RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
IFT43-201ENST00000238628 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
IFT43-201ENST00000238628 CCDC141Q6ZP82 1450 aa13.31□□□□□ -0.28
IFT43-201ENST00000238628 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
IFT43-201ENST00000238628 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
IFT43-201ENST00000238628 TET3O43151 1660 aa13.31□□□□□ -0.28
IFT43-201ENST00000238628 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
IFT43-201ENST00000238628 BRINP3Q76B58 766 aa13.29□□□□□ -0.28
IFT43-201ENST00000238628 C19orf44Q9H6X5 657 aa13.29□□□□□ -0.28
IFT43-201ENST00000238628 ADAMTS2O95450 1211 aa13.28□□□□□ -0.28
IFT43-201ENST00000238628 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
IFT43-201ENST00000238628 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
IFT43-201ENST00000238628 TRPC5Q9UL62 973 aaPredicted RBP13.28□□□□□ -0.28
IFT43-201ENST00000238628 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
IFT43-201ENST00000238628 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
IFT43-201ENST00000238628 USP21Q9UK80 565 aa13.27□□□□□ -0.29
IFT43-201ENST00000238628 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.29
IFT43-201ENST00000238628 PIK3C2BO00750 1634 aa13.27□□□□□ -0.29
IFT43-201ENST00000238628 LRP5O75197 1615 aa13.26□□□□□ -0.29
IFT43-201ENST00000238628 YY1P25490 414 aa13.26□□□□□ -0.29
IFT43-201ENST00000238628 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
IFT43-201ENST00000238628 EFCAB6Q5THR3 1501 aa13.26□□□□□ -0.29
IFT43-201ENST00000238628 CEP152O94986 1710 aa13.25□□□□□ -0.29
IFT43-201ENST00000238628 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
IFT43-201ENST00000238628 IDI1Q13907 227 aa13.25□□□□□ -0.29
IFT43-201ENST00000238628 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
IFT43-201ENST00000238628 ARHGEF5Q12774 1597 aa13.23□□□□□ -0.29
IFT43-201ENST00000238628 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
IFT43-201ENST00000238628 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
IFT43-201ENST00000238628 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
IFT43-201ENST00000238628 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
IFT43-201ENST00000238628 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
IFT43-201ENST00000238628 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
IFT43-201ENST00000238628 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
IFT43-201ENST00000238628 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
IFT43-201ENST00000238628 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
IFT43-201ENST00000238628 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
IFT43-201ENST00000238628 HRCP23327 699 aa13.19□□□□□ -0.3
IFT43-201ENST00000238628 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
IFT43-201ENST00000238628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
IFT43-201ENST00000238628 EIF2AK4Q9P2K8 1649 aaKnown RBP13.18□□□□□ -0.3
IFT43-201ENST00000238628 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
IFT43-201ENST00000238628 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
IFT43-201ENST00000238628 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
IFT43-201ENST00000238628 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
IFT43-201ENST00000238628 PLEKHG1Q9ULL1 1385 aa13.17□□□□□ -0.3
IFT43-201ENST00000238628 ATRNO75882 1429 aa13.16□□□□□ -0.3
IFT43-201ENST00000238628 EP400Q96L91 3159 aa13.14□□□□□ -0.31
IFT43-201ENST00000238628 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
IFT43-201ENST00000238628 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
IFT43-201ENST00000238628 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
IFT43-201ENST00000238628 SLC52A1Q9NWF4 448 aa13.12□□□□□ -0.31
IFT43-201ENST00000238628 AMOTL2Q9Y2J4 779 aa13.12□□□□□ -0.31
IFT43-201ENST00000238628 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
IFT43-201ENST00000238628 KANK1Q14678 1352 aa13.11□□□□□ -0.31
IFT43-201ENST00000238628 DUOX2Q9NRD8 1548 aa13.11□□□□□ -0.31
IFT43-201ENST00000238628 DCCP43146 1447 aa13.11□□□□□ -0.31
IFT43-201ENST00000238628 MST1RQ04912 1400 aa13.11□□□□□ -0.31
IFT43-201ENST00000238628 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
IFT43-201ENST00000238628 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
IFT43-201ENST00000238628 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
IFT43-201ENST00000238628 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
IFT43-201ENST00000238628 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
IFT43-201ENST00000238628 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
IFT43-201ENST00000238628 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
IFT43-201ENST00000238628 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
IFT43-201ENST00000238628 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
IFT43-201ENST00000238628 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
IFT43-201ENST00000238628 LOC105371045A0A1W2PR82 267 aa13.07□□□□□ -0.32
IFT43-201ENST00000238628 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
IFT43-201ENST00000238628 BAG6P46379 1132 aa13.07□□□□□ -0.32
IFT43-201ENST00000238628 BCL9LQ86UU0 1499 aa13.07□□□□□ -0.32
IFT43-201ENST00000238628 ADAMTS13Q76LX8 1427 aa13.06□□□□□ -0.32
IFT43-201ENST00000238628 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
IFT43-201ENST00000238628 NOS1P29475 1434 aa13.05□□□□□ -0.32
IFT43-201ENST00000238628 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
IFT43-201ENST00000238628 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
IFT43-201ENST00000238628 ABCC5O15440 1437 aa13.05□□□□□ -0.32
IFT43-201ENST00000238628 APLP2Q06481 763 aa13.03□□□□□ -0.32
IFT43-201ENST00000238628 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
IFT43-201ENST00000238628 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
IFT43-201ENST00000238628 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
IFT43-201ENST00000238628 UNC13BO14795 1591 aa13.03□□□□□ -0.32
IFT43-201ENST00000238628 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.32
IFT43-201ENST00000238628 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
IFT43-201ENST00000238628 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
IFT43-201ENST00000238628 PTPN23Q9H3S7 1636 aa13.01□□□□□ -0.33
IFT43-201ENST00000238628 MYO5BQ9ULV0 1848 aa13.01□□□□□ -0.33
IFT43-201ENST00000238628 TRPM2O94759 1503 aa13□□□□□ -0.33
IFT43-201ENST00000238628 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
IFT43-201ENST00000238628 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
IFT43-201ENST00000238628 DAPK1P53355 1430 aa13□□□□□ -0.33
IFT43-201ENST00000238628 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
IFT43-201ENST00000238628 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
IFT43-201ENST00000238628 ANKRD30AQ9BXX3 1397 aa12.99□□□□□ -0.33
IFT43-201ENST00000238628 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
IFT43-201ENST00000238628 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
IFT43-201ENST00000238628 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
IFT43-201ENST00000238628 ZNF784Q8NCA9 323 aaPredicted RBP12.97□□□□□ -0.33
IFT43-201ENST00000238628 GLI3P10071 1580 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms