RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 GOLGA6L19H0YKK7 550 aa15.66■□□□□ 0.1
VAMP4-201ENST00000236192 FEZ1Q99689 392 aa15.66■□□□□ 0.1
VAMP4-201ENST00000236192 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
VAMP4-201ENST00000236192 RNF20Q5VTR2 975 aa15.66■□□□□ 0.1
VAMP4-201ENST00000236192 MNS1Q8NEH6 495 aa15.66■□□□□ 0.1
VAMP4-201ENST00000236192 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
VAMP4-201ENST00000236192 KIF21BO75037 1637 aa15.65■□□□□ 0.1
VAMP4-201ENST00000236192 TNPO1Q92973 898 aaKnown RBP15.65■□□□□ 0.1
VAMP4-201ENST00000236192 USP47Q96K76 1375 aa15.65■□□□□ 0.1
VAMP4-201ENST00000236192 FAM184AQ8NB25 1140 aa15.64■□□□□ 0.1
VAMP4-201ENST00000236192 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
VAMP4-201ENST00000236192 OGFRQ9NZT2 677 aa15.64■□□□□ 0.09
VAMP4-201ENST00000236192 UACAQ9BZF9 1416 aa15.64■□□□□ 0.09
VAMP4-201ENST00000236192 PDZRN3Q9UPQ7 1066 aa15.64■□□□□ 0.09
VAMP4-201ENST00000236192 C8orf34Q49A92 452 aa15.63■□□□□ 0.09
VAMP4-201ENST00000236192 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
VAMP4-201ENST00000236192 KRT222Q8N1A0 295 aa15.63■□□□□ 0.09
VAMP4-201ENST00000236192 CWC22Q9HCG8 908 aaKnown RBP15.63■□□□□ 0.09
VAMP4-201ENST00000236192 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
VAMP4-201ENST00000236192 ACBD3Q9H3P7 528 aa15.62■□□□□ 0.09
VAMP4-201ENST00000236192 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
VAMP4-201ENST00000236192 NOL7Q9UMY1 257 aaKnown RBP15.62■□□□□ 0.09
VAMP4-201ENST00000236192 RBM25P49756 843 aaKnown RBP15.62■□□□□ 0.09
VAMP4-201ENST00000236192 RGL3Q3MIN7 710 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 HSP90B2PQ58FF3 399 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 GABPB1Q06547 395 aaPredicted RBP15.61■□□□□ 0.09
VAMP4-201ENST00000236192 ANKRD30AQ9BXX3 1397 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 LMOD3Q0VAK6 560 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 HOMER1Q86YM7 354 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
VAMP4-201ENST00000236192 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
VAMP4-201ENST00000236192 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
VAMP4-201ENST00000236192 FOXD4L6Q3SYB3 417 aaPredicted RBP15.6■□□□□ 0.09
VAMP4-201ENST00000236192 FOXD4L3Q6VB84 417 aaPredicted RBP15.6■□□□□ 0.09
VAMP4-201ENST00000236192 CCAR2Q8N163 923 aaKnown RBP15.59■□□□□ 0.09
VAMP4-201ENST00000236192 MPNDQ8N594 471 aa15.59■□□□□ 0.09
VAMP4-201ENST00000236192 GTF2F1P35269 517 aaKnown RBP eCLIP15.59■□□□□ 0.09
VAMP4-201ENST00000236192 NOL8Q76FK4 1167 aaKnown RBP15.59■□□□□ 0.09
VAMP4-201ENST00000236192 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
VAMP4-201ENST00000236192 BECN2A8MW95 431 aa15.58■□□□□ 0.09
VAMP4-201ENST00000236192 IGSF3O75054 1194 aa15.58■□□□□ 0.09
VAMP4-201ENST00000236192 SYCE3A1L190 88 aa15.58■□□□□ 0.08
VAMP4-201ENST00000236192 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.08
VAMP4-201ENST00000236192 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
VAMP4-201ENST00000236192 ANKRD45Q5TZF3 282 aa15.58■□□□□ 0.08
VAMP4-201ENST00000236192 TXLNBQ8N3L3 684 aa15.58■□□□□ 0.08
VAMP4-201ENST00000236192 H0YHG0 523 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 TSPY4P0CV99 314 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 TSPY10P0CW01 314 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 SPC24Q8NBT2 197 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 MYRIPQ8NFW9 859 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 GIMAP7Q8NHV1 300 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 NOLC1Q14978 699 aaKnown RBP eCLIP15.57■□□□□ 0.08
VAMP4-201ENST00000236192 RABEP1Q15276 862 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
VAMP4-201ENST00000236192 REC8O95072 547 aa15.56■□□□□ 0.08
VAMP4-201ENST00000236192 NOC3LQ8WTT2 800 aaKnown RBP15.56■□□□□ 0.08
VAMP4-201ENST00000236192 RASSF4Q9H2L5 321 aa15.55■□□□□ 0.08
VAMP4-201ENST00000236192 NPHP1O15259 732 aa15.55■□□□□ 0.08
VAMP4-201ENST00000236192 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
VAMP4-201ENST00000236192 FSD2A1L4K1 749 aa15.55■□□□□ 0.08
VAMP4-201ENST00000236192 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
VAMP4-201ENST00000236192 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
VAMP4-201ENST00000236192 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
VAMP4-201ENST00000236192 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
VAMP4-201ENST00000236192 TRIM5Q9C035 493 aa15.54■□□□□ 0.08
VAMP4-201ENST00000236192 ZSCAN23Q3MJ62 389 aa15.53■□□□□ 0.08
VAMP4-201ENST00000236192 ST20-MTHFSA0A0A6YYL1 179 aa15.53■□□□□ 0.08
VAMP4-201ENST00000236192 HDAC5Q9UQL6 1122 aa15.53■□□□□ 0.08
VAMP4-201ENST00000236192 BMS1Q14692 1282 aaKnown RBP15.53■□□□□ 0.08
VAMP4-201ENST00000236192 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
VAMP4-201ENST00000236192 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
VAMP4-201ENST00000236192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
VAMP4-201ENST00000236192 ZNF500O60304 480 aaPredicted RBP15.52■□□□□ 0.07
VAMP4-201ENST00000236192 CDC45O75419 566 aa15.52■□□□□ 0.07
VAMP4-201ENST00000236192 TMCO3Q6UWJ1 677 aa15.52■□□□□ 0.07
VAMP4-201ENST00000236192 BCL2L13Q9BXK5 485 aa15.51■□□□□ 0.07
VAMP4-201ENST00000236192 CCP110O43303 1012 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 TDO2P48775 406 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 UVSSAQ2YD98 709 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 C20orf194Q5TEA3 1177 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
VAMP4-201ENST00000236192 ERCC4Q92889 916 aaPredicted RBP15.5■□□□□ 0.07
VAMP4-201ENST00000236192 PANK3Q9H999 370 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 PAXBP1Q9Y5B6 917 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 APAF1O14727 1248 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 SLC26A8Q96RN1 970 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 SSFA2P28290 1259 aa15.5■□□□□ 0.07
VAMP4-201ENST00000236192 TNNT1P13805 278 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 PKD2Q13563 968 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.074e-6■□□□□ 9.9
VAMP4-201ENST00000236192 APBB1O00213 710 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 CCDC91Q7Z6B0 441 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 PPP1R9BQ96SB3 815 aa15.49■□□□□ 0.07
VAMP4-201ENST00000236192 TPM1P09493 284 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms