RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 GPRASP1Q5JY77 1395 aa23.57■■□□□ 1.36
HLA-F-216ENST00000259951 TNRQ92752 1358 aa23.57■■□□□ 1.36
HLA-F-216ENST00000259951 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
HLA-F-216ENST00000259951 USP47Q96K76 1375 aa23.56■■□□□ 1.36
HLA-F-216ENST00000259951 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
HLA-F-216ENST00000259951 NEXMIFQ5QGS0 1516 aa23.55■■□□□ 1.36
HLA-F-216ENST00000259951 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
HLA-F-216ENST00000259951 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
HLA-F-216ENST00000259951 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
HLA-F-216ENST00000259951 ADAMTSL3P82987 1691 aa23.52■■□□□ 1.36
HLA-F-216ENST00000259951 ZFYVE9O95405 1425 aa23.52■■□□□ 1.36
HLA-F-216ENST00000259951 ADGRF5Q8IZF2 1346 aa23.5■■□□□ 1.35
HLA-F-216ENST00000259951 RIMS1Q86UR5 1692 aaKnown RBP23.5■■□□□ 1.35
HLA-F-216ENST00000259951 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
HLA-F-216ENST00000259951 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
HLA-F-216ENST00000259951 A2ML1A8K2U0 1454 aa23.49■■□□□ 1.35
HLA-F-216ENST00000259951 POLR1AO95602 1720 aaPredicted RBP23.48■■□□□ 1.35
HLA-F-216ENST00000259951 PIK3C2GO75747 1445 aa23.48■■□□□ 1.35
HLA-F-216ENST00000259951 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
HLA-F-216ENST00000259951 SETBP1Q9Y6X0 1596 aa23.45■■□□□ 1.34
HLA-F-216ENST00000259951 IQGAP1P46940 1657 aa23.45■■□□□ 1.34
HLA-F-216ENST00000259951 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
HLA-F-216ENST00000259951 HDGFP51858 240 aaKnown RBP23.42■■□□□ 1.34
HLA-F-216ENST00000259951 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
HLA-F-216ENST00000259951 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.41■■□□□ 1.34
HLA-F-216ENST00000259951 C14orf93Q9H972 538 aaKnown RBP23.41■■□□□ 1.34
HLA-F-216ENST00000259951 PTPRMP28827 1452 aa23.41■■□□□ 1.34
HLA-F-216ENST00000259951 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
HLA-F-216ENST00000259951 RIMS2Q9UQ26 1411 aa23.41■■□□□ 1.34
HLA-F-216ENST00000259951 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.34
HLA-F-216ENST00000259951 ST20-MTHFSA0A0A6YYL1 179 aa23.39■■□□□ 1.33
HLA-F-216ENST00000259951 MYO3AQ8NEV4 1616 aa23.38■■□□□ 1.33
HLA-F-216ENST00000259951 NUTM2DQ5VT03 806 aaPredicted RBP23.37■■□□□ 1.33
HLA-F-216ENST00000259951 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
HLA-F-216ENST00000259951 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
HLA-F-216ENST00000259951 WASHC2AQ641Q2 1341 aa23.36■■□□□ 1.33
HLA-F-216ENST00000259951 PLPPR3Q6T4P5 718 aa23.36■■□□□ 1.33
HLA-F-216ENST00000259951 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
HLA-F-216ENST00000259951 TMEM2Q9UHN6 1383 aa23.34■■□□□ 1.33
HLA-F-216ENST00000259951 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
HLA-F-216ENST00000259951 SLC24A1O60721 1099 aa23.31■■□□□ 1.32
HLA-F-216ENST00000259951 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
HLA-F-216ENST00000259951 C11orf95C9JLR9 678 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-216ENST00000259951 THEMISQ8N1K5 641 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-216ENST00000259951 CEP170BQ9Y4F5 1589 aaPredicted RBP23.29■■□□□ 1.32
HLA-F-216ENST00000259951 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
HLA-F-216ENST00000259951 SLIT1O75093 1534 aa23.28■■□□□ 1.32
HLA-F-216ENST00000259951 ZNF142P52746 1687 aaPredicted RBP23.28■■□□□ 1.32
HLA-F-216ENST00000259951 TESK2Q96S53 571 aa23.26■■□□□ 1.31
HLA-F-216ENST00000259951 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
HLA-F-216ENST00000259951 ARHGAP23Q9P227 1491 aa23.26■■□□□ 1.31
HLA-F-216ENST00000259951 TMF1P82094 1093 aa23.26■■□□□ 1.31
HLA-F-216ENST00000259951 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
HLA-F-216ENST00000259951 SETD1AO15047 1707 aaKnown RBP23.23■■□□□ 1.31
HLA-F-216ENST00000259951 NRXN3Q9Y4C0 1643 aa23.23■■□□□ 1.31
HLA-F-216ENST00000259951 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
HLA-F-216ENST00000259951 CDCA8Q53HL2 280 aa23.22■■□□□ 1.31
HLA-F-216ENST00000259951 ARHGEF28Q8N1W1 1705 aaKnown RBP23.21■■□□□ 1.31
HLA-F-216ENST00000259951 TXNDC2Q86VQ3 553 aa23.21■■□□□ 1.31
HLA-F-216ENST00000259951 CENPJQ9HC77 1338 aaPredicted RBP23.21■■□□□ 1.31
HLA-F-216ENST00000259951 PLEKHG1Q9ULL1 1385 aa23.21■■□□□ 1.31
HLA-F-216ENST00000259951 TRAK1Q9UPV9 953 aa23.21■■□□□ 1.31
HLA-F-216ENST00000259951 SBNO2Q9Y2G9 1366 aa23.21■■□□□ 1.31
HLA-F-216ENST00000259951 POLR3GLQ9BT43 218 aa23.19■■□□□ 1.3
HLA-F-216ENST00000259951 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
HLA-F-216ENST00000259951 YTHDC2Q9H6S0 1430 aaKnown RBP23.19■■□□□ 1.3
HLA-F-216ENST00000259951 MIER1Q8N108 512 aa23.18■■□□□ 1.3
HLA-F-216ENST00000259951 BCANQ96GW7 911 aa23.18■■□□□ 1.3
HLA-F-216ENST00000259951 DISP3Q9P2K9 1392 aa23.17■■□□□ 1.3
HLA-F-216ENST00000259951 LTKP29376 864 aa23.16■■□□□ 1.3
HLA-F-216ENST00000259951 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-216ENST00000259951 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.3
HLA-F-216ENST00000259951 DLC1Q96QB1 1528 aa23.14■■□□□ 1.29
HLA-F-216ENST00000259951 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
HLA-F-216ENST00000259951 ANP32CO43423 234 aa23.13■■□□□ 1.29
HLA-F-216ENST00000259951 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
HLA-F-216ENST00000259951 STK26Q9P289 416 aa23.12■■□□□ 1.29
HLA-F-216ENST00000259951 KNDC1Q76NI1 1749 aa23.12■■□□□ 1.29
HLA-F-216ENST00000259951 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
HLA-F-216ENST00000259951 ABCC11Q96J66 1382 aa23.11■■□□□ 1.29
HLA-F-216ENST00000259951 ANKLE2Q86XL3 938 aa23.09■■□□□ 1.29
HLA-F-216ENST00000259951 MED14O60244 1454 aa23.09■■□□□ 1.29
HLA-F-216ENST00000259951 METP08581 1390 aa23.08■■□□□ 1.28
HLA-F-216ENST00000259951 POGKQ9P215 609 aa23.08■■□□□ 1.28
HLA-F-216ENST00000259951 HSPA2P54652 639 aa23.07■■□□□ 1.28
HLA-F-216ENST00000259951 TBX22Q9Y458 520 aa23.07■■□□□ 1.28
HLA-F-216ENST00000259951 TECPR2O15040 1411 aa23.05■■□□□ 1.28
HLA-F-216ENST00000259951 SIRT1Q96EB6 747 aa23.05■■□□□ 1.28
HLA-F-216ENST00000259951 PUS7Q96PZ0 661 aaKnown RBP23.04■■□□□ 1.28
HLA-F-216ENST00000259951 PRAM1Q96QH2 718 aa23.04■■□□□ 1.28
HLA-F-216ENST00000259951 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
HLA-F-216ENST00000259951 CPS1P31327 1500 aa23.04■■□□□ 1.28
HLA-F-216ENST00000259951 FAM135BQ49AJ0 1406 aa23.03■■□□□ 1.28
HLA-F-216ENST00000259951 SLC26A8Q96RN1 970 aa23.01■■□□□ 1.27
HLA-F-216ENST00000259951 MYOM1P52179 1685 aa23.01■■□□□ 1.27
HLA-F-216ENST00000259951 PIK3R4Q99570 1358 aa23■■□□□ 1.27
HLA-F-216ENST00000259951 TULP4Q9NRJ4 1543 aa22.99■■□□□ 1.27
HLA-F-216ENST00000259951 SAFB2Q14151 953 aaKnown RBP eCLIP22.98■■□□□ 1.27
HLA-F-216ENST00000259951 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
HLA-F-216ENST00000259951 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms