14.28□□□□□ -0.12
CHRNA1-201ENST00000261007 SBNO2Q9Y2G9 1366 aa14.28□□□□□ -0.12
CHRNA1-201ENST00000261007 KDM5AP29375 1690 aaKnown RBP14.28□□□□□ -0.12
CHRNA1-201ENST00000261007 PANK3Q9H999 370 aa14.27□□□□□ -0.12
CHRNA1-201ENST00000261007 PPLO60437 1756 aa14.27□□□□□ -0.12
CHRNA1-201ENST00000261007 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.13
CHRNA1-201ENST00000261007 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.13
CHRNA1-201ENST00000261007 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.13
CHRNA1-201ENST00000261007 GGT6Q6P531 493 aa14.27□□□□□ -0.13
CHRNA1-201ENST00000261007 NPC1L1Q9UHC9 1359 aa14.26□□□□□ -0.13
CHRNA1-201ENST00000261007 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
CHRNA1-201ENST00000261007 PDE4AP27815 886 aa14.25□□□□□ -0.13
CHRNA1-201ENST00000261007 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
CHRNA1-201ENST00000261007 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
CHRNA1-201ENST00000261007 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
CHRNA1-201ENST00000261007 RAPGEF3O95398 923 aa14.24□□□□□ -0.13
CHRNA1-201ENST00000261007 NEFMP07197 916 aa14.24□□□□□ -0.13
CHRNA1-201ENST00000261007 IL27Q8NEV9 243 aa14.24□□□□□ -0.13
CHRNA1-201ENST00000261007 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
CHRNA1-201ENST00000261007 ADGRF5Q8IZF2 1346 aa14.24□□□□□ -0.13
CHRNA1-201ENST00000261007 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
CHRNA1-201ENST00000261007 PIK3C2GO75747 1445 aa14.23□□□□□ -0.13
CHRNA1-201ENST00000261007 REREQ9P2R6 1566 aa14.23□□□□□ -0.13
CHRNA1-201ENST00000261007 CNGB1Q14028 1251 aaPredicted RBP14.23□□□□□ -0.13
CHRNA1-201ENST00000261007 ASXL1Q8IXJ9 1541 aa14.22□□□□□ -0.13
CHRNA1-201ENST00000261007 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
CHRNA1-201ENST00000261007 CFAP70Q5T0N1 1121 aa14.22□□□□□ -0.13
CHRNA1-201ENST00000261007 CYB5RLQ6IPT4 315 aa14.22□□□□□ -0.13
CHRNA1-201ENST00000261007 DDRGK1Q96HY6 314 aa14.22□□□□□ -0.13
CHRNA1-201ENST00000261007 MYOM1P52179 1685 aa14.22□□□□□ -0.13
CHRNA1-201ENST00000261007 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
CHRNA1-201ENST00000261007 SLC52A1Q9NWF4 448 aa14.2□□□□□ -0.14
CHRNA1-201ENST00000261007 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
CHRNA1-201ENST00000261007 CHGAP10645 457 aaKnown RBP14.2□□□□□ -0.14
CHRNA1-201ENST00000261007 ZFYVE9O95405 1425 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 SIGLEC1Q9BZZ2 1709 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 AGLP35573 1532 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 CC2D1BQ5T0F9 858 aaKnown RBP14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 EXOC6Q8TAG9 804 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 YEATS2Q9ULM3 1422 aa14.19□□□□□ -0.14
CHRNA1-201ENST00000261007 ADGRB1O14514 1584 aa14.18□□□□□ -0.14
CHRNA1-201ENST00000261007 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
CHRNA1-201ENST00000261007 CENPJQ9HC77 1338 aaPredicted RBP14.18□□□□□ -0.14
CHRNA1-201ENST00000261007 FAM69CQ0P6D2 419 aa14.17□□□□□ -0.14
CHRNA1-201ENST00000261007 CFAP65Q6ZU64 1925 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-201ENST00000261007 NEXMIFQ5QGS0 1516 aa14.17□□□□□ -0.14
CHRNA1-201ENST00000261007 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
CHRNA1-201ENST00000261007 PUS7Q96PZ0 661 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-201ENST00000261007 LAS1LQ9Y4W2 734 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms