RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CCDC7Q96M83 1385 aa19.87■□□□□ 0.77
SDF2-201ENST00000247020 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
SDF2-201ENST00000247020 ZFYVE9O95405 1425 aa19.86■□□□□ 0.77
SDF2-201ENST00000247020 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
SDF2-201ENST00000247020 FER1L4A9Z1Z3 1794 aa19.85■□□□□ 0.77
SDF2-201ENST00000247020 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
SDF2-201ENST00000247020 IDI1Q13907 227 aa19.85■□□□□ 0.77
SDF2-201ENST00000247020 MLECQ14165 292 aa19.85■□□□□ 0.77
SDF2-201ENST00000247020 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
SDF2-201ENST00000247020 NBPF1Q3BBV0 1214 aa19.83■□□□□ 0.77
SDF2-201ENST00000247020 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.76
SDF2-201ENST00000247020 MIER1Q8N108 512 aa19.83■□□□□ 0.76
SDF2-201ENST00000247020 SCAF11Q99590 1463 aaKnown RBP19.82■□□□□ 0.76
SDF2-201ENST00000247020 ADGRF5Q8IZF2 1346 aa19.8■□□□□ 0.76
SDF2-201ENST00000247020 FBXO31Q5XUX0 539 aaPredicted RBP19.8■□□□□ 0.76
SDF2-201ENST00000247020 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
SDF2-201ENST00000247020 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
SDF2-201ENST00000247020 EIF3AQ14152 1382 aaKnown RBP19.79■□□□□ 0.76
SDF2-201ENST00000247020 C3P01024 1663 aa19.79■□□□□ 0.76
SDF2-201ENST00000247020 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
SDF2-201ENST00000247020 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
SDF2-201ENST00000247020 C11orf95C9JLR9 678 aaPredicted RBP19.78■□□□□ 0.76
SDF2-201ENST00000247020 A2ML1A8K2U0 1454 aa19.76■□□□□ 0.75
SDF2-201ENST00000247020 TNRQ92752 1358 aa19.75■□□□□ 0.75
SDF2-201ENST00000247020 ADGRB1O14514 1584 aa19.75■□□□□ 0.75
SDF2-201ENST00000247020 C14orf93Q9H972 538 aaKnown RBP19.74■□□□□ 0.75
SDF2-201ENST00000247020 SLC24A1O60721 1099 aa19.74■□□□□ 0.75
SDF2-201ENST00000247020 NLRP1Q9C000 1473 aa19.73■□□□□ 0.75
SDF2-201ENST00000247020 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
SDF2-201ENST00000247020 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
SDF2-201ENST00000247020 ANP32CO43423 234 aa19.7■□□□□ 0.74
SDF2-201ENST00000247020 TESK2Q96S53 571 aa19.7■□□□□ 0.74
SDF2-201ENST00000247020 STAG3Q9UJ98 1225 aa19.7■□□□□ 0.74
SDF2-201ENST00000247020 SBNO2Q9Y2G9 1366 aa19.69■□□□□ 0.74
SDF2-201ENST00000247020 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
SDF2-201ENST00000247020 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
SDF2-201ENST00000247020 TMF1P82094 1093 aa19.67■□□□□ 0.74
SDF2-201ENST00000247020 ARHGEF28Q8N1W1 1705 aaKnown RBP19.66■□□□□ 0.74
SDF2-201ENST00000247020 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
SDF2-201ENST00000247020 RIMS1Q86UR5 1692 aaKnown RBP19.65■□□□□ 0.74
SDF2-201ENST00000247020 SETD1AO15047 1707 aaKnown RBP19.64■□□□□ 0.74
SDF2-201ENST00000247020 ALKQ9UM73 1620 aa19.64■□□□□ 0.73
SDF2-201ENST00000247020 CCER2I3L3R5 266 aa19.64■□□□□ 0.73
SDF2-201ENST00000247020 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
SDF2-201ENST00000247020 CDCA8Q53HL2 280 aa19.64■□□□□ 0.73
SDF2-201ENST00000247020 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.73
SDF2-201ENST00000247020 DISP3Q9P2K9 1392 aa19.63■□□□□ 0.73
SDF2-201ENST00000247020 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
SDF2-201ENST00000247020 NRXN3Q9Y4C0 1643 aa19.6■□□□□ 0.73
SDF2-201ENST00000247020 TMEM2Q9UHN6 1383 aa19.59■□□□□ 0.73
SDF2-201ENST00000247020 SLIT1O75093 1534 aa19.59■□□□□ 0.73
SDF2-201ENST00000247020 CENPJQ9HC77 1338 aaPredicted RBP19.58■□□□□ 0.73
SDF2-201ENST00000247020 MYOM1P52179 1685 aa19.57■□□□□ 0.72
SDF2-201ENST00000247020 ZNF142P52746 1687 aaPredicted RBP19.57■□□□□ 0.72
SDF2-201ENST00000247020 NUTM2DQ5VT03 806 aaPredicted RBP19.57■□□□□ 0.72
SDF2-201ENST00000247020 ARHGAP23Q9P227 1491 aa19.57■□□□□ 0.72
SDF2-201ENST00000247020 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
SDF2-201ENST00000247020 KNDC1Q76NI1 1749 aa19.55■□□□□ 0.72
SDF2-201ENST00000247020 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
SDF2-201ENST00000247020 YTHDC2Q9H6S0 1430 aaKnown RBP19.55■□□□□ 0.72
SDF2-201ENST00000247020 KTN1Q86UP2 1357 aaKnown RBP19.55■□□□□ 0.72
SDF2-201ENST00000247020 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
SDF2-201ENST00000247020 SETD1BQ9UPS6 1966 aaKnown RBP19.54■□□□□ 0.72
SDF2-201ENST00000247020 PTPRMP28827 1452 aa19.54■□□□□ 0.72
SDF2-201ENST00000247020 CEP170BQ9Y4F5 1589 aaPredicted RBP19.54■□□□□ 0.72
SDF2-201ENST00000247020 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
SDF2-201ENST00000247020 TMEM132EQ6IEE7 984 aa19.53■□□□□ 0.72
SDF2-201ENST00000247020 TRAK1Q9UPV9 953 aa19.52■□□□□ 0.71
SDF2-201ENST00000247020 PUS7Q96PZ0 661 aaKnown RBP19.51■□□□□ 0.71
SDF2-201ENST00000247020 PLEKHG1Q9ULL1 1385 aa19.51■□□□□ 0.71
SDF2-201ENST00000247020 LRPPRCP42704 1394 aaKnown RBP19.49■□□□□ 0.71
SDF2-201ENST00000247020 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
SDF2-201ENST00000247020 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
SDF2-201ENST00000247020 ABCC11Q96J66 1382 aa19.47■□□□□ 0.71
SDF2-201ENST00000247020 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
SDF2-201ENST00000247020 TECPR2O15040 1411 aa19.46■□□□□ 0.71
SDF2-201ENST00000247020 CPS1P31327 1500 aa19.46■□□□□ 0.71
SDF2-201ENST00000247020 PER1O15534 1290 aaPredicted RBP19.45■□□□□ 0.7
SDF2-201ENST00000247020 EID1Q9Y6B2 187 aa19.45■□□□□ 0.7
SDF2-201ENST00000247020 TULP4Q9NRJ4 1543 aa19.45■□□□□ 0.7
SDF2-201ENST00000247020 MED14O60244 1454 aa19.45■□□□□ 0.7
SDF2-201ENST00000247020 ADAMTS13Q76LX8 1427 aa19.44■□□□□ 0.7
SDF2-201ENST00000247020 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
SDF2-201ENST00000247020 RALBP1Q15311 655 aa19.43■□□□□ 0.7
SDF2-201ENST00000247020 SIRT1Q96EB6 747 aa19.43■□□□□ 0.7
SDF2-201ENST00000247020 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
SDF2-201ENST00000247020 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
SDF2-201ENST00000247020 PANK3Q9H999 370 aa19.41■□□□□ 0.7
SDF2-201ENST00000247020 NPC1L1Q9UHC9 1359 aa19.4■□□□□ 0.7
SDF2-201ENST00000247020 NINLQ9Y2I6 1382 aa19.4■□□□□ 0.7
SDF2-201ENST00000247020 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
SDF2-201ENST00000247020 LTKP29376 864 aa19.4■□□□□ 0.7
SDF2-201ENST00000247020 METP08581 1390 aa19.39■□□□□ 0.69
SDF2-201ENST00000247020 STK26Q9P289 416 aa19.39■□□□□ 0.69
SDF2-201ENST00000247020 USP32Q8NFA0 1604 aa19.39■□□□□ 0.69
SDF2-201ENST00000247020 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
SDF2-201ENST00000247020 POGKQ9P215 609 aa19.38■□□□□ 0.69
SDF2-201ENST00000247020 PRAM1Q96QH2 718 aa19.37■□□□□ 0.69
SDF2-201ENST00000247020 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
SDF2-201ENST00000247020 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms