RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
PCDHB6-201ENST00000231136 HNRNPUQ00839 825 aaKnown RBP eCLIP17.87■□□□□ 0.45
PCDHB6-201ENST00000231136 NEFLP07196 543 aa17.86■□□□□ 0.45
PCDHB6-201ENST00000231136 IRX6P78412 446 aaPredicted RBP17.86■□□□□ 0.45
PCDHB6-201ENST00000231136 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
PCDHB6-201ENST00000231136 MROH2AA6NES4 1674 aa17.85■□□□□ 0.45
PCDHB6-201ENST00000231136 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
PCDHB6-201ENST00000231136 TRPM1Q7Z4N2 1603 aa17.85■□□□□ 0.45
PCDHB6-201ENST00000231136 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
PCDHB6-201ENST00000231136 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
PCDHB6-201ENST00000231136 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.44
PCDHB6-201ENST00000231136 CC2D1BQ5T0F9 858 aaKnown RBP17.82■□□□□ 0.44
PCDHB6-201ENST00000231136 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
PCDHB6-201ENST00000231136 SYNMO15061 1565 aa17.82■□□□□ 0.44
PCDHB6-201ENST00000231136 PANK3Q9H999 370 aa17.8■□□□□ 0.44
PCDHB6-201ENST00000231136 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
PCDHB6-201ENST00000231136 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
PCDHB6-201ENST00000231136 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
PCDHB6-201ENST00000231136 MADDQ8WXG6 1647 aa17.79■□□□□ 0.44
PCDHB6-201ENST00000231136 TMF1P82094 1093 aa17.78■□□□□ 0.44
PCDHB6-201ENST00000231136 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
PCDHB6-201ENST00000231136 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
PCDHB6-201ENST00000231136 KIF1BO60333 1816 aa17.76■□□□□ 0.43
PCDHB6-201ENST00000231136 C14orf93Q9H972 538 aaKnown RBP17.75■□□□□ 0.43
PCDHB6-201ENST00000231136 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
PCDHB6-201ENST00000231136 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
PCDHB6-201ENST00000231136 ADGRB3O60242 1522 aa17.74■□□□□ 0.43
PCDHB6-201ENST00000231136 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
PCDHB6-201ENST00000231136 ERVK-7P63135 1459 aa17.72■□□□□ 0.43
PCDHB6-201ENST00000231136 ARHGEF40Q8TER5 1519 aa17.72■□□□□ 0.43
PCDHB6-201ENST00000231136 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
PCDHB6-201ENST00000231136 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
PCDHB6-201ENST00000231136 MYO5BQ9ULV0 1848 aa17.71■□□□□ 0.43
PCDHB6-201ENST00000231136 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
PCDHB6-201ENST00000231136 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 MINK1Q8N4C8 1332 aaPredicted RBP17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 PREX1Q8TCU6 1659 aa17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 PER1O15534 1290 aaPredicted RBP17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 SALL2Q9Y467 1007 aaPredicted RBP17.69■□□□□ 0.42
PCDHB6-201ENST00000231136 PIK3C2BO00750 1634 aa17.68■□□□□ 0.42
PCDHB6-201ENST00000231136 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
PCDHB6-201ENST00000231136 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
PCDHB6-201ENST00000231136 AGLP35573 1532 aa17.66■□□□□ 0.42
PCDHB6-201ENST00000231136 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
PCDHB6-201ENST00000231136 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
PCDHB6-201ENST00000231136 RPGRIP1LQ68CZ1 1315 aa17.66■□□□□ 0.42
PCDHB6-201ENST00000231136 TNNT2P45379 298 aaPredicted RBP17.66■□□□□ 0.42
PCDHB6-201ENST00000231136 MYOM2P54296 1465 aa17.65■□□□□ 0.42
PCDHB6-201ENST00000231136 NEXMIFQ5QGS0 1516 aa17.65■□□□□ 0.42
PCDHB6-201ENST00000231136 LTKP29376 864 aa17.64■□□□□ 0.41
PCDHB6-201ENST00000231136 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
PCDHB6-201ENST00000231136 POGKQ9P215 609 aa17.64■□□□□ 0.41
PCDHB6-201ENST00000231136 NUTM2FA1L443 756 aa17.63■□□□□ 0.41
PCDHB6-201ENST00000231136 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
PCDHB6-201ENST00000231136 TNRQ92752 1358 aa17.62■□□□□ 0.41
PCDHB6-201ENST00000231136 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
PCDHB6-201ENST00000231136 PPLO60437 1756 aa17.62■□□□□ 0.41
PCDHB6-201ENST00000231136 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
PCDHB6-201ENST00000231136 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
PCDHB6-201ENST00000231136 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
PCDHB6-201ENST00000231136 NRXN1Q9ULB1 1477 aa17.61■□□□□ 0.41
PCDHB6-201ENST00000231136 RIMS2Q9UQ26 1411 aa17.61■□□□□ 0.41
PCDHB6-201ENST00000231136 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
PCDHB6-201ENST00000231136 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
PCDHB6-201ENST00000231136 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
PCDHB6-201ENST00000231136 EIF3AQ14152 1382 aaKnown RBP17.6■□□□□ 0.41
PCDHB6-201ENST00000231136 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
PCDHB6-201ENST00000231136 RBM33Q96EV2 1170 aaKnown RBP17.59■□□□□ 0.41
PCDHB6-201ENST00000231136 PLEKHH1Q9ULM0 1364 aa17.59■□□□□ 0.41
PCDHB6-201ENST00000231136 NCKAP5LQ9HCH0 1330 aa17.58■□□□□ 0.41
PCDHB6-201ENST00000231136 IQGAP1P46940 1657 aa17.58■□□□□ 0.41
PCDHB6-201ENST00000231136 ADGRB1O14514 1584 aa17.58■□□□□ 0.4
PCDHB6-201ENST00000231136 REREQ9P2R6 1566 aa17.58■□□□□ 0.4
PCDHB6-201ENST00000231136 METP08581 1390 aa17.57■□□□□ 0.4
PCDHB6-201ENST00000231136 POLR1AO95602 1720 aaPredicted RBP17.56■□□□□ 0.4
PCDHB6-201ENST00000231136 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
PCDHB6-201ENST00000231136 ASXL1Q8IXJ9 1541 aa17.54■□□□□ 0.4
PCDHB6-201ENST00000231136 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
PCDHB6-201ENST00000231136 SPATA31D1Q6ZQQ2 1576 aa17.54■□□□□ 0.4
PCDHB6-201ENST00000231136 PNISRQ8TF01 805 aaKnown RBP17.53■□□□□ 0.4
PCDHB6-201ENST00000231136 LAMC1P11047 1609 aa17.52■□□□□ 0.4
PCDHB6-201ENST00000231136 CDCA8Q53HL2 280 aa17.52■□□□□ 0.4
PCDHB6-201ENST00000231136 YTHDC2Q9H6S0 1430 aaKnown RBP17.52■□□□□ 0.39
PCDHB6-201ENST00000231136 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
PCDHB6-201ENST00000231136 FBLN1P23142 703 aa17.51■□□□□ 0.39
PCDHB6-201ENST00000231136 PTPRMP28827 1452 aa17.51■□□□□ 0.39
PCDHB6-201ENST00000231136 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
PCDHB6-201ENST00000231136 NEURL4Q96JN8 1562 aa17.5■□□□□ 0.39
PCDHB6-201ENST00000231136 TMEM2Q9UHN6 1383 aa17.49■□□□□ 0.39
PCDHB6-201ENST00000231136 ALKQ9UM73 1620 aa17.49■□□□□ 0.39
PCDHB6-201ENST00000231136 RALBP1Q15311 655 aa17.49■□□□□ 0.39
PCDHB6-201ENST00000231136 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
PCDHB6-201ENST00000231136 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
PCDHB6-201ENST00000231136 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
PCDHB6-201ENST00000231136 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
PCDHB6-201ENST00000231136 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
PCDHB6-201ENST00000231136 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
PCDHB6-201ENST00000231136 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms