RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
MDH1-201ENST00000233114 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
MDH1-201ENST00000233114 BRD4O60885 1362 aaPredicted RBP13.43□□□□□ -0.26
MDH1-201ENST00000233114 RALBP1Q15311 655 aa13.43□□□□□ -0.26
MDH1-201ENST00000233114 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
MDH1-201ENST00000233114 DEPDC5O75140 1603 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 ST20-MTHFSA0A0A6YYL1 179 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 COL17A1Q9UMD9 1497 aaPredicted RBP13.41□□□□□ -0.26
MDH1-201ENST00000233114 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 ZFYVE16Q7Z3T8 1539 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 NEURL4Q96JN8 1562 aa13.41□□□□□ -0.26
MDH1-201ENST00000233114 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
MDH1-201ENST00000233114 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
MDH1-201ENST00000233114 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
MDH1-201ENST00000233114 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
MDH1-201ENST00000233114 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
MDH1-201ENST00000233114 TRPM2O94759 1503 aa13.39□□□□□ -0.27
MDH1-201ENST00000233114 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
MDH1-201ENST00000233114 INSRP06213 1382 aa13.39□□□□□ -0.27
MDH1-201ENST00000233114 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
MDH1-201ENST00000233114 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
MDH1-201ENST00000233114 TRAPPC8Q9Y2L5 1435 aa13.38□□□□□ -0.27
MDH1-201ENST00000233114 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
MDH1-201ENST00000233114 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
MDH1-201ENST00000233114 TET3O43151 1660 aa13.38□□□□□ -0.27
MDH1-201ENST00000233114 INO80Q9ULG1 1556 aaPredicted RBP13.38□□□□□ -0.27
MDH1-201ENST00000233114 CEP152O94986 1710 aa13.37□□□□□ -0.27
MDH1-201ENST00000233114 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
MDH1-201ENST00000233114 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
MDH1-201ENST00000233114 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
MDH1-201ENST00000233114 PTPRTO14522 1441 aa13.36□□□□□ -0.27
MDH1-201ENST00000233114 PARD3Q8TEW0 1356 aa13.36□□□□□ -0.27
MDH1-201ENST00000233114 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
MDH1-201ENST00000233114 SPAG9O60271 1321 aaKnown RBP13.35□□□□□ -0.27
MDH1-201ENST00000233114 RNF123Q5XPI4 1314 aa13.35□□□□□ -0.27
MDH1-201ENST00000233114 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
MDH1-201ENST00000233114 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
MDH1-201ENST00000233114 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
MDH1-201ENST00000233114 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
MDH1-201ENST00000233114 ATP7AQ04656 1500 aa13.34□□□□□ -0.27
MDH1-201ENST00000233114 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
MDH1-201ENST00000233114 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.27
MDH1-201ENST00000233114 IQGAP1P46940 1657 aa13.33□□□□□ -0.28
MDH1-201ENST00000233114 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
MDH1-201ENST00000233114 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
MDH1-201ENST00000233114 TESK2Q96S53 571 aa13.31□□□□□ -0.28
MDH1-201ENST00000233114 RBM19Q9Y4C8 960 aaKnown RBP13.31□□□□□ -0.28
MDH1-201ENST00000233114 KANK1Q14678 1352 aa13.31□□□□□ -0.28
MDH1-201ENST00000233114 FANCAO15360 1455 aa13.31□□□□□ -0.28
MDH1-201ENST00000233114 TMF1P82094 1093 aa13.3□□□□□ -0.28
MDH1-201ENST00000233114 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
MDH1-201ENST00000233114 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
MDH1-201ENST00000233114 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
MDH1-201ENST00000233114 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
MDH1-201ENST00000233114 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
MDH1-201ENST00000233114 DISP3Q9P2K9 1392 aa13.28□□□□□ -0.28
MDH1-201ENST00000233114 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
MDH1-201ENST00000233114 ADGRL1O94910 1474 aa13.27□□□□□ -0.28
MDH1-201ENST00000233114 SCAF11Q99590 1463 aaKnown RBP13.27□□□□□ -0.28
MDH1-201ENST00000233114 LMTK2Q8IWU2 1503 aa13.27□□□□□ -0.29
MDH1-201ENST00000233114 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.29
MDH1-201ENST00000233114 SYNMO15061 1565 aa13.27□□□□□ -0.29
MDH1-201ENST00000233114 MYOM2P54296 1465 aa13.26□□□□□ -0.29
MDH1-201ENST00000233114 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
MDH1-201ENST00000233114 MROH1Q8NDA8 1641 aa13.26□□□□□ -0.29
MDH1-201ENST00000233114 FANCIQ9NVI1 1328 aa13.26□□□□□ -0.29
MDH1-201ENST00000233114 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
MDH1-201ENST00000233114 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
MDH1-201ENST00000233114 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
MDH1-201ENST00000233114 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
MDH1-201ENST00000233114 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
MDH1-201ENST00000233114 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
MDH1-201ENST00000233114 AFAP1Q8N556 730 aa13.23□□□□□ -0.29
MDH1-201ENST00000233114 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
MDH1-201ENST00000233114 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
MDH1-201ENST00000233114 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
MDH1-201ENST00000233114 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
MDH1-201ENST00000233114 KIDINS220Q9ULH0 1771 aa13.22□□□□□ -0.29
MDH1-201ENST00000233114 KIF1BO60333 1816 aa13.22□□□□□ -0.29
MDH1-201ENST00000233114 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.29
MDH1-201ENST00000233114 PANK3Q9H999 370 aa13.19□□□□□ -0.3
MDH1-201ENST00000233114 KDM5AP29375 1690 aaKnown RBP13.19□□□□□ -0.3
MDH1-201ENST00000233114 MYO3AQ8NEV4 1616 aa13.19□□□□□ -0.3
MDH1-201ENST00000233114 NRXN1Q9ULB1 1477 aa13.19□□□□□ -0.3
MDH1-201ENST00000233114 MYOM1P52179 1685 aa13.18□□□□□ -0.3
MDH1-201ENST00000233114 PPRC1Q5VV67 1664 aaKnown RBP13.18□□□□□ -0.3
MDH1-201ENST00000233114 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 MLH3Q9UHC1 1453 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 KIF3BO15066 747 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
MDH1-201ENST00000233114 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
MDH1-201ENST00000233114 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
MDH1-201ENST00000233114 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
MDH1-201ENST00000233114 ADGRB3O60242 1522 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms