RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ELL2O00472 640 aaPredicted RBP12.03□□□□□ -0.48
CKAP2-201ENST00000258607 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
CKAP2-201ENST00000258607 SLC26A8Q96RN1 970 aa12.03□□□□□ -0.48
CKAP2-201ENST00000258607 NOS1P29475 1434 aa12.03□□□□□ -0.48
CKAP2-201ENST00000258607 RALBP1Q15311 655 aa12.02□□□□□ -0.49
CKAP2-201ENST00000258607 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
CKAP2-201ENST00000258607 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.49
CKAP2-201ENST00000258607 NUTM2GQ5VZR2 741 aa12.02□□□□□ -0.49
CKAP2-201ENST00000258607 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-201ENST00000258607 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-201ENST00000258607 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
CKAP2-201ENST00000258607 ADGRL2O95490 1459 aa12□□□□□ -0.49
CKAP2-201ENST00000258607 MTHFSP49914 203 aa11.99□□□□□ -0.49
CKAP2-201ENST00000258607 CRBNQ96SW2 442 aa11.99□□□□□ -0.49
CKAP2-201ENST00000258607 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
CKAP2-201ENST00000258607 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
CKAP2-201ENST00000258607 YEATS2Q9ULM3 1422 aa11.99□□□□□ -0.49
CKAP2-201ENST00000258607 BCAR3O75815 825 aa11.98□□□□□ -0.49
CKAP2-201ENST00000258607 HMOX1P09601 288 aa11.98□□□□□ -0.49
CKAP2-201ENST00000258607 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
CKAP2-201ENST00000258607 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
CKAP2-201ENST00000258607 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
CKAP2-201ENST00000258607 CABP1Q9NZU7 370 aa11.96□□□□□ -0.49
CKAP2-201ENST00000258607 CDCA8Q53HL2 280 aa11.96□□□□□ -0.5
CKAP2-201ENST00000258607 TSPOAP1O95153 1857 aa11.96□□□□□ -0.5
CKAP2-201ENST00000258607 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
CKAP2-201ENST00000258607 PREX2Q70Z35 1606 aa11.95□□□□□ -0.5
CKAP2-201ENST00000258607 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
CKAP2-201ENST00000258607 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
CKAP2-201ENST00000258607 TSR2Q969E8 191 aaKnown RBP11.95□□□□□ -0.5
CKAP2-201ENST00000258607 ADCY10Q96PN6 1610 aa11.95□□□□□ -0.5
CKAP2-201ENST00000258607 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
CKAP2-201ENST00000258607 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
CKAP2-201ENST00000258607 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
CKAP2-201ENST00000258607 RRP1P56182 461 aaKnown RBP11.94□□□□□ -0.5
CKAP2-201ENST00000258607 TNNQ9UQP3 1299 aa11.94□□□□□ -0.5
CKAP2-201ENST00000258607 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
CKAP2-201ENST00000258607 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
CKAP2-201ENST00000258607 LTV1Q96GA3 475 aaPredicted RBP11.93□□□□□ -0.5
CKAP2-201ENST00000258607 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
CKAP2-201ENST00000258607 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
CKAP2-201ENST00000258607 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
CKAP2-201ENST00000258607 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
CKAP2-201ENST00000258607 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
CKAP2-201ENST00000258607 RRS1Q15050 365 aaKnown RBP11.92□□□□□ -0.5
CKAP2-201ENST00000258607 ATP10AO60312 1499 aa11.91□□□□□ -0.5
CKAP2-201ENST00000258607 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
CKAP2-201ENST00000258607 ATP7AQ04656 1500 aa11.9□□□□□ -0.5
CKAP2-201ENST00000258607 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
CKAP2-201ENST00000258607 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
CKAP2-201ENST00000258607 KDM5CP41229 1560 aa11.89□□□□□ -0.51
CKAP2-201ENST00000258607 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
CKAP2-201ENST00000258607 CDK19Q9BWU1 502 aa11.89□□□□□ -0.51
CKAP2-201ENST00000258607 ABCC1P33527 1531 aa11.89□□□□□ -0.51
CKAP2-201ENST00000258607 MSH5O43196 834 aa11.88□□□□□ -0.51
CKAP2-201ENST00000258607 NPATQ14207 1427 aa11.88□□□□□ -0.51
CKAP2-201ENST00000258607 MAGI2Q86UL8 1455 aa11.88□□□□□ -0.51
CKAP2-201ENST00000258607 BRD4O60885 1362 aaPredicted RBP11.88□□□□□ -0.51
CKAP2-201ENST00000258607 CROCC2H7BZ55 1655 aa11.88□□□□□ -0.51
CKAP2-201ENST00000258607 EIF3AQ14152 1382 aaKnown RBP11.88□□□□□ -0.51
CKAP2-201ENST00000258607 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
CKAP2-201ENST00000258607 APBB1O00213 710 aa11.87□□□□□ -0.51
CKAP2-201ENST00000258607 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
CKAP2-201ENST00000258607 KDM5DQ9BY66 1539 aa11.86□□□□□ -0.51
CKAP2-201ENST00000258607 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
CKAP2-201ENST00000258607 NME9Q86XW9 330 aa11.86□□□□□ -0.51
CKAP2-201ENST00000258607 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
CKAP2-201ENST00000258607 CLASP1Q7Z460 1538 aa11.86□□□□□ -0.51
CKAP2-201ENST00000258607 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
CKAP2-201ENST00000258607 ARXQ96QS3 562 aa11.85□□□□□ -0.51
CKAP2-201ENST00000258607 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
CKAP2-201ENST00000258607 ARHGEF5Q12774 1597 aa11.85□□□□□ -0.51
CKAP2-201ENST00000258607 MAPK8IP3Q9UPT6 1336 aa11.85□□□□□ -0.51
CKAP2-201ENST00000258607 MAST1Q9Y2H9 1570 aa11.84□□□□□ -0.51
CKAP2-201ENST00000258607 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
CKAP2-201ENST00000258607 UHRF1BP1Q6BDS2 1440 aa11.84□□□□□ -0.51
CKAP2-201ENST00000258607 SPRYD3Q8NCJ5 442 aa11.84□□□□□ -0.51
CKAP2-201ENST00000258607 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
CKAP2-201ENST00000258607 ZFYVE16Q7Z3T8 1539 aa11.84□□□□□ -0.51
CKAP2-201ENST00000258607 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
CKAP2-201ENST00000258607 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
CKAP2-201ENST00000258607 PARD3Q8TEW0 1356 aa11.82□□□□□ -0.52
CKAP2-201ENST00000258607 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
CKAP2-201ENST00000258607 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
CKAP2-201ENST00000258607 HDGFL2Q7Z4V5 671 aaPredicted RBP11.82□□□□□ -0.52
CKAP2-201ENST00000258607 NEFMP07197 916 aa11.82□□□□□ -0.52
CKAP2-201ENST00000258607 MIS18AQ9NYP9 233 aa11.81□□□□□ -0.52
CKAP2-201ENST00000258607 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
CKAP2-201ENST00000258607 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
CKAP2-201ENST00000258607 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
CKAP2-201ENST00000258607 CLTCL1P53675 1640 aa11.8□□□□□ -0.52
CKAP2-201ENST00000258607 RIPK4P57078 832 aa11.8□□□□□ -0.52
CKAP2-201ENST00000258607 DUSP27Q5VZP5 1158 aa11.8□□□□□ -0.52
CKAP2-201ENST00000258607 NGDNQ8NEJ9 315 aaKnown RBP11.79□□□□□ -0.52
CKAP2-201ENST00000258607 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
CKAP2-201ENST00000258607 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
CKAP2-201ENST00000258607 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
CKAP2-201ENST00000258607 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
CKAP2-201ENST00000258607 E9PCH4 1651 aa11.79□□□□□ -0.52
CKAP2-201ENST00000258607 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms