RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 FRAT2O75474 233 aaPredicted RBP6.07□□□□□ -1.44
USP44-201ENST00000258499 DUSP27Q5VZP5 1158 aa6.07□□□□□ -1.44
USP44-201ENST00000258499 ADAMTS12P58397 1594 aa6.07□□□□□ -1.44
USP44-201ENST00000258499 LRPPRCP42704 1394 aaKnown RBP6.07□□□□□ -1.44
USP44-201ENST00000258499 PARD3Q8TEW0 1356 aa6.07□□□□□ -1.44
USP44-201ENST00000258499 ATP10BO94823 1461 aa6.07□□□□□ -1.44
USP44-201ENST00000258499 DNMT1P26358 1616 aaKnown RBP6.06□□□□□ -1.44
USP44-201ENST00000258499 PLEKHH2Q8IVE3 1493 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 GCC2Q8IWJ2 1684 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 MFAP1P55081 439 aaKnown RBP6.06□□□□□ -1.44
USP44-201ENST00000258499 ITPRIPQ8IWB1 547 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 CCDC141Q6ZP82 1450 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 KIAA0556O60303 1618 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 SMC4Q9NTJ3 1288 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 POGKQ9P215 609 aa6.06□□□□□ -1.44
USP44-201ENST00000258499 CGNL1Q0VF96 1302 aa6.05□□□□□ -1.44
USP44-201ENST00000258499 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
USP44-201ENST00000258499 ANO8Q9HCE9 1232 aaPredicted RBP6.05□□□□□ -1.44
USP44-201ENST00000258499 KIF21AQ7Z4S6 1674 aa6.05□□□□□ -1.44
USP44-201ENST00000258499 PRAG1Q86YV5 1406 aa6.05□□□□□ -1.44
USP44-201ENST00000258499 TCP11L2Q8N4U5 519 aa6.05□□□□□ -1.44
USP44-201ENST00000258499 RWDD1Q9H446 243 aaPredicted RBP6.05□□□□□ -1.44
USP44-201ENST00000258499 MTHFSP49914 203 aa6.04□□□□□ -1.44
USP44-201ENST00000258499 AMER1Q5JTC6 1135 aaPredicted RBP6.04□□□□□ -1.44
USP44-201ENST00000258499 PMFBP1Q8TBY8 1022 aa6.04□□□□□ -1.44
USP44-201ENST00000258499 PLEKHH1Q9ULM0 1364 aa6.04□□□□□ -1.44
USP44-201ENST00000258499 MYH16Q9H6N6 1097 aa6.04□□□□□ -1.44
USP44-201ENST00000258499 SPINK5Q9NQ38 1064 aaPredicted RBP6.04□□□□□ -1.44
USP44-201ENST00000258499 KIF14Q15058 1648 aa6.04□□□□□ -1.44
USP44-201ENST00000258499 UHRF1BP1Q6BDS2 1440 aa6.03□□□□□ -1.44
USP44-201ENST00000258499 TARBP1Q13395 1621 aaKnown RBP6.03□□□□□ -1.44
USP44-201ENST00000258499 LRRIQ1Q96JM4 1722 aa6.03□□□□□ -1.44
USP44-201ENST00000258499 SP7Q8TDD2 431 aaPredicted RBP6.03□□□□□ -1.44
USP44-201ENST00000258499 ELL2O00472 640 aaPredicted RBP6.02□□□□□ -1.44
USP44-201ENST00000258499 IGHDP01880 384 aa6.02□□□□□ -1.44
USP44-201ENST00000258499 RUNDC1Q96C34 613 aa6.02□□□□□ -1.44
USP44-201ENST00000258499 FAM135AQ9P2D6 1515 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 WWC1Q8IX03 1113 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 TSR2Q969E8 191 aaKnown RBP6.02□□□□□ -1.45
USP44-201ENST00000258499 FOXD4L1Q9NU39 408 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 GGNBP2Q9H3C7 697 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 CABP2Q9NPB3 220 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 ADGRF5Q8IZF2 1346 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 ADGRL2O95490 1459 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 HSCBQ8IWL3 235 aa6.02□□□□□ -1.45
USP44-201ENST00000258499 HSP90AB1P08238 724 aaKnown RBP6.01□□□□□ -1.45
USP44-201ENST00000258499 ZKSCAN2Q63HK3 967 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP44-201ENST00000258499 SCAPERQ9BY12 1400 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 BCORL1Q5H9F3 1711 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 APBB1O00213 710 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 SOX12O15370 315 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 C8orf34Q49A92 452 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 PDZRN3Q9UPQ7 1066 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 MINK1Q8N4C8 1332 aaPredicted RBP6.01□□□□□ -1.45
USP44-201ENST00000258499 PBRM1Q86U86 1689 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 PDE3AQ14432 1141 aa6.01□□□□□ -1.45
USP44-201ENST00000258499 DZIP1LQ8IYY4 767 aaKnown RBP6.01□□□□□ -1.45
USP44-201ENST00000258499 A2MP01023 1474 aa6□□□□□ -1.45
USP44-201ENST00000258499 ARHGEF12Q9NZN5 1544 aa6□□□□□ -1.45
USP44-201ENST00000258499 TNNQ9UQP3 1299 aa6□□□□□ -1.45
USP44-201ENST00000258499 SYCP2Q9BX26 1530 aa6□□□□□ -1.45
USP44-201ENST00000258499 MBD5Q9P267 1494 aa6□□□□□ -1.45
USP44-201ENST00000258499 KDM5CP41229 1560 aa6□□□□□ -1.45
USP44-201ENST00000258499 NCLP19338 710 aaKnown RBP6□□□□□ -1.45
USP44-201ENST00000258499 ITSN2Q9NZM3 1697 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 MLECQ14165 292 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 NAP1L5Q96NT1 182 aaPredicted RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 LNPKQ9C0E8 428 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 COL17A1Q9UMD9 1497 aaPredicted RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 EXOSC9Q06265 439 aaKnown RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 STAC3Q96MF2 364 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 CARD14Q9BXL6 1004 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 IPO8O15397 1037 aaKnown RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 SEC24BO95487 1268 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 RARSP54136 660 aaKnown RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 RIPK4P57078 832 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 ANP32BQ92688 251 aaKnown RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 TRIM44Q96DX7 344 aaPredicted RBP5.99□□□□□ -1.45
USP44-201ENST00000258499 EVC2Q86UK5 1308 aa5.99□□□□□ -1.45
USP44-201ENST00000258499 L1TD1Q5T7N2 865 aaKnown RBP5.98□□□□□ -1.45
USP44-201ENST00000258499 NGEFQ8N5V2 710 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 ESF1Q9H501 851 aaKnown RBP5.98□□□□□ -1.45
USP44-201ENST00000258499 HDGFL2Q7Z4V5 671 aaPredicted RBP5.98□□□□□ -1.45
USP44-201ENST00000258499 NSD3Q9BZ95 1437 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 NKTRP30414 1462 aaKnown RBP5.98□□□□□ -1.45
USP44-201ENST00000258499 EIF4G3O43432 1585 aaKnown RBP5.98□□□□□ -1.45
USP44-201ENST00000258499 GOLGA6L3A6NEY3 463 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 TPRNQ4KMQ1 711 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 ANKRD45Q5TZF3 282 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 KDM2BQ8NHM5 1336 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 C22orf23Q9BZE7 217 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 SHANK2Q9UPX8 1470 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 PCDHB15Q9Y5E8 787 aa5.98□□□□□ -1.45
USP44-201ENST00000258499 PLEKHG5O94827 1062 aa5.97□□□□□ -1.45
USP44-201ENST00000258499 TERF2IPQ9NYB0 399 aa5.97□□□□□ -1.45
USP44-201ENST00000258499 SCAF11Q99590 1463 aaKnown RBP5.97□□□□□ -1.45
USP44-201ENST00000258499 TRAPPC8Q9Y2L5 1435 aa5.97□□□□□ -1.45
USP44-201ENST00000258499 VGFO15240 615 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms