RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 MAP7D2Q96T17 732 aa8.21□□□□□ -1.09
CSMD2-201ENST00000241312 DCTN1Q14203 1278 aa8.21□□□□□ -1.09
CSMD2-201ENST00000241312 CCDC47Q96A33 483 aaKnown RBP8.21□□□□□ -1.1
CSMD2-201ENST00000241312 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.1
CSMD2-201ENST00000241312 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.21□□□□□ -1.1
CSMD2-201ENST00000241312 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 G3V3G9 751 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 DCAF8Q5TAQ9 597 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 GGT6Q6P531 493 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 RILPL2Q969X0 211 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 BICD2Q8TD16 824 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC73Q6ZRK6 1079 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 AMOTL1Q8IY63 956 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 AMPHP49418 695 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 ANKRD45Q5TZF3 282 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC39Q9UFE4 941 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 MNS1Q8NEH6 495 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 NUCB2P80303 420 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 IFT57Q9NWB7 429 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 EFCAB2Q5VUJ9 269 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 CUX1P39880 1505 aa8.2□□□□□ -1.1
CSMD2-201ENST00000241312 NEXNQ0ZGT2 675 aa8.19□□□□□ -1.1
CSMD2-201ENST00000241312 ANO2Q9NQ90 1003 aa8.19□□□□□ -1.1
CSMD2-201ENST00000241312 RDXP35241 583 aaKnown RBP8.19□□□□□ -1.1
CSMD2-201ENST00000241312 NUTM2DQ5VT03 806 aaPredicted RBP8.19□□□□□ -1.1
CSMD2-201ENST00000241312 NOL10Q9BSC4 688 aaKnown RBP8.19□□□□□ -1.1
CSMD2-201ENST00000241312 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
CSMD2-201ENST00000241312 L3MBTL2Q969R5 705 aa8.19□□□□□ -1.1
CSMD2-201ENST00000241312 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
CSMD2-201ENST00000241312 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
CSMD2-201ENST00000241312 EXOC6Q8TAG9 804 aa8.19□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC191Q8NCU4 936 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 CHMP5Q9NZZ3 219 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 NASPP49321 788 aaPredicted RBP8.18□□□□□ -1.1
CSMD2-201ENST00000241312 PCMTD1Q96MG8 357 aaPredicted RBP8.18□□□□□ -1.1
CSMD2-201ENST00000241312 CCP110O43303 1012 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 RAPGEF2Q9Y4G8 1499 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 MYO6Q9UM54 1294 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC66A2RUB6 948 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 NGDNQ8NEJ9 315 aaKnown RBP8.17□□□□□ -1.1
CSMD2-201ENST00000241312 HMGN5P82970 282 aaKnown RBP8.17□□□□□ -1.1
CSMD2-201ENST00000241312 C9orf78Q9NZ63 289 aaPredicted RBP8.17□□□□□ -1.1
CSMD2-201ENST00000241312 KIF7Q2M1P5 1343 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 EVC2Q86UK5 1308 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 COG3Q96JB2 828 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 FHOD3Q2V2M9 1422 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 NINLQ9Y2I6 1382 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 INTS3Q68E01 1043 aaKnown RBP8.17□□□□□ -1.1
CSMD2-201ENST00000241312 PDS5BQ9NTI5 1447 aa8.17□□□□□ -1.1
CSMD2-201ENST00000241312 SAFBQ15424 915 aaKnown RBP eCLIP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 IFIT2P09913 472 aaKnown RBP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 TRDNQ13061 729 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 WIZO95785 1651 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 VPS37CA5D8V6 355 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 ERC2O15083 957 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 PANK3Q9H999 370 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 SASS6Q6UVJ0 657 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 H0YHG0 523 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 NAP1L1P55209 391 aaKnown RBP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 ERCC4Q92889 916 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
CSMD2-201ENST00000241312 API5Q9BZZ5 524 aaKnown RBP8.16□□□□□ -1.1
CSMD2-201ENST00000241312 MRE11P49959 708 aa8.15□□□□□ -1.1
CSMD2-201ENST00000241312 CT47A1Q5JQC4 288 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC173Q0VFZ6 552 aa8.15□□□□□ -1.1
CSMD2-201ENST00000241312 TTC5Q8N0Z6 440 aa8.15□□□□□ -1.1
CSMD2-201ENST00000241312 CCDC43Q96MW1 224 aaKnown RBP8.15□□□□□ -1.1
CSMD2-201ENST00000241312 CECR2Q9BXF3 1484 aa8.15□□□□□ -1.11
CSMD2-201ENST00000241312 CAGE1Q8TC20 777 aa8.15□□□□□ -1.11
CSMD2-201ENST00000241312 PRKRIP1Q9H875 184 aaPredicted RBP8.15□□□□□ -1.11
CSMD2-201ENST00000241312 WASHC2CQ9Y4E1 1318 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 DHX8Q14562 1220 aaKnown RBP8.14□□□□□ -1.11
CSMD2-201ENST00000241312 SMC3Q9UQE7 1217 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
CSMD2-201ENST00000241312 MBD3O95983 291 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 HSP90AB4PQ58FF6 505 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 BRMS1Q9HCU9 246 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 EPS15P42566 896 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 FOSBP53539 338 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 COG6Q9Y2V7 657 aa8.14□□□□□ -1.11
CSMD2-201ENST00000241312 C22orf23Q9BZE7 217 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 FBXO3Q9UK99 471 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 MIA2Q96PC5 1412 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.13□□□□□ -1.11
CSMD2-201ENST00000241312 OLFM4Q6UX06 510 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 LETM1O95202 739 aaPredicted RBP8.13□□□□□ -1.11
CSMD2-201ENST00000241312 PDCP20941 246 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 CDC45O75419 566 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 APPP05067 770 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 DHX57Q6P158 1386 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms