RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.29
CCDC117-201ENST00000249064 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
CCDC117-201ENST00000249064 R3HCC1Q9Y3T6 440 aaKnown RBP16.83■□□□□ 0.28
CCDC117-201ENST00000249064 STAG3Q9UJ98 1225 aa16.83■□□□□ 0.28
CCDC117-201ENST00000249064 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
CCDC117-201ENST00000249064 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
CCDC117-201ENST00000249064 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
CCDC117-201ENST00000249064 PPP2R1AP30153 589 aa16.8■□□□□ 0.28
CCDC117-201ENST00000249064 DISP1Q96F81 1524 aa16.8■□□□□ 0.28
CCDC117-201ENST00000249064 TRAK2O60296 914 aa16.8■□□□□ 0.28
CCDC117-201ENST00000249064 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
CCDC117-201ENST00000249064 ESPNB1AK53 854 aa16.79■□□□□ 0.28
CCDC117-201ENST00000249064 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
CCDC117-201ENST00000249064 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
CCDC117-201ENST00000249064 ARHGAP5Q13017 1502 aa16.78■□□□□ 0.28
CCDC117-201ENST00000249064 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
CCDC117-201ENST00000249064 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
CCDC117-201ENST00000249064 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
CCDC117-201ENST00000249064 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
CCDC117-201ENST00000249064 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
CCDC117-201ENST00000249064 BCAR3O75815 825 aa16.78■□□□□ 0.28
CCDC117-201ENST00000249064 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
CCDC117-201ENST00000249064 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
CCDC117-201ENST00000249064 U2AF1L5P0DN76 240 aaPredicted RBP16.76■□□□□ 0.27
CCDC117-201ENST00000249064 U2AF1Q01081 240 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCDC117-201ENST00000249064 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
CCDC117-201ENST00000249064 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
CCDC117-201ENST00000249064 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
CCDC117-201ENST00000249064 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
CCDC117-201ENST00000249064 ATP10BO94823 1461 aa16.75■□□□□ 0.27
CCDC117-201ENST00000249064 MPNDQ8N594 471 aa16.74■□□□□ 0.27
CCDC117-201ENST00000249064 PANK1Q8TE04 598 aa16.74■□□□□ 0.27
CCDC117-201ENST00000249064 KANK1Q14678 1352 aa16.74■□□□□ 0.27
CCDC117-201ENST00000249064 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC117-201ENST00000249064 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
CCDC117-201ENST00000249064 MRE11P49959 708 aa16.73■□□□□ 0.27
CCDC117-201ENST00000249064 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
CCDC117-201ENST00000249064 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
CCDC117-201ENST00000249064 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
CCDC117-201ENST00000249064 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
CCDC117-201ENST00000249064 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
CCDC117-201ENST00000249064 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
CCDC117-201ENST00000249064 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
CCDC117-201ENST00000249064 KIF14Q15058 1648 aa16.72■□□□□ 0.27
CCDC117-201ENST00000249064 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.27
CCDC117-201ENST00000249064 BCORL1Q5H9F3 1711 aa16.71■□□□□ 0.27
CCDC117-201ENST00000249064 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.26
CCDC117-201ENST00000249064 PBRM1Q86U86 1689 aa16.7■□□□□ 0.26
CCDC117-201ENST00000249064 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
CCDC117-201ENST00000249064 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
CCDC117-201ENST00000249064 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
CCDC117-201ENST00000249064 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
CCDC117-201ENST00000249064 FOXD4L6Q3SYB3 417 aaPredicted RBP16.69■□□□□ 0.26
CCDC117-201ENST00000249064 FOXD4L3Q6VB84 417 aaPredicted RBP16.69■□□□□ 0.26
CCDC117-201ENST00000249064 TESK2Q96S53 571 aa16.69■□□□□ 0.26
CCDC117-201ENST00000249064 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
CCDC117-201ENST00000249064 MCM4P33991 863 aa16.67■□□□□ 0.26
CCDC117-201ENST00000249064 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
CCDC117-201ENST00000249064 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
CCDC117-201ENST00000249064 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
CCDC117-201ENST00000249064 MLECQ14165 292 aa16.65■□□□□ 0.26
CCDC117-201ENST00000249064 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
CCDC117-201ENST00000249064 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
CCDC117-201ENST00000249064 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
CCDC117-201ENST00000249064 E9PSI1 815 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 SOX12O15370 315 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 TPM2P07951 284 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 CLCN1P35523 988 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
CCDC117-201ENST00000249064 APBB1O00213 710 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 DUSP27Q5VZP5 1158 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 MTHFSP49914 203 aa16.62■□□□□ 0.25
CCDC117-201ENST00000249064 EIF3AQ14152 1382 aaKnown RBP16.61■□□□□ 0.25
CCDC117-201ENST00000249064 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
CCDC117-201ENST00000249064 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
CCDC117-201ENST00000249064 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
CCDC117-201ENST00000249064 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
CCDC117-201ENST00000249064 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
CCDC117-201ENST00000249064 PDCL3Q9H2J4 239 aa16.6■□□□□ 0.25
CCDC117-201ENST00000249064 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
CCDC117-201ENST00000249064 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
CCDC117-201ENST00000249064 ADGRF5Q8IZF2 1346 aa16.6■□□□□ 0.25
CCDC117-201ENST00000249064 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
CCDC117-201ENST00000249064 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
CCDC117-201ENST00000249064 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
CCDC117-201ENST00000249064 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
CCDC117-201ENST00000249064 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
CCDC117-201ENST00000249064 EIF4G3O43432 1585 aaKnown RBP16.59■□□□□ 0.25
CCDC117-201ENST00000249064 SEC24BO95487 1268 aa16.59■□□□□ 0.25
CCDC117-201ENST00000249064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC117-201ENST00000249064 GGNBP2Q9H3C7 697 aa16.59■□□□□ 0.25
CCDC117-201ENST00000249064 MINK1Q8N4C8 1332 aaPredicted RBP16.58■□□□□ 0.25
CCDC117-201ENST00000249064 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.25
CCDC117-201ENST00000249064 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
CCDC117-201ENST00000249064 XPCQ01831 940 aaPredicted RBP16.58■□□□□ 0.24
CCDC117-201ENST00000249064 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
CCDC117-201ENST00000249064 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
CCDC117-201ENST00000249064 LRPPRCP42704 1394 aaKnown RBP16.58■□□□□ 0.24
CCDC117-201ENST00000249064 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms