RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 R3HCC1Q9Y3T6 440 aaKnown RBP15.53■□□□□ 0.08
USP30-201ENST00000257548 GRPEL1Q9HAV7 217 aa15.52■□□□□ 0.08
USP30-201ENST00000257548 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.07
USP30-201ENST00000257548 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.07
USP30-201ENST00000257548 MPNDQ8N594 471 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 KDM5BQ9UGL1 1544 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 PPP2R1AP30153 589 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 CDCA8Q53HL2 280 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 MORC1Q86VD1 984 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 SMC4Q9NTJ3 1288 aa15.52■□□□□ 0.07
USP30-201ENST00000257548 ANKRD30AQ9BXX3 1397 aa15.51■□□□□ 0.07
USP30-201ENST00000257548 E9PSI1 815 aa15.51■□□□□ 0.07
USP30-201ENST00000257548 SAFB2Q14151 953 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP30-201ENST00000257548 DDX11L8A8MPP1 907 aa15.5■□□□□ 0.07
USP30-201ENST00000257548 KIAA1211Q6ZU35 1233 aa15.5■□□□□ 0.07
USP30-201ENST00000257548 LNPKQ9C0E8 428 aa15.5■□□□□ 0.07
USP30-201ENST00000257548 MIA2Q96PC5 1412 aa15.49■□□□□ 0.07
USP30-201ENST00000257548 ARHGEF11O15085 1522 aa15.49■□□□□ 0.07
USP30-201ENST00000257548 RRP9O43818 475 aaKnown RBP15.49■□□□□ 0.07
USP30-201ENST00000257548 EIF4G3O43432 1585 aaKnown RBP15.48■□□□□ 0.07
USP30-201ENST00000257548 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
USP30-201ENST00000257548 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
USP30-201ENST00000257548 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
USP30-201ENST00000257548 CAMSAP2Q08AD1 1489 aa15.46■□□□□ 0.07
USP30-201ENST00000257548 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.07
USP30-201ENST00000257548 RPRD2Q5VT52 1461 aaKnown RBP15.46■□□□□ 0.07
USP30-201ENST00000257548 KIAA0556O60303 1618 aa15.46■□□□□ 0.07
USP30-201ENST00000257548 GPATCH8Q9UKJ3 1502 aaKnown RBP15.46■□□□□ 0.07
USP30-201ENST00000257548 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
USP30-201ENST00000257548 ELL2O00472 640 aaPredicted RBP15.45■□□□□ 0.06
USP30-201ENST00000257548 NASPP49321 788 aaPredicted RBP15.45■□□□□ 0.06
USP30-201ENST00000257548 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
USP30-201ENST00000257548 KIF14Q15058 1648 aa15.45■□□□□ 0.06
USP30-201ENST00000257548 CARMIL2Q6F5E8 1435 aa15.45■□□□□ 0.06
USP30-201ENST00000257548 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
USP30-201ENST00000257548 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
USP30-201ENST00000257548 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
USP30-201ENST00000257548 TNNQ9UQP3 1299 aa15.45■□□□□ 0.06
USP30-201ENST00000257548 RNF214Q8ND24 703 aa15.44■□□□□ 0.06
USP30-201ENST00000257548 PRDM10Q9NQV6 1147 aa15.43■□□□□ 0.06
USP30-201ENST00000257548 ANKRD45Q5TZF3 282 aa15.43■□□□□ 0.06
USP30-201ENST00000257548 CEP170Q5SW79 1584 aa15.42■□□□□ 0.06
USP30-201ENST00000257548 CCDC144AA2RUR9 1427 aa15.42■□□□□ 0.06
USP30-201ENST00000257548 PTPRGP23470 1445 aa15.42■□□□□ 0.06
USP30-201ENST00000257548 CLCN1P35523 988 aa15.42■□□□□ 0.06
USP30-201ENST00000257548 MCTP1Q6DN14 999 aa15.41■□□□□ 0.06
USP30-201ENST00000257548 BCL11BQ9C0K0 894 aaPredicted RBP15.41■□□□□ 0.06
USP30-201ENST00000257548 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
USP30-201ENST00000257548 RAPGEF6Q8TEU7 1601 aa15.4■□□□□ 0.06
USP30-201ENST00000257548 KDM2BQ8NHM5 1336 aa15.4■□□□□ 0.06
USP30-201ENST00000257548 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
USP30-201ENST00000257548 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
USP30-201ENST00000257548 PZPP20742 1482 aa15.39■□□□□ 0.05
USP30-201ENST00000257548 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
USP30-201ENST00000257548 PCDHB15Q9Y5E8 787 aa15.39■□□□□ 0.05
USP30-201ENST00000257548 ATP10BO94823 1461 aa15.39■□□□□ 0.05
USP30-201ENST00000257548 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
USP30-201ENST00000257548 TCP11L2Q8N4U5 519 aa15.39■□□□□ 0.05
USP30-201ENST00000257548 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
USP30-201ENST00000257548 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
USP30-201ENST00000257548 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
USP30-201ENST00000257548 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
USP30-201ENST00000257548 C9orf84Q5VXU9 1444 aa15.37■□□□□ 0.05
USP30-201ENST00000257548 ROCK1Q13464 1354 aa15.36■□□□□ 0.05
USP30-201ENST00000257548 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
USP30-201ENST00000257548 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
USP30-201ENST00000257548 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
USP30-201ENST00000257548 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
USP30-201ENST00000257548 NUTM2DQ5VT03 806 aaPredicted RBP15.35■□□□□ 0.05
USP30-201ENST00000257548 PER1O15534 1290 aaPredicted RBP15.35■□□□□ 0.05
USP30-201ENST00000257548 AFAP1Q8N556 730 aa15.35■□□□□ 0.05
USP30-201ENST00000257548 C1orf115Q9H7X2 142 aa15.35■□□□□ 0.05
USP30-201ENST00000257548 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
USP30-201ENST00000257548 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
USP30-201ENST00000257548 ZHX1Q9UKY1 873 aaPredicted RBP15.34■□□□□ 0.05
USP30-201ENST00000257548 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
USP30-201ENST00000257548 DISP3Q9P2K9 1392 aa15.33■□□□□ 0.05
USP30-201ENST00000257548 WWC1Q8IX03 1113 aa15.33■□□□□ 0.04
USP30-201ENST00000257548 RLBP1P12271 317 aa15.33■□□□□ 0.04
USP30-201ENST00000257548 SKOR2Q2VWA4 1001 aaPredicted RBP15.33■□□□□ 0.04
USP30-201ENST00000257548 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
USP30-201ENST00000257548 TPM2P07951 284 aa15.32■□□□□ 0.04
USP30-201ENST00000257548 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.32■□□□□ 0.04
USP30-201ENST00000257548 DNMT1P26358 1616 aaKnown RBP15.31■□□□□ 0.04
USP30-201ENST00000257548 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
USP30-201ENST00000257548 GCC2Q8IWJ2 1684 aa15.3■□□□□ 0.04
USP30-201ENST00000257548 UQCRHLA0A096LP55 91 aa15.3■□□□□ 0.04
USP30-201ENST00000257548 UQCRHP07919 91 aa15.3■□□□□ 0.04
USP30-201ENST00000257548 SSFA2P28290 1259 aa15.3■□□□□ 0.04
USP30-201ENST00000257548 MTHFSP49914 203 aa15.29■□□□□ 0.04
USP30-201ENST00000257548 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
USP30-201ENST00000257548 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
USP30-201ENST00000257548 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
USP30-201ENST00000257548 ZSCAN30Q86W11 494 aa15.29■□□□□ 0.04
USP30-201ENST00000257548 PDCL3Q9H2J4 239 aa15.29■□□□□ 0.04
USP30-201ENST00000257548 STK26Q9P289 416 aa15.29■□□□□ 0.04
USP30-201ENST00000257548 KIAA2012Q0VF49 1180 aa15.28■□□□□ 0.04
USP30-201ENST00000257548 PARD3Q8TEW0 1356 aa15.28■□□□□ 0.04
USP30-201ENST00000257548 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms