RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
PUM1-201ENST00000257075 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
PUM1-201ENST00000257075 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
PUM1-201ENST00000257075 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
PUM1-201ENST00000257075 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
PUM1-201ENST00000257075 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
PUM1-201ENST00000257075 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
PUM1-201ENST00000257075 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
PUM1-201ENST00000257075 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.3
PUM1-201ENST00000257075 TCEAL9Q9UHQ7 104 aa13.21□□□□□ -0.3
PUM1-201ENST00000257075 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
PUM1-201ENST00000257075 CUX1P39880 1505 aa13.2□□□□□ -0.3
PUM1-201ENST00000257075 TOPBP1Q92547 1522 aa13.2□□□□□ -0.3
PUM1-201ENST00000257075 USP47Q96K76 1375 aa13.2□□□□□ -0.3
PUM1-201ENST00000257075 CHAF1AQ13111 956 aaPredicted RBP13.2□□□□□ -0.3
PUM1-201ENST00000257075 DNTTIP2Q5QJE6 756 aaKnown RBP13.2□□□□□ -0.3
PUM1-201ENST00000257075 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
PUM1-201ENST00000257075 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
PUM1-201ENST00000257075 RIPK4P57078 832 aa13.19□□□□□ -0.3
PUM1-201ENST00000257075 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
PUM1-201ENST00000257075 PRAM1Q96QH2 718 aa13.19□□□□□ -0.3
PUM1-201ENST00000257075 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
PUM1-201ENST00000257075 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
PUM1-201ENST00000257075 KIF3AQ9Y496 699 aa13.18□□□□□ -0.3
PUM1-201ENST00000257075 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
PUM1-201ENST00000257075 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
PUM1-201ENST00000257075 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
PUM1-201ENST00000257075 FYCO1Q9BQS8 1478 aa13.18□□□□□ -0.3
PUM1-201ENST00000257075 FGD6Q6ZV73 1430 aa13.17□□□□□ -0.3
PUM1-201ENST00000257075 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
PUM1-201ENST00000257075 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
PUM1-201ENST00000257075 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
PUM1-201ENST00000257075 CD109Q6YHK3 1445 aa13.16□□□□□ -0.3
PUM1-201ENST00000257075 HMOX1P09601 288 aa13.16□□□□□ -0.3
PUM1-201ENST00000257075 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
PUM1-201ENST00000257075 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.37e-7■■■□□ 14.9
PUM1-201ENST00000257075 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
PUM1-201ENST00000257075 APPP05067 770 aa13.16□□□□□ -0.3
PUM1-201ENST00000257075 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
PUM1-201ENST00000257075 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
PUM1-201ENST00000257075 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
PUM1-201ENST00000257075 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
PUM1-201ENST00000257075 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
PUM1-201ENST00000257075 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
PUM1-201ENST00000257075 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
PUM1-201ENST00000257075 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
PUM1-201ENST00000257075 E9PSI1 815 aa13.15□□□□□ -0.3
PUM1-201ENST00000257075 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
PUM1-201ENST00000257075 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
PUM1-201ENST00000257075 GNAI1P63096 354 aa13.14□□□□□ -0.31
PUM1-201ENST00000257075 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
PUM1-201ENST00000257075 IFIT2P09913 472 aaKnown RBP13.14□□□□□ -0.31
PUM1-201ENST00000257075 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
PUM1-201ENST00000257075 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
PUM1-201ENST00000257075 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
PUM1-201ENST00000257075 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
PUM1-201ENST00000257075 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
PUM1-201ENST00000257075 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
PUM1-201ENST00000257075 CABP4P57796 275 aa13.12□□□□□ -0.31
PUM1-201ENST00000257075 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
PUM1-201ENST00000257075 APAF1O14727 1248 aa13.12□□□□□ -0.31
PUM1-201ENST00000257075 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
PUM1-201ENST00000257075 DIAPH3Q9NSV4 1193 aa13.12□□□□□ -0.31
PUM1-201ENST00000257075 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
PUM1-201ENST00000257075 NGLY1Q96IV0 654 aa13.11□□□□□ -0.31
PUM1-201ENST00000257075 KIF16BQ96L93 1317 aa13.11□□□□□ -0.31
PUM1-201ENST00000257075 TROQ12816 1431 aaPredicted RBP13.11□□□□□ -0.31
PUM1-201ENST00000257075 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
PUM1-201ENST00000257075 PRM3Q9NNZ6 103 aa13.1□□□□□ -0.31
PUM1-201ENST00000257075 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
PUM1-201ENST00000257075 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
PUM1-201ENST00000257075 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
PUM1-201ENST00000257075 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
PUM1-201ENST00000257075 MFAP1P55081 439 aaKnown RBP13.09□□□□□ -0.31
PUM1-201ENST00000257075 TRDNQ13061 729 aa13.09□□□□□ -0.31
PUM1-201ENST00000257075 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
PUM1-201ENST00000257075 RUNDC1Q96C34 613 aa13.09□□□□□ -0.31
PUM1-201ENST00000257075 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
PUM1-201ENST00000257075 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
PUM1-201ENST00000257075 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
PUM1-201ENST00000257075 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
PUM1-201ENST00000257075 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.31
PUM1-201ENST00000257075 PLIN1O60240 522 aa13.08□□□□□ -0.31
PUM1-201ENST00000257075 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.31
PUM1-201ENST00000257075 CCDC27Q2M243 656 aa13.08□□□□□ -0.31
PUM1-201ENST00000257075 NEUROD6Q96NK8 337 aa13.08□□□□□ -0.31
PUM1-201ENST00000257075 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
PUM1-201ENST00000257075 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
PUM1-201ENST00000257075 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
PUM1-201ENST00000257075 TPM4P67936 248 aa13.08□□□□□ -0.32
PUM1-201ENST00000257075 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
PUM1-201ENST00000257075 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
PUM1-201ENST00000257075 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
PUM1-201ENST00000257075 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.32
PUM1-201ENST00000257075 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
PUM1-201ENST00000257075 TOM1O60784 492 aa13.07□□□□□ -0.32
PUM1-201ENST00000257075 HFM1A2PYH4 1435 aa13.07□□□□□ -0.32
PUM1-201ENST00000257075 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
PUM1-201ENST00000257075 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
PUM1-201ENST00000257075 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms