RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 CENPQQ7L2Z9 268 aaPredicted RBP19.21■□□□□ 0.67
MSI1-201ENST00000257552 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
MSI1-201ENST00000257552 PLXNC1O60486 1568 aa19.21■□□□□ 0.67
MSI1-201ENST00000257552 PER1O15534 1290 aaPredicted RBP19.2■□□□□ 0.66
MSI1-201ENST00000257552 UNC13BO14795 1591 aa19.19■□□□□ 0.66
MSI1-201ENST00000257552 ADAMTS8Q9UP79 889 aa19.17■□□□□ 0.66
MSI1-201ENST00000257552 GGT6Q6P531 493 aa19.17■□□□□ 0.66
MSI1-201ENST00000257552 PANK3Q9H999 370 aa19.17■□□□□ 0.66
MSI1-201ENST00000257552 ZFYVE16Q7Z3T8 1539 aa19.16■□□□□ 0.66
MSI1-201ENST00000257552 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
MSI1-201ENST00000257552 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
MSI1-201ENST00000257552 RAPGEF3O95398 923 aa19.15■□□□□ 0.66
MSI1-201ENST00000257552 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
MSI1-201ENST00000257552 IQGAP3Q86VI3 1631 aa19.15■□□□□ 0.66
MSI1-201ENST00000257552 ARXQ96QS3 562 aa19.14■□□□□ 0.66
MSI1-201ENST00000257552 POGKQ9P215 609 aa19.14■□□□□ 0.65
MSI1-201ENST00000257552 FAM43AQ8N2R8 423 aa19.13■□□□□ 0.65
MSI1-201ENST00000257552 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
MSI1-201ENST00000257552 ATP7AQ04656 1500 aa19.12■□□□□ 0.65
MSI1-201ENST00000257552 KANK1Q14678 1352 aa19.11■□□□□ 0.65
MSI1-201ENST00000257552 DUSP27Q5VZP5 1158 aa19.11■□□□□ 0.65
MSI1-201ENST00000257552 SLKQ9H2G2 1235 aaPredicted RBP19.11■□□□□ 0.65
MSI1-201ENST00000257552 RTEL1-TNFRSF6BF6WH68 1400 aa19.1■□□□□ 0.65
MSI1-201ENST00000257552 CD109Q6YHK3 1445 aa19.1■□□□□ 0.65
MSI1-201ENST00000257552 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
MSI1-201ENST00000257552 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
MSI1-201ENST00000257552 TESK2Q96S53 571 aa19.09■□□□□ 0.65
MSI1-201ENST00000257552 ATP10AO60312 1499 aa19.08■□□□□ 0.64
MSI1-201ENST00000257552 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.64
MSI1-201ENST00000257552 ABCA9Q8IUA7 1624 aa19.08■□□□□ 0.64
MSI1-201ENST00000257552 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.64
MSI1-201ENST00000257552 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.07■□□□□ 0.64
MSI1-201ENST00000257552 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
MSI1-201ENST00000257552 UGGT1Q9NYU2 1555 aa19.06■□□□□ 0.64
MSI1-201ENST00000257552 GOLGA2Q08379 1002 aa19.06■□□□□ 0.64
MSI1-201ENST00000257552 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
MSI1-201ENST00000257552 E9PCH4 1651 aa19.05■□□□□ 0.64
MSI1-201ENST00000257552 SEC24BO95487 1268 aa19.05■□□□□ 0.64
MSI1-201ENST00000257552 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
MSI1-201ENST00000257552 RRAGDQ9NQL2 400 aaPredicted RBP19.04■□□□□ 0.64
MSI1-201ENST00000257552 ARAP3Q8WWN8 1544 aa19.04■□□□□ 0.64
MSI1-201ENST00000257552 TMF1P82094 1093 aa19.04■□□□□ 0.64
MSI1-201ENST00000257552 CFAP70Q5T0N1 1121 aa19.04■□□□□ 0.64
MSI1-201ENST00000257552 CCDC146Q8IYE0 955 aa19.04■□□□□ 0.64
MSI1-201ENST00000257552 BCAR3O75815 825 aa19.03■□□□□ 0.64
MSI1-201ENST00000257552 IGHDP01880 384 aa19.02■□□□□ 0.64
MSI1-201ENST00000257552 GPRASP1Q5JY77 1395 aa19.01■□□□□ 0.63
MSI1-201ENST00000257552 ADGRF5Q8IZF2 1346 aa19.01■□□□□ 0.63
MSI1-201ENST00000257552 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
MSI1-201ENST00000257552 USP19O94966 1318 aa19■□□□□ 0.63
MSI1-201ENST00000257552 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
MSI1-201ENST00000257552 ZMYM4Q5VZL5 1548 aa19■□□□□ 0.63
MSI1-201ENST00000257552 ZNF518AQ6AHZ1 1483 aa18.99■□□□□ 0.63
MSI1-201ENST00000257552 CFAP65Q6ZU64 1925 aaKnown RBP18.99■□□□□ 0.63
MSI1-201ENST00000257552 PPP2R1AP30153 589 aa18.99■□□□□ 0.63
MSI1-201ENST00000257552 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
MSI1-201ENST00000257552 CLTCL1P53675 1640 aa18.98■□□□□ 0.63
MSI1-201ENST00000257552 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
MSI1-201ENST00000257552 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
MSI1-201ENST00000257552 BECN1Q14457 450 aa18.96■□□□□ 0.63
MSI1-201ENST00000257552 PTPRTO14522 1441 aa18.96■□□□□ 0.63
MSI1-201ENST00000257552 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
MSI1-201ENST00000257552 TRPM2O94759 1503 aa18.95■□□□□ 0.62
MSI1-201ENST00000257552 KIDINS220Q9ULH0 1771 aa18.95■□□□□ 0.62
MSI1-201ENST00000257552 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
MSI1-201ENST00000257552 APAF1O14727 1248 aa18.94■□□□□ 0.62
MSI1-201ENST00000257552 PRDM15P57071 1507 aaPredicted RBP18.94■□□□□ 0.62
MSI1-201ENST00000257552 INSRP06213 1382 aa18.94■□□□□ 0.62
MSI1-201ENST00000257552 POGZQ7Z3K3 1410 aa18.94■□□□□ 0.62
MSI1-201ENST00000257552 COL17A1Q9UMD9 1497 aaPredicted RBP18.93■□□□□ 0.62
MSI1-201ENST00000257552 CANXP27824 592 aaKnown RBP18.93■□□□□ 0.62
MSI1-201ENST00000257552 L1TD1Q5T7N2 865 aaKnown RBP18.93■□□□□ 0.62
MSI1-201ENST00000257552 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
MSI1-201ENST00000257552 SPHKAPQ2M3C7 1700 aa18.92■□□□□ 0.62
MSI1-201ENST00000257552 TMEM132EQ6IEE7 984 aa18.92■□□□□ 0.62
MSI1-201ENST00000257552 PANK1Q8TE04 598 aa18.92■□□□□ 0.62
MSI1-201ENST00000257552 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
MSI1-201ENST00000257552 FAM69CQ0P6D2 419 aa18.91■□□□□ 0.62
MSI1-201ENST00000257552 MROH1Q8NDA8 1641 aa18.91■□□□□ 0.62
MSI1-201ENST00000257552 DEPDC5O75140 1603 aa18.9■□□□□ 0.62
MSI1-201ENST00000257552 TRAK1Q9UPV9 953 aa18.9■□□□□ 0.62
MSI1-201ENST00000257552 TET3O43151 1660 aa18.9■□□□□ 0.62
MSI1-201ENST00000257552 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
MSI1-201ENST00000257552 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.61
MSI1-201ENST00000257552 PANK2Q9BZ23 570 aa18.89■□□□□ 0.61
MSI1-201ENST00000257552 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
MSI1-201ENST00000257552 MADDQ8WXG6 1647 aa18.88■□□□□ 0.61
MSI1-201ENST00000257552 NPATQ14207 1427 aa18.88■□□□□ 0.61
MSI1-201ENST00000257552 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
MSI1-201ENST00000257552 AMER1Q5JTC6 1135 aaPredicted RBP18.87■□□□□ 0.61
MSI1-201ENST00000257552 CLUAP1Q96AJ1 413 aa18.87■□□□□ 0.61
MSI1-201ENST00000257552 ANTXR1Q9H6X2 564 aa18.87■□□□□ 0.61
MSI1-201ENST00000257552 VWDEQ8N2E2 1590 aa18.86■□□□□ 0.61
MSI1-201ENST00000257552 NOS1P29475 1434 aa18.86■□□□□ 0.61
MSI1-201ENST00000257552 GOLGA6L3A6NEY3 463 aa18.86■□□□□ 0.61
MSI1-201ENST00000257552 TBC1D2Q9BYX2 928 aa18.85■□□□□ 0.61
MSI1-201ENST00000257552 SCAF11Q99590 1463 aaKnown RBP18.85■□□□□ 0.61
MSI1-201ENST00000257552 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
MSI1-201ENST00000257552 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
MSI1-201ENST00000257552 UPF2Q9HAU5 1272 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms